RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 PIK3R4Q99570 1358 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 TXNDC2Q86VQ3 553 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 C1orf115Q9H7X2 142 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 PTCH1Q13635 1447 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 FAM83GA6ND36 823 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 RRS1Q15050 365 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 LNPKQ9C0E8 428 aa10.7□□□□□ -0.7
CTNNA1-210ENST00000518825 CDK12Q9NYV4 1490 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-210ENST00000518825 ELL2O00472 640 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-210ENST00000518825 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-210ENST00000518825 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
CTNNA1-210ENST00000518825 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
CTNNA1-210ENST00000518825 IPO8O15397 1037 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 MLECQ14165 292 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 CHD1LQ86WJ1 897 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 C3P01024 1663 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 PRR36Q9H6K5 1346 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 KNDC1Q76NI1 1749 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 AATKQ6ZMQ8 1374 aa10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 NUDT16Q96DE0 195 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-210ENST00000518825 DCTN1Q14203 1278 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 IFT57Q9NWB7 429 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 ABCC4O15439 1325 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 KIF2CQ99661 725 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
CTNNA1-210ENST00000518825 DDIT3P35638 169 aa10.66□□□□□ -0.7
CTNNA1-210ENST00000518825 ARHGAP45Q92619 1136 aa10.66□□□□□ -0.7
CTNNA1-210ENST00000518825 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
CTNNA1-210ENST00000518825 ANO8Q9HCE9 1232 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-210ENST00000518825 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-210ENST00000518825 TECPR2O15040 1411 aa10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 NCOA3Q9Y6Q9 1424 aa10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 AEBP1Q8IUX7 1158 aa10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 GNAI1P63096 354 aa10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-210ENST00000518825 KRT24Q2M2I5 525 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 ROBO2Q9HCK4 1378 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 ANKRD45Q5TZF3 282 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 NRKQ7Z2Y5 1582 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 RGS12O14924 1447 aa10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-210ENST00000518825 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
CTNNA1-210ENST00000518825 MCM4P33991 863 aa10.63□□□□□ -0.71
CTNNA1-210ENST00000518825 COG3Q96JB2 828 aa10.63□□□□□ -0.71
CTNNA1-210ENST00000518825 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-210ENST00000518825 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
CTNNA1-210ENST00000518825 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
CTNNA1-210ENST00000518825 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
CTNNA1-210ENST00000518825 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
CTNNA1-210ENST00000518825 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 ADAMTS13Q76LX8 1427 aa10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 CALD1Q05682 793 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 SNX21Q969T3 373 aa10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
CTNNA1-210ENST00000518825 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 OVOS2A0A0J9YW53 1432 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 OVOS2Q6IE36 1432 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 ATP10DQ9P241 1426 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 SULT6B1Q6IMI4 303 aa10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
CTNNA1-210ENST00000518825 FSD2A1L4K1 749 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 MCM10Q7L590 875 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 CHL1O00533 1208 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 NALCNQ8IZF0 1738 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 ACEP12821 1306 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
CTNNA1-210ENST00000518825 NUTM2FA1L443 756 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 LTKP29376 864 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 INTS3Q68E01 1043 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 XRCC6P12956 609 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 HSCBQ8IWL3 235 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 OTUD7AQ8TE49 926 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 CRB1P82279 1406 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 DCTPP1Q9H773 170 aa10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 RIMS1Q86UR5 1692 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-210ENST00000518825 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 TRAK2O60296 914 aa10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 API5Q9BZZ5 524 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 KIF24Q5T7B8 1368 aa10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 KIF13AQ9H1H9 1805 aa10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 FOXO3O43524 673 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms