RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
SDHA-219ENST00000515815 EVA1CP58658 441 aa16.96■□□□□ 0.31
SDHA-219ENST00000515815 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
SDHA-219ENST00000515815 TMC1Q8TDI8 760 aa16.96■□□□□ 0.31
SDHA-219ENST00000515815 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.3
SDHA-219ENST00000515815 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
SDHA-219ENST00000515815 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
SDHA-219ENST00000515815 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
SDHA-219ENST00000515815 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
SDHA-219ENST00000515815 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
SDHA-219ENST00000515815 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
SDHA-219ENST00000515815 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
SDHA-219ENST00000515815 TESK2Q96S53 571 aa16.94■□□□□ 0.3
SDHA-219ENST00000515815 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
SDHA-219ENST00000515815 SOX12O15370 315 aa16.93■□□□□ 0.3
SDHA-219ENST00000515815 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
SDHA-219ENST00000515815 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
SDHA-219ENST00000515815 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
SDHA-219ENST00000515815 BARGINQ6ZT62 677 aa16.92■□□□□ 0.3
SDHA-219ENST00000515815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
SDHA-219ENST00000515815 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
SDHA-219ENST00000515815 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
SDHA-219ENST00000515815 WDR17Q8IZU2 1322 aa16.92■□□□□ 0.3
SDHA-219ENST00000515815 TNS2Q63HR2 1409 aa16.91■□□□□ 0.3
SDHA-219ENST00000515815 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
SDHA-219ENST00000515815 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
SDHA-219ENST00000515815 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
SDHA-219ENST00000515815 TMF1P82094 1093 aa16.9■□□□□ 0.3
SDHA-219ENST00000515815 NME9Q86XW9 330 aa16.9■□□□□ 0.3
SDHA-219ENST00000515815 BTAF1O14981 1849 aa16.89■□□□□ 0.29
SDHA-219ENST00000515815 BAG6P46379 1132 aa16.89■□□□□ 0.29
SDHA-219ENST00000515815 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
SDHA-219ENST00000515815 TOM1L2Q6ZVM7 507 aa16.88■□□□□ 0.29
SDHA-219ENST00000515815 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
SDHA-219ENST00000515815 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
SDHA-219ENST00000515815 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
SDHA-219ENST00000515815 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
SDHA-219ENST00000515815 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
SDHA-219ENST00000515815 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
SDHA-219ENST00000515815 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
SDHA-219ENST00000515815 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
SDHA-219ENST00000515815 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
SDHA-219ENST00000515815 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
SDHA-219ENST00000515815 ERBB3P21860 1342 aa16.84■□□□□ 0.29
SDHA-219ENST00000515815 RTL1A6NKG5 1358 aa16.84■□□□□ 0.29
SDHA-219ENST00000515815 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
SDHA-219ENST00000515815 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
SDHA-219ENST00000515815 FAM196AQ6ZSG2 479 aa16.83■□□□□ 0.28
SDHA-219ENST00000515815 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
SDHA-219ENST00000515815 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
SDHA-219ENST00000515815 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
SDHA-219ENST00000515815 CASZ1Q86V15 1759 aa16.8■□□□□ 0.28
SDHA-219ENST00000515815 DDB1Q16531 1140 aa16.8■□□□□ 0.28
SDHA-219ENST00000515815 COG3Q96JB2 828 aa16.8■□□□□ 0.28
SDHA-219ENST00000515815 CDCA7Q9BWT1 371 aaPredicted RBP16.8■□□□□ 0.28
SDHA-219ENST00000515815 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
SDHA-219ENST00000515815 TRIM37O94972 964 aa16.79■□□□□ 0.28
SDHA-219ENST00000515815 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
SDHA-219ENST00000515815 LY75O60449 1722 aa16.79■□□□□ 0.28
SDHA-219ENST00000515815 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
SDHA-219ENST00000515815 TUBGCP6Q96RT7 1819 aa16.78■□□□□ 0.28
SDHA-219ENST00000515815 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
SDHA-219ENST00000515815 BCL9O00512 1426 aa16.78■□□□□ 0.28
SDHA-219ENST00000515815 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
SDHA-219ENST00000515815 ITGB4P16144 1822 aa16.76■□□□□ 0.27
SDHA-219ENST00000515815 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
SDHA-219ENST00000515815 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
SDHA-219ENST00000515815 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
SDHA-219ENST00000515815 VIRMAQ69YN4 1812 aaKnown RBP16.75■□□□□ 0.27
SDHA-219ENST00000515815 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
SDHA-219ENST00000515815 NLRP2Q9NX02 1062 aa16.74■□□□□ 0.27
SDHA-219ENST00000515815 MEGF6O75095 1541 aa16.73■□□□□ 0.27
SDHA-219ENST00000515815 FLT4P35916 1363 aa16.73■□□□□ 0.27
SDHA-219ENST00000515815 APBA3O96018 575 aa16.72■□□□□ 0.27
SDHA-219ENST00000515815 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDHA-219ENST00000515815 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
SDHA-219ENST00000515815 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
SDHA-219ENST00000515815 KIF24Q5T7B8 1368 aa16.72■□□□□ 0.27
SDHA-219ENST00000515815 C5P01031 1676 aa16.72■□□□□ 0.27
SDHA-219ENST00000515815 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
SDHA-219ENST00000515815 IL2RBP14784 551 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 HOXC9P31274 260 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 AMPHP49418 695 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 IP6K1Q92551 441 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
SDHA-219ENST00000515815 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
SDHA-219ENST00000515815 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
SDHA-219ENST00000515815 FYB1O15117 783 aa16.68■□□□□ 0.26
SDHA-219ENST00000515815 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
SDHA-219ENST00000515815 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
SDHA-219ENST00000515815 INSRP06213 1382 aa16.67■□□□□ 0.26
SDHA-219ENST00000515815 EXOC5O00471 708 aa16.67■□□□□ 0.26
SDHA-219ENST00000515815 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
SDHA-219ENST00000515815 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
SDHA-219ENST00000515815 NSD2O96028 1365 aa16.66■□□□□ 0.26
SDHA-219ENST00000515815 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
SDHA-219ENST00000515815 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
SDHA-219ENST00000515815 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
SDHA-219ENST00000515815 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms