RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TOM1O60784 492 aa7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 CFHP08603 1231 aa7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 VAC14Q08AM6 782 aa7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 FUT2Q10981 343 aa7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 CFAP70Q5T0N1 1121 aa7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 HMX1Q9NP08 348 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 RGS17Q9UGC6 210 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 ZNF335Q9H4Z2 1342 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P23-201ENST00000518743 PALM3A6NDB9 673 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 RAPGEF3O95398 923 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 RFX1P22670 979 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 LRRN4Q8WUT4 740 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 RNF166Q96A37 237 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 WDR7Q9Y4E6 1490 aa7.74□□□□□ -1.17
HMGB1P23-201ENST00000518743 ARAP3Q8WWN8 1544 aa7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 ATG7O95352 703 aa7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 LMOD1P29536 600 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 POTEAQ6S8J7 498 aa7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
HMGB1P23-201ENST00000518743 TTC37Q6PGP7 1564 aa7.72□□□□□ -1.17
HMGB1P23-201ENST00000518743 MFAP1P55081 439 aaKnown RBP7.72□□□□□ -1.17
HMGB1P23-201ENST00000518743 VPS9D1Q9Y2B5 631 aa7.72□□□□□ -1.17
HMGB1P23-201ENST00000518743 FANCAO15360 1455 aa7.72□□□□□ -1.17
HMGB1P23-201ENST00000518743 TNIKQ9UKE5 1360 aa7.71□□□□□ -1.17
HMGB1P23-201ENST00000518743 KIAA0556O60303 1618 aa7.71□□□□□ -1.17
HMGB1P23-201ENST00000518743 UACAQ9BZF9 1416 aa7.71□□□□□ -1.17
HMGB1P23-201ENST00000518743 UHRF1BP1LA0JNW5 1464 aa7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 TK2O00142 265 aa7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 CEBPAP49715 358 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P23-201ENST00000518743 ERICH3Q5RHP9 1530 aa7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 HRO43593 1189 aa7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 GPR37L1O60883 481 aa7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 MCCD1P59942 119 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 NR1H3Q13133 447 aa7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P23-201ENST00000518743 CARMIL2Q6F5E8 1435 aa7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 ARHGEF40Q8TER5 1519 aa7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 ACTN4O43707 911 aaKnown RBP7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 RNF40O75150 1001 aa7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 HLA-CQ95604 372 aa7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 SETD1BQ9UPS6 1966 aaKnown RBP7.69□□□□□ -1.18
HMGB1P23-201ENST00000518743 KDM5BQ9UGL1 1544 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 ATP9BO43861 1147 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 NR6A1Q15406 480 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 MORN1Q5T089 497 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P23-201ENST00000518743 ZBBXA8MT70 800 aa7.67□□□□□ -1.18
HMGB1P23-201ENST00000518743 LRCH3Q96II8 777 aa7.67□□□□□ -1.18
HMGB1P23-201ENST00000518743 STAC3Q96MF2 364 aa7.67□□□□□ -1.18
HMGB1P23-201ENST00000518743 MRPL50Q8N5N7 158 aaKnown RBP7.66□□□□□ -1.18
HMGB1P23-201ENST00000518743 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
HMGB1P23-201ENST00000518743 ZFRQ96KR1 1074 aaKnown RBP7.66□□□□□ -1.18
HMGB1P23-201ENST00000518743 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
HMGB1P23-201ENST00000518743 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 NCOA1Q15788 1441 aa7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 KCTD12Q96CX2 325 aaKnown RBP7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 USB1Q9BQ65 265 aaKnown RBP7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 FKBPLQ9UIM3 349 aa7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 AMOTL2Q9Y2J4 779 aa7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
HMGB1P23-201ENST00000518743 WRNQ14191 1432 aaPredicted RBP eCLIP7.64□□□□□ -1.19
HMGB1P23-201ENST00000518743 EPS8L1Q8TE68 723 aa7.64□□□□□ -1.19
HMGB1P23-201ENST00000518743 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P23-201ENST00000518743 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
HMGB1P23-201ENST00000518743 AKNAQ7Z591 1439 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 NR1I2O75469 434 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 FMNL1O95466 1100 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 PTPRNQ16849 979 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 SND1Q7KZF4 910 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 CCER1Q8TC90 406 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 TRIM52Q96A61 297 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 MTMR7Q9Y216 660 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 FRMPD1Q5SYB0 1578 aa7.63□□□□□ -1.19
HMGB1P23-201ENST00000518743 PHLDB1Q86UU1 1377 aa7.62□□□□□ -1.19
HMGB1P23-201ENST00000518743 BHMG1C9JSJ3 638 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P23-201ENST00000518743 PER1O15534 1290 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P23-201ENST00000518743 TBC1D9Q6ZT07 1266 aa7.62□□□□□ -1.19
HMGB1P23-201ENST00000518743 IVNS1ABPQ9Y6Y0 642 aa7.62□□□□□ -1.19
HMGB1P23-201ENST00000518743 CAMSAP1Q5T5Y3 1602 aa7.61□□□□□ -1.19
HMGB1P23-201ENST00000518743 TMEM88BA6NKF7 163 aa7.61□□□□□ -1.19
HMGB1P23-201ENST00000518743 PTK2Q05397 1052 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms