RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
SCARNA1-201ENST00000517138 CAPN5O15484 640 aaPredicted RBP11.49□□□□□ -0.57
SCARNA1-201ENST00000517138 BMP1P13497 986 aa11.49□□□□□ -0.57
SCARNA1-201ENST00000517138 NR1H3Q13133 447 aa11.49□□□□□ -0.57
SCARNA1-201ENST00000517138 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
SCARNA1-201ENST00000517138 APBB1O00213 710 aa11.48□□□□□ -0.57
SCARNA1-201ENST00000517138 ABL2P42684 1182 aa11.48□□□□□ -0.57
SCARNA1-201ENST00000517138 INTS6LQ5JSJ4 861 aaKnown RBP11.48□□□□□ -0.57
SCARNA1-201ENST00000517138 COG6Q9Y2V7 657 aa11.48□□□□□ -0.57
SCARNA1-201ENST00000517138 PCDHB9Q9Y5E1 797 aa11.48□□□□□ -0.57
SCARNA1-201ENST00000517138 ZIC2O95409 532 aaPredicted RBP11.47□□□□□ -0.57
SCARNA1-201ENST00000517138 RAB15P59190 212 aa11.47□□□□□ -0.57
SCARNA1-201ENST00000517138 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
SCARNA1-201ENST00000517138 GMPR2Q9P2T1 348 aaKnown RBP11.47□□□□□ -0.57
SCARNA1-201ENST00000517138 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
SCARNA1-201ENST00000517138 CCDC116Q8IYX3 515 aa11.46□□□□□ -0.57
SCARNA1-201ENST00000517138 VAC14Q08AM6 782 aa11.44□□□□□ -0.58
SCARNA1-201ENST00000517138 PPP1R26Q5T8A7 1209 aaPredicted RBP11.44□□□□□ -0.58
SCARNA1-201ENST00000517138 TMPRSS4Q9NRS4 437 aa11.44□□□□□ -0.58
SCARNA1-201ENST00000517138 ESPNB1AK53 854 aa11.43□□□□□ -0.58
SCARNA1-201ENST00000517138 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
SCARNA1-201ENST00000517138 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
SCARNA1-201ENST00000517138 CDV3Q9UKY7 258 aaKnown RBP11.43□□□□□ -0.58
SCARNA1-201ENST00000517138 CBLBQ13191 982 aa11.41□□□□□ -0.58
SCARNA1-201ENST00000517138 NBPF20Q3BBV1 942 aa11.41□□□□□ -0.58
SCARNA1-201ENST00000517138 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
SCARNA1-201ENST00000517138 FLIIQ13045 1269 aa11.4□□□□□ -0.58
SCARNA1-201ENST00000517138 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.58
SCARNA1-201ENST00000517138 CLUAP1Q96AJ1 413 aa11.39□□□□□ -0.59
SCARNA1-201ENST00000517138 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
SCARNA1-201ENST00000517138 SNRPBP14678 240 aaKnown RBP11.38□□□□□ -0.59
SCARNA1-201ENST00000517138 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
SCARNA1-201ENST00000517138 MRPL14Q6P1L8 145 aaKnown RBP11.37□□□□□ -0.59
SCARNA1-201ENST00000517138 ZNF784Q8NCA9 323 aaPredicted RBP11.37□□□□□ -0.59
SCARNA1-201ENST00000517138 MEIOBQ8N635 442 aa11.36□□□□□ -0.59
SCARNA1-201ENST00000517138 ZFP42Q96MM3 310 aa11.36□□□□□ -0.59
SCARNA1-201ENST00000517138 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
SCARNA1-201ENST00000517138 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
SCARNA1-201ENST00000517138 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
SCARNA1-201ENST00000517138 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 LILRA1O75019 489 aa11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 TSGA10IPQ3SY00 556 aa11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
SCARNA1-201ENST00000517138 POM121CA8CG34 1229 aa11.33□□□□□ -0.6
SCARNA1-201ENST00000517138 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
SCARNA1-201ENST00000517138 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
SCARNA1-201ENST00000517138 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
SCARNA1-201ENST00000517138 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
SCARNA1-201ENST00000517138 Q6ZVU0 165 aa11.32□□□□□ -0.6
SCARNA1-201ENST00000517138 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
SCARNA1-201ENST00000517138 RAD21O60216 631 aa11.31□□□□□ -0.6
SCARNA1-201ENST00000517138 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCARNA1-201ENST00000517138 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
SCARNA1-201ENST00000517138 LINC00528Q8N1L1 170 aa11.31□□□□□ -0.6
SCARNA1-201ENST00000517138 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
SCARNA1-201ENST00000517138 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
SCARNA1-201ENST00000517138 SCTRP47872 440 aa11.3□□□□□ -0.6
SCARNA1-201ENST00000517138 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
SCARNA1-201ENST00000517138 CDCA7Q9BWT1 371 aaPredicted RBP11.3□□□□□ -0.6
SCARNA1-201ENST00000517138 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
SCARNA1-201ENST00000517138 PHTF2Q8N3S3 785 aa11.29□□□□□ -0.6
SCARNA1-201ENST00000517138 BMP2P12643 396 aa11.28□□□□□ -0.6
SCARNA1-201ENST00000517138 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
SCARNA1-201ENST00000517138 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
SCARNA1-201ENST00000517138 PCDHB11Q9Y5F2 797 aa11.28□□□□□ -0.6
SCARNA1-201ENST00000517138 RELBQ01201 579 aa11.27□□□□□ -0.61
SCARNA1-201ENST00000517138 SCARF1Q14162 830 aa11.27□□□□□ -0.61
SCARNA1-201ENST00000517138 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
SCARNA1-201ENST00000517138 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
SCARNA1-201ENST00000517138 ZNF395Q9H8N7 513 aaPredicted RBP11.26□□□□□ -0.61
SCARNA1-201ENST00000517138 SEMA3FQ13275 785 aa11.25□□□□□ -0.61
SCARNA1-201ENST00000517138 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
SCARNA1-201ENST00000517138 ZNF775Q96BV0 537 aaPredicted RBP11.25□□□□□ -0.61
SCARNA1-201ENST00000517138 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
SCARNA1-201ENST00000517138 ALG2Q9H553 416 aa11.25□□□□□ -0.61
SCARNA1-201ENST00000517138 ADH1AP07327 375 aa11.24□□□□□ -0.61
SCARNA1-201ENST00000517138 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
SCARNA1-201ENST00000517138 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
SCARNA1-201ENST00000517138 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
SCARNA1-201ENST00000517138 ZNF592Q92610 1267 aa11.23□□□□□ -0.61
SCARNA1-201ENST00000517138 SPINT1O43278 529 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 UPP2O95045 317 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 INSM2Q96T92 566 aaPredicted RBP11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
SCARNA1-201ENST00000517138 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
SCARNA1-201ENST00000517138 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
SCARNA1-201ENST00000517138 PTGIRP43119 386 aa11.2□□□□□ -0.62
SCARNA1-201ENST00000517138 CHIC2Q9UKJ5 165 aa11.2□□□□□ -0.62
SCARNA1-201ENST00000517138 FIGNL2A6NMB9 653 aa11.19□□□□□ -0.62
SCARNA1-201ENST00000517138 TRAK2O60296 914 aa11.19□□□□□ -0.62
SCARNA1-201ENST00000517138 SOX11P35716 441 aa11.19□□□□□ -0.62
SCARNA1-201ENST00000517138 WWC1Q8IX03 1113 aa11.19□□□□□ -0.62
SCARNA1-201ENST00000517138 DOLKQ9UPQ8 538 aa11.19□□□□□ -0.62
SCARNA1-201ENST00000517138 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms