RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
TNPO1-211ENST00000518279 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
TNPO1-211ENST00000518279 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
TNPO1-211ENST00000518279 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
TNPO1-211ENST00000518279 PLSCR1O15162 318 aa24.15■■□□□ 1.46
TNPO1-211ENST00000518279 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
TNPO1-211ENST00000518279 MARCH10Q8NA82 808 aaPredicted RBP24.15■■□□□ 1.46
TNPO1-211ENST00000518279 SPON1Q9HCB6 807 aa24.15■■□□□ 1.46
TNPO1-211ENST00000518279 ANO8Q9HCE9 1232 aaPredicted RBP24.15■■□□□ 1.46
TNPO1-211ENST00000518279 SOX12O15370 315 aa24.14■■□□□ 1.45
TNPO1-211ENST00000518279 KCNQ2O43526 872 aa24.14■■□□□ 1.45
TNPO1-211ENST00000518279 AKAP12Q02952 1782 aa24.14■■□□□ 1.45
TNPO1-211ENST00000518279 BCL11BQ9C0K0 894 aaPredicted RBP24.13■■□□□ 1.45
TNPO1-211ENST00000518279 PROM2Q8N271 834 aa24.12■■□□□ 1.45
TNPO1-211ENST00000518279 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
TNPO1-211ENST00000518279 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
TNPO1-211ENST00000518279 PPP1R1BQ9UD71 204 aaPredicted RBP24.11■■□□□ 1.45
TNPO1-211ENST00000518279 KCNH5Q8NCM2 988 aa24.1■■□□□ 1.45
TNPO1-211ENST00000518279 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
TNPO1-211ENST00000518279 NFAT5O94916 1531 aa24.1■■□□□ 1.45
TNPO1-211ENST00000518279 CDCA7Q9BWT1 371 aaPredicted RBP24.09■■□□□ 1.45
TNPO1-211ENST00000518279 CARD10Q9BWT7 1032 aa24.09■■□□□ 1.45
TNPO1-211ENST00000518279 PDGFDQ9GZP0 370 aaPredicted RBP24.09■■□□□ 1.45
TNPO1-211ENST00000518279 BCL9O00512 1426 aa24.09■■□□□ 1.45
TNPO1-211ENST00000518279 UTRNP46939 3433 aa24.09■■□□□ 1.45
TNPO1-211ENST00000518279 CASZ1Q86V15 1759 aa24.08■■□□□ 1.45
TNPO1-211ENST00000518279 CSB-PGBD3P0DP91 1061 aa24.08■■□□□ 1.45
TNPO1-211ENST00000518279 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.44
TNPO1-211ENST00000518279 YY1P25490 414 aa24.07■■□□□ 1.44
TNPO1-211ENST00000518279 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
TNPO1-211ENST00000518279 KTN1Q86UP2 1357 aaKnown RBP24.05■■□□□ 1.44
TNPO1-211ENST00000518279 NINLQ9Y2I6 1382 aa24.04■■□□□ 1.44
TNPO1-211ENST00000518279 EXOC5O00471 708 aa24.03■■□□□ 1.44
TNPO1-211ENST00000518279 MON2Q7Z3U7 1717 aa24.02■■□□□ 1.44
TNPO1-211ENST00000518279 ZBTB7AO95365 584 aa24.01■■□□□ 1.43
TNPO1-211ENST00000518279 TXNRD1Q16881 649 aa24.01■■□□□ 1.43
TNPO1-211ENST00000518279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
TNPO1-211ENST00000518279 CCDC7Q96M83 1385 aa24■■□□□ 1.43
TNPO1-211ENST00000518279 ABCC6O95255 1503 aa24■■□□□ 1.43
TNPO1-211ENST00000518279 TNS2Q63HR2 1409 aa23.99■■□□□ 1.43
TNPO1-211ENST00000518279 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
TNPO1-211ENST00000518279 PTGER2P43116 358 aa23.98■■□□□ 1.43
TNPO1-211ENST00000518279 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
TNPO1-211ENST00000518279 MYOM1P52179 1685 aa23.97■■□□□ 1.43
TNPO1-211ENST00000518279 NME9Q86XW9 330 aa23.97■■□□□ 1.43
TNPO1-211ENST00000518279 ATF5Q9Y2D1 282 aaPredicted RBP23.97■■□□□ 1.43
TNPO1-211ENST00000518279 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
TNPO1-211ENST00000518279 SBNO2Q9Y2G9 1366 aa23.96■■□□□ 1.43
TNPO1-211ENST00000518279 SLC15A2Q16348 729 aa23.96■■□□□ 1.43
TNPO1-211ENST00000518279 STK32BQ9NY57 414 aa23.96■■□□□ 1.43
TNPO1-211ENST00000518279 ERBB3P21860 1342 aa23.95■■□□□ 1.42
TNPO1-211ENST00000518279 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
TNPO1-211ENST00000518279 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
TNPO1-211ENST00000518279 DCAF8L1A6NGE4 600 aa23.94■■□□□ 1.42
TNPO1-211ENST00000518279 NLRP2Q9NX02 1062 aa23.94■■□□□ 1.42
TNPO1-211ENST00000518279 LTN1O94822 1766 aa23.93■■□□□ 1.42
TNPO1-211ENST00000518279 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
TNPO1-211ENST00000518279 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
TNPO1-211ENST00000518279 IL2RBP14784 551 aa23.9■■□□□ 1.42
TNPO1-211ENST00000518279 CARD11Q9BXL7 1154 aa23.9■■□□□ 1.42
TNPO1-211ENST00000518279 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
TNPO1-211ENST00000518279 ANKRD24Q8TF21 1146 aa23.89■■□□□ 1.41
TNPO1-211ENST00000518279 SGIP1Q9BQI5 828 aa23.88■■□□□ 1.41
TNPO1-211ENST00000518279 PAPPAQ13219 1627 aa23.88■■□□□ 1.41
TNPO1-211ENST00000518279 BTAF1O14981 1849 aa23.87■■□□□ 1.41
TNPO1-211ENST00000518279 HDGFL2Q7Z4V5 671 aaPredicted RBP23.87■■□□□ 1.41
TNPO1-211ENST00000518279 FHDC1Q9C0D6 1143 aaPredicted RBP23.87■■□□□ 1.41
TNPO1-211ENST00000518279 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
TNPO1-211ENST00000518279 MTFR1LQ9H019 292 aa23.86■■□□□ 1.41
TNPO1-211ENST00000518279 A0A1W2PP64 1363 aa23.86■■□□□ 1.41
TNPO1-211ENST00000518279 KAT6BQ8WYB5 2073 aa23.85■■□□□ 1.41
TNPO1-211ENST00000518279 SYT17Q9BSW7 474 aa23.85■■□□□ 1.41
TNPO1-211ENST00000518279 GOLGB1Q14789 3259 aaKnown RBP23.84■■□□□ 1.41
TNPO1-211ENST00000518279 ZNF827Q17R98 1081 aa23.83■■□□□ 1.41
TNPO1-211ENST00000518279 LRRC4BQ9NT99 713 aa23.83■■□□□ 1.41
TNPO1-211ENST00000518279 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
TNPO1-211ENST00000518279 IP6K1Q92551 441 aa23.8■■□□□ 1.4
TNPO1-211ENST00000518279 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
TNPO1-211ENST00000518279 DDX54Q8TDD1 881 aaKnown RBP23.78■■□□□ 1.4
TNPO1-211ENST00000518279 ARXQ96QS3 562 aa23.78■■□□□ 1.4
TNPO1-211ENST00000518279 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
TNPO1-211ENST00000518279 FBLN1P23142 703 aa23.76■■□□□ 1.39
TNPO1-211ENST00000518279 ZNF784Q8NCA9 323 aaPredicted RBP23.76■■□□□ 1.39
TNPO1-211ENST00000518279 AKT1S1Q96B36 256 aa23.76■■□□□ 1.39
TNPO1-211ENST00000518279 FAM208AQ9UK61 1670 aaKnown RBP23.74■■□□□ 1.39
TNPO1-211ENST00000518279 TESK2Q96S53 571 aa23.74■■□□□ 1.39
TNPO1-211ENST00000518279 MAP3K19Q56UN5 1328 aa23.74■■□□□ 1.39
TNPO1-211ENST00000518279 HOXC9P31274 260 aa23.72■■□□□ 1.39
TNPO1-211ENST00000518279 KCNQ4P56696 695 aa23.72■■□□□ 1.39
TNPO1-211ENST00000518279 MAP3K5Q99683 1374 aa23.72■■□□□ 1.39
TNPO1-211ENST00000518279 RGPD2P0DJD1 1756 aa23.72■■□□□ 1.39
TNPO1-211ENST00000518279 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
TNPO1-211ENST00000518279 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
TNPO1-211ENST00000518279 CHD4Q14839 1912 aa23.71■■□□□ 1.39
TNPO1-211ENST00000518279 PNPLA7Q6ZV29 1317 aa23.7■■□□□ 1.38
TNPO1-211ENST00000518279 PRIM1P49642 420 aaKnown RBP23.7■■□□□ 1.38
TNPO1-211ENST00000518279 COG3Q96JB2 828 aa23.7■■□□□ 1.38
TNPO1-211ENST00000518279 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.38
TNPO1-211ENST00000518279 DOT1LQ8TEK3 1739 aa23.7■■□□□ 1.38
TNPO1-211ENST00000518279 SHANK3Q9BYB0 1731 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms