RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 WDR17Q8IZU2 1322 aa27.36■■□□□ 1.97
CCHCR1-230ENST00000513222 TNS1Q9HBL0 1735 aaKnown RBP27.36■■□□□ 1.97
CCHCR1-230ENST00000513222 LTN1O94822 1766 aa27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 OVOS2A0A0J9YW53 1432 aa27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 DISP2A7MBM2 1401 aa27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 OVOS2Q6IE36 1432 aa27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 NME9Q86XW9 330 aa27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.35■■□□□ 1.97
CCHCR1-230ENST00000513222 TMF1P82094 1093 aa27.34■■□□□ 1.97
CCHCR1-230ENST00000513222 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
CCHCR1-230ENST00000513222 FAM196AQ6ZSG2 479 aa27.33■■□□□ 1.97
CCHCR1-230ENST00000513222 USP35Q9P2H5 1018 aa27.33■■□□□ 1.97
CCHCR1-230ENST00000513222 ANKRD36BQ8N2N9 1353 aa27.33■■□□□ 1.97
CCHCR1-230ENST00000513222 SF3B2Q13435 895 aaKnown RBP27.32■■□□□ 1.96
CCHCR1-230ENST00000513222 DEFB132Q7Z7B7 95 aa27.31■■□□□ 1.96
CCHCR1-230ENST00000513222 CDCA8Q53HL2 280 aa27.3■■□□□ 1.96
CCHCR1-230ENST00000513222 CARD10Q9BWT7 1032 aa27.3■■□□□ 1.96
CCHCR1-230ENST00000513222 PEAK1Q9H792 1746 aa27.3■■□□□ 1.96
CCHCR1-230ENST00000513222 LRRC37A3O60309 1634 aa27.28■■□□□ 1.96
CCHCR1-230ENST00000513222 FAM182BQ5T319 152 aa27.28■■□□□ 1.96
CCHCR1-230ENST00000513222 C11orf95C9JLR9 678 aaPredicted RBP27.27■■□□□ 1.96
CCHCR1-230ENST00000513222 PDE3BQ13370 1112 aa27.26■■□□□ 1.95
CCHCR1-230ENST00000513222 TOM1L2Q6ZVM7 507 aa27.26■■□□□ 1.95
CCHCR1-230ENST00000513222 CDCA7Q9BWT1 371 aaPredicted RBP27.26■■□□□ 1.95
CCHCR1-230ENST00000513222 MYOM1P52179 1685 aa27.26■■□□□ 1.95
CCHCR1-230ENST00000513222 SBF2Q86WG5 1849 aa27.25■■□□□ 1.95
CCHCR1-230ENST00000513222 BAG6P46379 1132 aa27.25■■□□□ 1.95
CCHCR1-230ENST00000513222 BCL9O00512 1426 aa27.24■■□□□ 1.95
CCHCR1-230ENST00000513222 ZBTB7CA1YPR0 619 aa27.23■■□□□ 1.95
CCHCR1-230ENST00000513222 CCDC7Q96M83 1385 aa27.22■■□□□ 1.95
CCHCR1-230ENST00000513222 ERBB3P21860 1342 aa27.22■■□□□ 1.95
CCHCR1-230ENST00000513222 SOX12O15370 315 aa27.22■■□□□ 1.95
CCHCR1-230ENST00000513222 SRCAPQ6ZRS2 3230 aa27.2■■□□□ 1.94
CCHCR1-230ENST00000513222 CCER1Q8TC90 406 aaPredicted RBP27.2■■□□□ 1.94
CCHCR1-230ENST00000513222 FAM208AQ9UK61 1670 aaKnown RBP27.19■■□□□ 1.94
CCHCR1-230ENST00000513222 PARD3Q8TEW0 1356 aa27.19■■□□□ 1.94
CCHCR1-230ENST00000513222 FYB1O15117 783 aa27.18■■□□□ 1.94
CCHCR1-230ENST00000513222 IP6K1Q92551 441 aa27.18■■□□□ 1.94
CCHCR1-230ENST00000513222 OVOS2A0A0G2JMS6 1433 aa27.17■■□□□ 1.94
CCHCR1-230ENST00000513222 TRIM37O94972 964 aa27.17■■□□□ 1.94
CCHCR1-230ENST00000513222 DDB1Q16531 1140 aa27.17■■□□□ 1.94
CCHCR1-230ENST00000513222 COG3Q96JB2 828 aa27.17■■□□□ 1.94
CCHCR1-230ENST00000513222 CAMKK2Q96RR4 588 aa27.17■■□□□ 1.94
CCHCR1-230ENST00000513222 KIF20BQ96Q89 1820 aa27.16■■□□□ 1.94
CCHCR1-230ENST00000513222 EN1Q05925 392 aaPredicted RBP27.16■■□□□ 1.94
CCHCR1-230ENST00000513222 RGPD3A6NKT7 1758 aaPredicted RBP27.16■■□□□ 1.94
CCHCR1-230ENST00000513222 RGPD4Q7Z3J3 1758 aa27.16■■□□□ 1.94
CCHCR1-230ENST00000513222 RREB1Q92766 1687 aa27.15■■□□□ 1.94
CCHCR1-230ENST00000513222 CSB-PGBD3P0DP91 1061 aa27.14■■□□□ 1.94
CCHCR1-230ENST00000513222 CARD14Q9BXL6 1004 aa27.13■■□□□ 1.93
CCHCR1-230ENST00000513222 MAP3K19Q56UN5 1328 aa27.12■■□□□ 1.93
CCHCR1-230ENST00000513222 MARCH10Q8NA82 808 aaPredicted RBP27.11■■□□□ 1.93
CCHCR1-230ENST00000513222 ANKRD24Q8TF21 1146 aa27.11■■□□□ 1.93
CCHCR1-230ENST00000513222 TNS2Q63HR2 1409 aa27.1■■□□□ 1.93
CCHCR1-230ENST00000513222 RTL1A6NKG5 1358 aa27.09■■□□□ 1.93
CCHCR1-230ENST00000513222 APBA3O96018 575 aa27.09■■□□□ 1.93
CCHCR1-230ENST00000513222 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
CCHCR1-230ENST00000513222 EXOC5O00471 708 aa27.08■■□□□ 1.93
CCHCR1-230ENST00000513222 EZH2Q15910 746 aaKnown RBP27.08■■□□□ 1.93
CCHCR1-230ENST00000513222 HOXC9P31274 260 aa27.07■■□□□ 1.92
CCHCR1-230ENST00000513222 KIF24Q5T7B8 1368 aa27.07■■□□□ 1.92
CCHCR1-230ENST00000513222 NUP188Q5SRE5 1749 aa27.07■■□□□ 1.92
CCHCR1-230ENST00000513222 PLSCR1O15162 318 aa27.06■■□□□ 1.92
CCHCR1-230ENST00000513222 NLRP2Q9NX02 1062 aa27.06■■□□□ 1.92
CCHCR1-230ENST00000513222 BCL11BQ9C0K0 894 aaPredicted RBP27.05■■□□□ 1.92
CCHCR1-230ENST00000513222 GGNBP2Q9H3C7 697 aa27.05■■□□□ 1.92
CCHCR1-230ENST00000513222 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
CCHCR1-230ENST00000513222 IL2RBP14784 551 aa27.04■■□□□ 1.92
CCHCR1-230ENST00000513222 FBLN1P23142 703 aa27.04■■□□□ 1.92
CCHCR1-230ENST00000513222 LRP5O75197 1615 aa27.04■■□□□ 1.92
CCHCR1-230ENST00000513222 HSPA5P11021 654 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-230ENST00000513222 ANKRD26Q9UPS8 1709 aa27.03■■□□□ 1.92
CCHCR1-230ENST00000513222 NSD3Q9BZ95 1437 aa27.02■■□□□ 1.92
CCHCR1-230ENST00000513222 AMPHP49418 695 aa27■■□□□ 1.91
CCHCR1-230ENST00000513222 NHSQ6T4R5 1651 aa26.99■■□□□ 1.91
CCHCR1-230ENST00000513222 MAP2P11137 1827 aaKnown RBP26.99■■□□□ 1.91
CCHCR1-230ENST00000513222 INSRP06213 1382 aa26.97■■□□□ 1.91
CCHCR1-230ENST00000513222 RRS1Q15050 365 aaKnown RBP26.97■■□□□ 1.91
CCHCR1-230ENST00000513222 CGNL1Q0VF96 1302 aa26.96■■□□□ 1.91
CCHCR1-230ENST00000513222 PTF1AQ7RTS3 328 aa26.96■■□□□ 1.91
CCHCR1-230ENST00000513222 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
CCHCR1-230ENST00000513222 FLT4P35916 1363 aa26.95■■□□□ 1.9
CCHCR1-230ENST00000513222 PSDA5PKW4 1024 aaPredicted RBP26.92■■□□□ 1.9
CCHCR1-230ENST00000513222 PROM2Q8N271 834 aa26.92■■□□□ 1.9
CCHCR1-230ENST00000513222 R3HDM1Q15032 1099 aaKnown RBP26.91■■□□□ 1.9
CCHCR1-230ENST00000513222 LTV1Q96GA3 475 aaPredicted RBP26.91■■□□□ 1.9
CCHCR1-230ENST00000513222 KAT6BQ8WYB5 2073 aa26.91■■□□□ 1.9
CCHCR1-230ENST00000513222 NCAPD2Q15021 1401 aa26.9■■□□□ 1.9
CCHCR1-230ENST00000513222 HSP90AB2PQ58FF8 381 aa26.9■■□□□ 1.9
CCHCR1-230ENST00000513222 NBPF6Q5VWK0 638 aa26.9■■□□□ 1.9
CCHCR1-230ENST00000513222 NBPF4Q96M43 638 aa26.9■■□□□ 1.9
CCHCR1-230ENST00000513222 BTAF1O14981 1849 aa26.89■■□□□ 1.9
CCHCR1-230ENST00000513222 NBPF14Q5TI25 921 aa26.88■■□□□ 1.89
CCHCR1-230ENST00000513222 SMG6Q86US8 1419 aaKnown RBP26.88■■□□□ 1.89
CCHCR1-230ENST00000513222 WASHC2AQ641Q2 1341 aa26.88■■□□□ 1.89
CCHCR1-230ENST00000513222 MEGF6O75095 1541 aa26.87■■□□□ 1.89
CCHCR1-230ENST00000513222 KCNQ2O43526 872 aa26.87■■□□□ 1.89
CCHCR1-230ENST00000513222 PANK3Q9H999 370 aa26.86■■□□□ 1.89
CCHCR1-230ENST00000513222 NSD2O96028 1365 aa26.85■■□□□ 1.89
CCHCR1-230ENST00000513222 EMILIN1Q9Y6C2 1016 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms