RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 PHTF2Q8N3S3 785 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 EHBP1Q8NDI1 1231 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 FOXJ1Q92949 421 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 UCN2Q96RP3 112 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CARD14Q9BXL6 1004 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PLA2G2EQ9NZK7 142 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 MAFBQ9Y5Q3 323 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 V9GY48 417 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 A0A0G2JS52 829 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP17L5A8MUK1 530 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ESPNB1AK53 854 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PATL2C9JE40 543 aaKnown RBP3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 WNT7AO00755 349 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 RGS20O76081 388 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ATG7O95352 703 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CSB-PGBD3P0DP91 1061 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PDIA4P13667 645 aaKnown RBP3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ATP1A2P50993 1020 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP4Q13107 963 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ELOAQ14241 798 aaKnown RBP3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 EML3Q32P44 896 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 C4orf48Q5BLP8 95 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 RC3H1Q5TC82 1133 aaKnown RBP3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 TBC1D9Q6ZT07 1266 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PLPP7Q8NBV4 271 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CDK15Q96Q40 435 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ESF1Q9H501 851 aaKnown RBP3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USTQ9Y2C2 406 aa3.6□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP17L3A6NCW0 530 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP17L4A6NCW7 530 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SRPK2P78362 688 aaKnown RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 NR5A1Q13285 461 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PLA2G2CQ5R387 149 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SPRYD7Q5W111 196 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 LARP1Q6PKG0 1096 aaKnown RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP17L2Q6R6M4 530 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 VASH1Q7L8A9 365 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 USP17L1Q7RTZ2 530 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ZNF598Q86UK7 904 aaKnown RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 KCTD15Q96SI1 283 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 DOLKQ9UPQ8 538 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 NOD1Q9Y239 953 aa3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 RBM19Q9Y4C8 960 aaKnown RBP3.59□□□□□ -1.83
RNU6-1041P-201ENST00000516254 FAM196BA6NMK8 535 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 GIGYF1O75420 1035 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 MYCP01106 439 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 RFX1P22670 979 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SKOR1P84550 965 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 KANK4Q5T7N3 995 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 B4GALNT3Q6L9W6 998 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 LIAT1Q6ZQX7 453 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 KCTD17Q8N5Z5 321 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 TRAIPQ9BWF2 469 aa3.58□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PIK3CDO00329 1044 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SIAH2O43255 324 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 RASA1P20936 1047 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 NCOA4Q13772 614 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 TRAF7Q6Q0C0 670 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 LARGE2Q8N3Y3 721 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PGPEP1Q9NXJ5 209 aa3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 MKRN1Q9UHC7 482 aaKnown RBP3.57□□□□□ -1.84
RNU6-1041P-201ENST00000516254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ADH1CP00326 375 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 GRM5P41594 1212 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ARID5BQ14865 1188 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 INTS6LQ5JSJ4 861 aaKnown RBP3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ZNF697Q5TEC3 545 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CCDC116Q8IYX3 515 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SNIP1Q8TAD8 396 aaKnown RBP3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 MRGPRX2Q96LB1 330 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CDCA7Q9BWT1 371 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRKD2Q9BZL6 878 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PCDHB11Q9Y5F2 797 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 EMILIN1Q9Y6C2 1016 aa3.56□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ERVK-9P63128 1117 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRR20EP86478 221 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRR20CP86479 221 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRR20DP86480 221 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRR20BP86481 221 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PRR20AP86496 221 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 MYT1Q01538 1121 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PTK7Q13308 1070 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SWI5Q1ZZU3 235 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CC2D2BQ6DHV5 1058 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CYP4X1Q8N118 509 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 OGFOD1Q8N543 542 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 RETREG2Q8NC44 543 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 FAM200AQ8TCP9 573 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CCDC85AQ96PX6 553 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 IRX2Q9BZI1 471 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 DNAAF2Q9NVR5 837 aaKnown RBP3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 WASF2Q9Y6W5 498 aa3.55□□□□□ -1.84
RNU6-1041P-201ENST00000516254 TTC24A2A3L6 582 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L15C9J2P7 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L10C9JJH3 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L13C9JLJ4 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L12C9JPN9 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L11C9JVI0 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L21D6R901 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L18D6R9N7 530 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms