RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 ABCC3O15438 1527 aa22.58■■□□□ 1.21
TNFRSF8-205ENST00000514649 GCC1Q96CN9 775 aa22.58■■□□□ 1.2
TNFRSF8-205ENST00000514649 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.2
TNFRSF8-205ENST00000514649 FCHSD2O94868 740 aa22.57■■□□□ 1.2
TNFRSF8-205ENST00000514649 TPM2P07951 284 aa22.57■■□□□ 1.2
TNFRSF8-205ENST00000514649 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
TNFRSF8-205ENST00000514649 PNPLA6Q8IY17 1366 aa22.57■■□□□ 1.2
TNFRSF8-205ENST00000514649 BRPF1P55201 1214 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF8-205ENST00000514649 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
TNFRSF8-205ENST00000514649 REREQ9P2R6 1566 aa22.56■■□□□ 1.2
TNFRSF8-205ENST00000514649 SKOR2Q2VWA4 1001 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF8-205ENST00000514649 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
TNFRSF8-205ENST00000514649 CD163L1Q9NR16 1453 aa22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 IDI1Q13907 227 aa22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 MED14O60244 1454 aa22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 K7ELQ4 463 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 VAMP4O75379 141 aa22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
TNFRSF8-205ENST00000514649 ATAD2Q6PL18 1390 aa22.54■■□□□ 1.2
TNFRSF8-205ENST00000514649 FBLN1P23142 703 aa22.54■■□□□ 1.2
TNFRSF8-205ENST00000514649 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
TNFRSF8-205ENST00000514649 ZNF428Q96B54 188 aa22.54■■□□□ 1.2
TNFRSF8-205ENST00000514649 PRAM1Q96QH2 718 aa22.54■■□□□ 1.2
TNFRSF8-205ENST00000514649 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
TNFRSF8-205ENST00000514649 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
TNFRSF8-205ENST00000514649 ANKRD26Q9UPS8 1709 aa22.52■■□□□ 1.2
TNFRSF8-205ENST00000514649 PIK3C2BO00750 1634 aa22.52■■□□□ 1.2
TNFRSF8-205ENST00000514649 TRIM44Q96DX7 344 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF8-205ENST00000514649 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
TNFRSF8-205ENST00000514649 ELL2O00472 640 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 HDGFL2Q7Z4V5 671 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 ARHGAP45Q92619 1136 aa22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 PDCL3Q9H2J4 239 aa22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 SSFA2P28290 1259 aa22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 CHMP4BQ9H444 224 aaKnown RBP22.51■■□□□ 1.19
TNFRSF8-205ENST00000514649 PTMSP20962 102 aa22.5■■□□□ 1.19
TNFRSF8-205ENST00000514649 CABP1Q9NZU7 370 aa22.5■■□□□ 1.19
TNFRSF8-205ENST00000514649 AGLP35573 1532 aa22.5■■□□□ 1.19
TNFRSF8-205ENST00000514649 LRRC7Q96NW7 1537 aa22.5■■□□□ 1.19
TNFRSF8-205ENST00000514649 HMOX1P09601 288 aa22.49■■□□□ 1.19
TNFRSF8-205ENST00000514649 MLECQ14165 292 aa22.49■■□□□ 1.19
TNFRSF8-205ENST00000514649 PTPRMP28827 1452 aa22.49■■□□□ 1.19
TNFRSF8-205ENST00000514649 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
TNFRSF8-205ENST00000514649 CDK19Q9BWU1 502 aa22.48■■□□□ 1.19
TNFRSF8-205ENST00000514649 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
TNFRSF8-205ENST00000514649 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
TNFRSF8-205ENST00000514649 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
TNFRSF8-205ENST00000514649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.47■■□□□ 1.19
TNFRSF8-205ENST00000514649 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
TNFRSF8-205ENST00000514649 ZFYVE9O95405 1425 aa22.46■■□□□ 1.19
TNFRSF8-205ENST00000514649 CDC45O75419 566 aa22.46■■□□□ 1.19
TNFRSF8-205ENST00000514649 ABCC4O15439 1325 aa22.45■■□□□ 1.18
TNFRSF8-205ENST00000514649 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
TNFRSF8-205ENST00000514649 GNAI1P63096 354 aa22.45■■□□□ 1.18
TNFRSF8-205ENST00000514649 GSPT1P15170 499 aaKnown RBP22.44■■□□□ 1.18
TNFRSF8-205ENST00000514649 GOLGA6L22H0YM25 854 aa22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 BAG4O95429 457 aaKnown RBP22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 CLEC17AQ6ZS10 378 aa22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 YTHDC2Q9H6S0 1430 aaKnown RBP22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 CALD1Q05682 793 aaKnown RBP22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 CDC42BPGQ6DT37 1551 aa22.43■■□□□ 1.18
TNFRSF8-205ENST00000514649 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 TWISTNBQ3B726 338 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 PLEKHM2Q8IWE5 1019 aa22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 AK9Q5TCS8 1911 aa22.42■■□□□ 1.18
TNFRSF8-205ENST00000514649 KLHL40Q2TBA0 621 aa22.41■■□□□ 1.18
TNFRSF8-205ENST00000514649 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
TNFRSF8-205ENST00000514649 CLTCQ00610 1675 aaKnown RBP22.41■■□□□ 1.18
TNFRSF8-205ENST00000514649 NASPP49321 788 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF8-205ENST00000514649 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
TNFRSF8-205ENST00000514649 MYO5BQ9ULV0 1848 aa22.4■■□□□ 1.18
TNFRSF8-205ENST00000514649 CCDC173Q0VFZ6 552 aa22.39■■□□□ 1.18
TNFRSF8-205ENST00000514649 C16orf71Q8IYS4 520 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 PPP1R9BQ96SB3 815 aa22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 ARHGAP31Q2M1Z3 1444 aa22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 TERF1P54274 439 aa22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 RABEP1Q15276 862 aa22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 API5Q9BZZ5 524 aaKnown RBP22.38■■□□□ 1.17
TNFRSF8-205ENST00000514649 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
TNFRSF8-205ENST00000514649 IL13P35225 146 aa22.37■■□□□ 1.17
TNFRSF8-205ENST00000514649 CFAP44Q96MT7 982 aa22.37■■□□□ 1.17
TNFRSF8-205ENST00000514649 MAP2P11137 1827 aaKnown RBP22.37■■□□□ 1.17
TNFRSF8-205ENST00000514649 TTC22Q5TAA0 569 aa22.36■■□□□ 1.17
TNFRSF8-205ENST00000514649 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
TNFRSF8-205ENST00000514649 USP26Q9BXU7 913 aa22.36■■□□□ 1.17
TNFRSF8-205ENST00000514649 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF8-205ENST00000514649 FAM83GA6ND36 823 aa22.35■■□□□ 1.17
TNFRSF8-205ENST00000514649 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 KIAA1211Q6ZU35 1233 aa22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 NUCB2P80303 420 aa22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 PKP1Q13835 747 aa22.33■■□□□ 1.17
TNFRSF8-205ENST00000514649 OTUD7AQ8TE49 926 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF8-205ENST00000514649 KNDC1Q76NI1 1749 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms