RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NALCNQ8IZF0 1738 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
CDH12-203ENST00000517378 SNX21Q969T3 373 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 IL13P35225 146 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 BMP2KLQ5H9B9 411 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
CDH12-203ENST00000517378 GCC1Q96CN9 775 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 CHMP5Q9NZZ3 219 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 ZBTB7BO15156 539 aaPredicted RBP8.39□□□□□ -1.07
CDH12-203ENST00000517378 VAMP4O75379 141 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
CDH12-203ENST00000517378 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
CDH12-203ENST00000517378 RGPD1P0DJD0 1748 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 L1TD1Q5T7N2 865 aaKnown RBP8.39□□□□□ -1.07
CDH12-203ENST00000517378 FAM43AQ8N2R8 423 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
CDH12-203ENST00000517378 MCM4P33991 863 aa8.38□□□□□ -1.07
CDH12-203ENST00000517378 GNAI1P63096 354 aa8.38□□□□□ -1.07
CDH12-203ENST00000517378 FSD2A1L4K1 749 aa8.38□□□□□ -1.07
CDH12-203ENST00000517378 LMOD3Q0VAK6 560 aa8.37□□□□□ -1.07
CDH12-203ENST00000517378 PHACTR3Q96KR7 559 aa8.37□□□□□ -1.07
CDH12-203ENST00000517378 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
CDH12-203ENST00000517378 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
CDH12-203ENST00000517378 HSCBQ8IWL3 235 aa8.37□□□□□ -1.07
CDH12-203ENST00000517378 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
CDH12-203ENST00000517378 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
CDH12-203ENST00000517378 WAPLQ7Z5K2 1190 aa8.36□□□□□ -1.07
CDH12-203ENST00000517378 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
CDH12-203ENST00000517378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH12-203ENST00000517378 LNPKQ9C0E8 428 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 METP08581 1390 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 UBR1Q8IWV7 1749 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 RGS12O14924 1447 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 DDX11L8A8MPP1 907 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 TSPYL6Q8N831 410 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH12-203ENST00000517378 KIF2CQ99661 725 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 TSPOAP1O95153 1857 aa8.35□□□□□ -1.07
CDH12-203ENST00000517378 API5Q9BZZ5 524 aaKnown RBP8.35□□□□□ -1.07
CDH12-203ENST00000517378 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
CDH12-203ENST00000517378 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 FMN2Q9NZ56 1722 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 OVOS2A0A0J9YW53 1432 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 OVOS2Q6IE36 1432 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 HMOX1P09601 288 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.07
CDH12-203ENST00000517378 NME9Q86XW9 330 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 ATP10DQ9P241 1426 aa8.34□□□□□ -1.07
CDH12-203ENST00000517378 EIF5BO60841 1220 aaKnown RBP8.34□□□□□ -1.07
CDH12-203ENST00000517378 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.33□□□□□ -1.08
CDH12-203ENST00000517378 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
CDH12-203ENST00000517378 FBLN1P23142 703 aa8.33□□□□□ -1.08
CDH12-203ENST00000517378 THUMPD2Q9BTF0 503 aaKnown RBP8.33□□□□□ -1.08
CDH12-203ENST00000517378 RIMS1Q86UR5 1692 aaKnown RBP8.33□□□□□ -1.08
CDH12-203ENST00000517378 COG3Q96JB2 828 aa8.33□□□□□ -1.08
CDH12-203ENST00000517378 CCDC61Q9Y6R9 512 aa8.33□□□□□ -1.08
CDH12-203ENST00000517378 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
CDH12-203ENST00000517378 GOLGA6L3A6NEY3 463 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 TRAK2O60296 914 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 RAB3GAP1Q15042 981 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
CDH12-203ENST00000517378 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
CDH12-203ENST00000517378 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 C8orf58Q8NAV2 365 aa8.32□□□□□ -1.08
CDH12-203ENST00000517378 SENP3Q9H4L4 574 aaPredicted RBP8.32□□□□□ -1.08
CDH12-203ENST00000517378 TUBGCP6Q96RT7 1819 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH12-203ENST00000517378 PTMSP20962 102 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
CDH12-203ENST00000517378 CLEC17AQ6ZS10 378 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 CDC45O75419 566 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 DCTPP1Q9H773 170 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
CDH12-203ENST00000517378 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 PRR36Q9H6K5 1346 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 ADAMTS13Q76LX8 1427 aa8.31□□□□□ -1.08
CDH12-203ENST00000517378 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
CDH12-203ENST00000517378 C1orf115Q9H7X2 142 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 GSPT1P15170 499 aaKnown RBP8.3□□□□□ -1.08
CDH12-203ENST00000517378 MRE11P49959 708 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 USP6P35125 1406 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 CRB1P82279 1406 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 KIF13AQ9H1H9 1805 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 CHL1O00533 1208 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 TNPO1Q92973 898 aaKnown RBP8.3□□□□□ -1.08
CDH12-203ENST00000517378 PTPRCP08575 1304 aa8.3□□□□□ -1.08
CDH12-203ENST00000517378 TMEM2Q9UHN6 1383 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 FAM208AQ9UK61 1670 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 1244.2 ms