RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 UPP2O95045 317 aa7.14□□□□□ -1.27
RNU4-49P-201ENST00000516080 CCDC116Q8IYX3 515 aa7.14□□□□□ -1.27
RNU4-49P-201ENST00000516080 BRPF1P55201 1214 aaPredicted RBP7.13□□□□□ -1.27
RNU4-49P-201ENST00000516080 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
RNU4-49P-201ENST00000516080 SLC16A10Q8TF71 515 aa7.13□□□□□ -1.27
RNU4-49P-201ENST00000516080 PURBQ96QR8 312 aaKnown RBP7.13□□□□□ -1.27
RNU4-49P-201ENST00000516080 NXF1Q9UBU9 619 aaKnown RBP7.13□□□□□ -1.27
RNU4-49P-201ENST00000516080 MEIOBQ8N635 442 aa7.12□□□□□ -1.27
RNU4-49P-201ENST00000516080 HMX1Q9NP08 348 aaPredicted RBP7.12□□□□□ -1.27
RNU4-49P-201ENST00000516080 PGPEP1Q9NXJ5 209 aa7.12□□□□□ -1.27
RNU4-49P-201ENST00000516080 DHX9Q08211 1270 aaKnown RBP7.11□□□□□ -1.27
RNU4-49P-201ENST00000516080 EPS8L1Q8TE68 723 aa7.11□□□□□ -1.27
RNU4-49P-201ENST00000516080 KCTD15Q96SI1 283 aaPredicted RBP7.11□□□□□ -1.27
RNU4-49P-201ENST00000516080 BMP2P12643 396 aa7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 TPRNQ4KMQ1 711 aa7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 ADAM32Q8TC27 787 aa7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 TSEN34Q9BSV6 310 aaKnown RBP7.1□□□□□ -1.27
RNU4-49P-201ENST00000516080 WIPF1O43516 503 aa7.09□□□□□ -1.27
RNU4-49P-201ENST00000516080 MAN1A2O60476 641 aa7.09□□□□□ -1.27
RNU4-49P-201ENST00000516080 NBPF20Q3BBV1 942 aa7.09□□□□□ -1.27
RNU4-49P-201ENST00000516080 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
RNU4-49P-201ENST00000516080 OCSTAMPQ9BR26 566 aa7.09□□□□□ -1.27
RNU4-49P-201ENST00000516080 TRIM34Q9BYJ4 488 aa7.08□□□□□ -1.28
RNU4-49P-201ENST00000516080 H3BM21 787 aa7.07□□□□□ -1.28
RNU4-49P-201ENST00000516080 INSM1Q01101 510 aaPredicted RBP7.07□□□□□ -1.28
RNU4-49P-201ENST00000516080 DZIP3Q86Y13 1208 aaKnown RBP7.07□□□□□ -1.28
RNU4-49P-201ENST00000516080 IRF7Q92985 503 aa7.07□□□□□ -1.28
RNU4-49P-201ENST00000516080 INTS6LQ5JSJ4 861 aaKnown RBP7.06□□□□□ -1.28
RNU4-49P-201ENST00000516080 Q6ZVU0 165 aa7.06□□□□□ -1.28
RNU4-49P-201ENST00000516080 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
RNU4-49P-201ENST00000516080 TRIM52Q96A61 297 aa7.06□□□□□ -1.28
RNU4-49P-201ENST00000516080 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
RNU4-49P-201ENST00000516080 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
RNU4-49P-201ENST00000516080 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
RNU4-49P-201ENST00000516080 ZBBXA8MT70 800 aa7.04□□□□□ -1.28
RNU4-49P-201ENST00000516080 APBB1O00213 710 aa7.04□□□□□ -1.28
RNU4-49P-201ENST00000516080 SOCS7O14512 581 aa7.04□□□□□ -1.28
RNU4-49P-201ENST00000516080 GJD4Q96KN9 370 aaPredicted RBP7.04□□□□□ -1.28
RNU4-49P-201ENST00000516080 TTLL8A6PVC2 850 aa7.03□□□□□ -1.28
RNU4-49P-201ENST00000516080 VEGFBP49765 207 aa7.03□□□□□ -1.28
RNU4-49P-201ENST00000516080 CBLBQ13191 982 aa7.03□□□□□ -1.28
RNU4-49P-201ENST00000516080 SEPT12Q8IYM1 358 aa7.03□□□□□ -1.28
RNU4-49P-201ENST00000516080 ESPNB1AK53 854 aa7.02□□□□□ -1.29
RNU4-49P-201ENST00000516080 SPINT1O43278 529 aa7.02□□□□□ -1.29
RNU4-49P-201ENST00000516080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.02□□□□□ -1.29
RNU4-49P-201ENST00000516080 ZNF592Q92610 1267 aa7.02□□□□□ -1.29
RNU4-49P-201ENST00000516080 STK17AQ9UEE5 414 aa7.02□□□□□ -1.29
RNU4-49P-201ENST00000516080 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 GMPRP36959 345 aa7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 RAB15P59190 212 aa7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 CCDC125Q86Z20 511 aa7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
RNU4-49P-201ENST00000516080 FBXO45P0C2W1 286 aa7□□□□□ -1.29
RNU4-49P-201ENST00000516080 VSIG8P0DPA2 414 aa7□□□□□ -1.29
RNU4-49P-201ENST00000516080 ZNF784Q8NCA9 323 aaPredicted RBP7□□□□□ -1.29
RNU4-49P-201ENST00000516080 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
RNU4-49P-201ENST00000516080 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
RNU4-49P-201ENST00000516080 ERBB4Q15303 1308 aa7□□□□□ -1.29
RNU4-49P-201ENST00000516080 RELBQ01201 579 aa6.99□□□□□ -1.29
RNU4-49P-201ENST00000516080 AGBL1Q96MI9 1066 aa6.99□□□□□ -1.29
RNU4-49P-201ENST00000516080 ZNF330Q9Y3S2 320 aaPredicted RBP6.99□□□□□ -1.29
RNU4-49P-201ENST00000516080 NDUFB9Q9Y6M9 179 aa6.99□□□□□ -1.29
RNU4-49P-201ENST00000516080 FIGNL2A6NMB9 653 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 LILRA1O75019 489 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 ADH1AP07327 375 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 NR1H3Q13133 447 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 RNF20Q5VTR2 975 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 MTMR14Q8NCE2 650 aa6.98□□□□□ -1.29
RNU4-49P-201ENST00000516080 INSM2Q96T92 566 aaPredicted RBP6.97□□□□□ -1.29
RNU4-49P-201ENST00000516080 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 GIGYF1O75420 1035 aaPredicted RBP6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 PTGIRP43119 386 aa6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 PTSQ03393 145 aa6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 ZNF395Q9H8N7 513 aaPredicted RBP6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 PRM3Q9NNZ6 103 aa6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 SNRKQ9NRH2 765 aa6.96□□□□□ -1.3
RNU4-49P-201ENST00000516080 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
RNU4-49P-201ENST00000516080 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
RNU4-49P-201ENST00000516080 CYLDQ9NQC7 956 aa6.95□□□□□ -1.3
RNU4-49P-201ENST00000516080 GPR37L1O60883 481 aa6.93□□□□□ -1.3
RNU4-49P-201ENST00000516080 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
RNU4-49P-201ENST00000516080 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
RNU4-49P-201ENST00000516080 RNF217Q8TC41 542 aa6.93□□□□□ -1.3
RNU4-49P-201ENST00000516080 ATP5J2-PTCD1G3V325 749 aa6.92□□□□□ -1.3
RNU4-49P-201ENST00000516080 ESF1Q9H501 851 aaKnown RBP6.92□□□□□ -1.3
RNU4-49P-201ENST00000516080 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
RNU4-49P-201ENST00000516080 ERVK-9P63128 1117 aa6.91□□□□□ -1.3
RNU4-49P-201ENST00000516080 CC2D2BQ6DHV5 1058 aa6.91□□□□□ -1.3
RNU4-49P-201ENST00000516080 NANOS1Q8WY41 292 aaKnown RBP6.91□□□□□ -1.3
RNU4-49P-201ENST00000516080 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
RNU4-49P-201ENST00000516080 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.3
RNU4-49P-201ENST00000516080 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
RNU4-49P-201ENST00000516080 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
RNU4-49P-201ENST00000516080 PCDHB11Q9Y5F2 797 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms