RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TERTO14746 1132 aaKnown RBP6.74□□□□□ -1.33
RNU6-1088P-201ENST00000516850 NR3C2P08235 984 aa6.74□□□□□ -1.33
RNU6-1088P-201ENST00000516850 KLF16Q9BXK1 252 aaPredicted RBP6.74□□□□□ -1.33
RNU6-1088P-201ENST00000516850 ZFAND3Q9H8U3 227 aa6.74□□□□□ -1.33
RNU6-1088P-201ENST00000516850 PGPEP1Q9NXJ5 209 aa6.74□□□□□ -1.33
RNU6-1088P-201ENST00000516850 DHX9Q08211 1270 aaKnown RBP6.73□□□□□ -1.33
RNU6-1088P-201ENST00000516850 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
RNU6-1088P-201ENST00000516850 NXF1Q9UBU9 619 aaKnown RBP6.73□□□□□ -1.33
RNU6-1088P-201ENST00000516850 BMP2P12643 396 aa6.72□□□□□ -1.33
RNU6-1088P-201ENST00000516850 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
RNU6-1088P-201ENST00000516850 HMX1Q9NP08 348 aaPredicted RBP6.72□□□□□ -1.33
RNU6-1088P-201ENST00000516850 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.34
RNU6-1088P-201ENST00000516850 DZIP3Q86Y13 1208 aaKnown RBP6.71□□□□□ -1.34
RNU6-1088P-201ENST00000516850 ADAM32Q8TC27 787 aa6.71□□□□□ -1.34
RNU6-1088P-201ENST00000516850 EPS8L1Q8TE68 723 aa6.71□□□□□ -1.34
RNU6-1088P-201ENST00000516850 MAN1A2O60476 641 aa6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 NFX1Q12986 1120 aaKnown RBP6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 PPP1R26Q5T8A7 1209 aaPredicted RBP6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 LINC00528Q8N1L1 170 aa6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 TSEN34Q9BSV6 310 aaKnown RBP6.7□□□□□ -1.34
RNU6-1088P-201ENST00000516850 NPAS3Q8IXF0 933 aa6.69□□□□□ -1.34
RNU6-1088P-201ENST00000516850 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
RNU6-1088P-201ENST00000516850 APBB1O00213 710 aa6.68□□□□□ -1.34
RNU6-1088P-201ENST00000516850 RAB15P59190 212 aa6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 INSM1Q01101 510 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 INTS6LQ5JSJ4 861 aaKnown RBP6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 BANK1Q8NDB2 785 aa6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 IRF7Q92985 503 aa6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 ZNF330Q9Y3S2 320 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1088P-201ENST00000516850 ZBBXA8MT70 800 aa6.66□□□□□ -1.34
RNU6-1088P-201ENST00000516850 ZNF592Q92610 1267 aa6.66□□□□□ -1.34
RNU6-1088P-201ENST00000516850 OCSTAMPQ9BR26 566 aa6.66□□□□□ -1.34
RNU6-1088P-201ENST00000516850 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
RNU6-1088P-201ENST00000516850 SOBPA7XYQ1 873 aa6.65□□□□□ -1.34
RNU6-1088P-201ENST00000516850 CBLBQ13191 982 aa6.65□□□□□ -1.34
RNU6-1088P-201ENST00000516850 PRM3Q9NNZ6 103 aa6.65□□□□□ -1.34
RNU6-1088P-201ENST00000516850 PCDHB9Q9Y5E1 797 aa6.65□□□□□ -1.34
RNU6-1088P-201ENST00000516850 WIPF1O43516 503 aa6.64□□□□□ -1.35
RNU6-1088P-201ENST00000516850 VEGFBP49765 207 aa6.64□□□□□ -1.35
RNU6-1088P-201ENST00000516850 Q6ZVU0 165 aa6.64□□□□□ -1.35
RNU6-1088P-201ENST00000516850 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 MCCD1P59942 119 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 SEPT12Q8IYM1 358 aa6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 GJD4Q96KN9 370 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 NDUFB9Q9Y6M9 179 aa6.63□□□□□ -1.35
RNU6-1088P-201ENST00000516850 H3BM21 787 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ERVH48-1M5A8F1 160 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 RELBQ01201 579 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 RNF20Q5VTR2 975 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 CCDC125Q86Z20 511 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 TMPRSS4Q9NRS4 437 aa6.62□□□□□ -1.35
RNU6-1088P-201ENST00000516850 FIGNL2A6NMB9 653 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 SOCS7O14512 581 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 SPINT1O43278 529 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 FBXO45P0C2W1 286 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 NR1H3Q13133 447 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ZNF784Q8NCA9 323 aaPredicted RBP6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ESF1Q9H501 851 aaKnown RBP6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 POLMQ9NP87 494 aaPredicted RBP6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ESPNB1AK53 854 aa6.6□□□□□ -1.35
RNU6-1088P-201ENST00000516850 AGBL1Q96MI9 1066 aa6.6□□□□□ -1.35
RNU6-1088P-201ENST00000516850 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 GIGYF1O75420 1035 aaPredicted RBP6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ADH1AP07327 375 aa6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 GMPRP36959 345 aa6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 ZNF395Q9H8N7 513 aaPredicted RBP6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 SNRKQ9NRH2 765 aa6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 STK17AQ9UEE5 414 aa6.59□□□□□ -1.35
RNU6-1088P-201ENST00000516850 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
RNU6-1088P-201ENST00000516850 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
RNU6-1088P-201ENST00000516850 INSM2Q96T92 566 aaPredicted RBP6.58□□□□□ -1.36
RNU6-1088P-201ENST00000516850 PTGIRP43119 386 aa6.57□□□□□ -1.36
RNU6-1088P-201ENST00000516850 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
RNU6-1088P-201ENST00000516850 LILRA1O75019 489 aa6.56□□□□□ -1.36
RNU6-1088P-201ENST00000516850 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
RNU6-1088P-201ENST00000516850 CTSOP43234 321 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1088P-201ENST00000516850 PTSQ03393 145 aa6.56□□□□□ -1.36
RNU6-1088P-201ENST00000516850 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
RNU6-1088P-201ENST00000516850 ERBB4Q15303 1308 aa6.55□□□□□ -1.36
RNU6-1088P-201ENST00000516850 ATP5J2-PTCD1G3V325 749 aa6.55□□□□□ -1.36
RNU6-1088P-201ENST00000516850 PRKCSHP14314 528 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1088P-201ENST00000516850 CC2D2BQ6DHV5 1058 aa6.55□□□□□ -1.36
RNU6-1088P-201ENST00000516850 ZSCAN1Q8NBB4 408 aa6.55□□□□□ -1.36
RNU6-1088P-201ENST00000516850 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
RNU6-1088P-201ENST00000516850 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
RNU6-1088P-201ENST00000516850 CCDC155Q8N6L0 562 aa6.54□□□□□ -1.36
RNU6-1088P-201ENST00000516850 PCDHB11Q9Y5F2 797 aa6.54□□□□□ -1.36
RNU6-1088P-201ENST00000516850 LYSMD3Q7Z3D4 306 aa6.53□□□□□ -1.36
RNU6-1088P-201ENST00000516850 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
RNU6-1088P-201ENST00000516850 TBC1D2BQ9UPU7 963 aa6.53□□□□□ -1.36
RNU6-1088P-201ENST00000516850 SLC35F4A4IF30 521 aa6.52□□□□□ -1.37
RNU6-1088P-201ENST00000516850 MEN1O00255 615 aa6.52□□□□□ -1.37
RNU6-1088P-201ENST00000516850 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
RNU6-1088P-201ENST00000516850 CYP2U1Q7Z449 544 aa6.52□□□□□ -1.37
RNU6-1088P-201ENST00000516850 RNF217Q8TC41 542 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms