RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 CCDC116Q8IYX3 515 aa10□□□□□ -0.81
PHF3-211ENST00000514822 DACH1Q9UI36 760 aa10□□□□□ -0.81
PHF3-211ENST00000514822 TIMP2P16035 220 aa9.99□□□□□ -0.81
PHF3-211ENST00000514822 FLIIQ13045 1269 aa9.99□□□□□ -0.81
PHF3-211ENST00000514822 ZNF592Q92610 1267 aa9.99□□□□□ -0.81
PHF3-211ENST00000514822 PCDHB9Q9Y5E1 797 aa9.99□□□□□ -0.81
PHF3-211ENST00000514822 ZIC2O95409 532 aaPredicted RBP9.98□□□□□ -0.81
PHF3-211ENST00000514822 DHX9Q08211 1270 aaKnown RBP9.98□□□□□ -0.81
PHF3-211ENST00000514822 ZNF787Q6DD87 383 aa9.98□□□□□ -0.81
PHF3-211ENST00000514822 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
PHF3-211ENST00000514822 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
PHF3-211ENST00000514822 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
PHF3-211ENST00000514822 MCCD1P59942 119 aaPredicted RBP9.97□□□□□ -0.81
PHF3-211ENST00000514822 INTS6LQ5JSJ4 861 aaKnown RBP9.97□□□□□ -0.81
PHF3-211ENST00000514822 ITPKCQ96DU7 683 aa9.97□□□□□ -0.81
PHF3-211ENST00000514822 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
PHF3-211ENST00000514822 ABL2P42684 1182 aa9.95□□□□□ -0.82
PHF3-211ENST00000514822 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
PHF3-211ENST00000514822 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
PHF3-211ENST00000514822 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
PHF3-211ENST00000514822 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
PHF3-211ENST00000514822 IRF5Q13568 498 aa9.94□□□□□ -0.82
PHF3-211ENST00000514822 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
PHF3-211ENST00000514822 ESPNB1AK53 854 aa9.93□□□□□ -0.82
PHF3-211ENST00000514822 BMP1P13497 986 aa9.93□□□□□ -0.82
PHF3-211ENST00000514822 RAB15P59190 212 aa9.93□□□□□ -0.82
PHF3-211ENST00000514822 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
PHF3-211ENST00000514822 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
PHF3-211ENST00000514822 POTECB2RU33 542 aa9.92□□□□□ -0.82
PHF3-211ENST00000514822 RAD21O60216 631 aa9.92□□□□□ -0.82
PHF3-211ENST00000514822 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
PHF3-211ENST00000514822 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
PHF3-211ENST00000514822 TRIM46Q7Z4K8 759 aa9.92□□□□□ -0.82
PHF3-211ENST00000514822 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
PHF3-211ENST00000514822 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
PHF3-211ENST00000514822 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
PHF3-211ENST00000514822 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
PHF3-211ENST00000514822 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
PHF3-211ENST00000514822 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
PHF3-211ENST00000514822 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
PHF3-211ENST00000514822 VAC14Q08AM6 782 aa9.9□□□□□ -0.82
PHF3-211ENST00000514822 SCARF1Q14162 830 aa9.9□□□□□ -0.82
PHF3-211ENST00000514822 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
PHF3-211ENST00000514822 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
PHF3-211ENST00000514822 UPP2O95045 317 aa9.89□□□□□ -0.83
PHF3-211ENST00000514822 CCDC125Q86Z20 511 aa9.89□□□□□ -0.83
PHF3-211ENST00000514822 MEIOBQ8N635 442 aa9.89□□□□□ -0.83
PHF3-211ENST00000514822 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
PHF3-211ENST00000514822 POM121Q96HA1 1249 aa9.88□□□□□ -0.83
PHF3-211ENST00000514822 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
PHF3-211ENST00000514822 LINC00528Q8N1L1 170 aa9.87□□□□□ -0.83
PHF3-211ENST00000514822 ZFP42Q96MM3 310 aa9.87□□□□□ -0.83
PHF3-211ENST00000514822 CBLBQ13191 982 aa9.86□□□□□ -0.83
PHF3-211ENST00000514822 Q6ZVU0 165 aa9.86□□□□□ -0.83
PHF3-211ENST00000514822 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
PHF3-211ENST00000514822 PURBQ96QR8 312 aaKnown RBP9.86□□□□□ -0.83
PHF3-211ENST00000514822 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
PHF3-211ENST00000514822 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
PHF3-211ENST00000514822 BMP2P12643 396 aa9.84□□□□□ -0.83
PHF3-211ENST00000514822 SOX11P35716 441 aa9.84□□□□□ -0.83
PHF3-211ENST00000514822 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
PHF3-211ENST00000514822 SNRPBP14678 240 aaKnown RBP9.83□□□□□ -0.84
PHF3-211ENST00000514822 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
PHF3-211ENST00000514822 LILRA1O75019 489 aa9.82□□□□□ -0.84
PHF3-211ENST00000514822 CYLDQ9NQC7 956 aa9.82□□□□□ -0.84
PHF3-211ENST00000514822 PCDHB11Q9Y5F2 797 aa9.82□□□□□ -0.84
PHF3-211ENST00000514822 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
PHF3-211ENST00000514822 ADH1AP07327 375 aa9.8□□□□□ -0.84
PHF3-211ENST00000514822 CC2D2BQ6DHV5 1058 aa9.8□□□□□ -0.84
PHF3-211ENST00000514822 ADD1P35611 737 aaKnown RBP9.79□□□□□ -0.84
PHF3-211ENST00000514822 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
PHF3-211ENST00000514822 RELBQ01201 579 aa9.79□□□□□ -0.84
PHF3-211ENST00000514822 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
PHF3-211ENST00000514822 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
PHF3-211ENST00000514822 RNF135Q8IUD6 432 aa9.78□□□□□ -0.84
PHF3-211ENST00000514822 ESF1Q9H501 851 aaKnown RBP9.78□□□□□ -0.84
PHF3-211ENST00000514822 SPINT1O43278 529 aa9.77□□□□□ -0.85
PHF3-211ENST00000514822 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.85
PHF3-211ENST00000514822 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
PHF3-211ENST00000514822 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.85
PHF3-211ENST00000514822 PROSER2Q86WR7 435 aaPredicted RBP9.76□□□□□ -0.85
PHF3-211ENST00000514822 SOS2Q07890 1332 aaPredicted RBP9.76□□□□□ -0.85
PHF3-211ENST00000514822 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
PHF3-211ENST00000514822 MAN1A2O60476 641 aa9.75□□□□□ -0.85
PHF3-211ENST00000514822 PTGIRP43119 386 aa9.75□□□□□ -0.85
PHF3-211ENST00000514822 ALG2Q9H553 416 aa9.75□□□□□ -0.85
PHF3-211ENST00000514822 ZNF395Q9H8N7 513 aaPredicted RBP9.75□□□□□ -0.85
PHF3-211ENST00000514822 DOLKQ9UPQ8 538 aa9.75□□□□□ -0.85
PHF3-211ENST00000514822 TTLL8A6PVC2 850 aa9.74□□□□□ -0.85
PHF3-211ENST00000514822 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
PHF3-211ENST00000514822 SCTRP47872 440 aa9.74□□□□□ -0.85
PHF3-211ENST00000514822 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
PHF3-211ENST00000514822 A6NJR5 290 aa9.73□□□□□ -0.85
PHF3-211ENST00000514822 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
PHF3-211ENST00000514822 POM121CA8CG34 1229 aa9.73□□□□□ -0.85
PHF3-211ENST00000514822 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
PHF3-211ENST00000514822 KDF1Q8NAX2 398 aaPredicted RBP9.73□□□□□ -0.85
PHF3-211ENST00000514822 CDCA7Q9BWT1 371 aaPredicted RBP9.73□□□□□ -0.85
PHF3-211ENST00000514822 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
PHF3-211ENST00000514822 CHIC2Q9UKJ5 165 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms