RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
CLDND1-224ENST00000511667 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
CLDND1-224ENST00000511667 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
CLDND1-224ENST00000511667 CHRNA2Q15822 529 aa19.09■□□□□ 0.65
CLDND1-224ENST00000511667 AATKQ6ZMQ8 1374 aa19.08■□□□□ 0.65
CLDND1-224ENST00000511667 SLC24A1O60721 1099 aa19.08■□□□□ 0.64
CLDND1-224ENST00000511667 UTRNP46939 3433 aa19.08■□□□□ 0.64
CLDND1-224ENST00000511667 KTN1Q86UP2 1357 aaKnown RBP19.07■□□□□ 0.64
CLDND1-224ENST00000511667 NFAT5O94916 1531 aa19.07■□□□□ 0.64
CLDND1-224ENST00000511667 NLRP6P59044 892 aa19.07■□□□□ 0.64
CLDND1-224ENST00000511667 COL5A2P05997 1499 aaPredicted RBP19.06■□□□□ 0.64
CLDND1-224ENST00000511667 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
CLDND1-224ENST00000511667 SLC12A5Q9H2X9 1139 aa19.05■□□□□ 0.64
CLDND1-224ENST00000511667 USP47Q96K76 1375 aa19.05■□□□□ 0.64
CLDND1-224ENST00000511667 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
CLDND1-224ENST00000511667 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
CLDND1-224ENST00000511667 ARHGEF25Q86VW2 580 aa19.04■□□□□ 0.64
CLDND1-224ENST00000511667 ABCC6O95255 1503 aa19.04■□□□□ 0.64
CLDND1-224ENST00000511667 A0A1W2PP64 1363 aa19.04■□□□□ 0.64
CLDND1-224ENST00000511667 EDC4Q6P2E9 1401 aaKnown RBP19.03■□□□□ 0.64
CLDND1-224ENST00000511667 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
CLDND1-224ENST00000511667 CASZ1Q86V15 1759 aa19.03■□□□□ 0.64
CLDND1-224ENST00000511667 MYOM1P52179 1685 aa19.02■□□□□ 0.64
CLDND1-224ENST00000511667 GIGYF1O75420 1035 aaPredicted RBP19.02■□□□□ 0.64
CLDND1-224ENST00000511667 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
CLDND1-224ENST00000511667 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
CLDND1-224ENST00000511667 KCNH5Q8NCM2 988 aa19.01■□□□□ 0.63
CLDND1-224ENST00000511667 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
CLDND1-224ENST00000511667 SYT17Q9BSW7 474 aa19■□□□□ 0.63
CLDND1-224ENST00000511667 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
CLDND1-224ENST00000511667 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
CLDND1-224ENST00000511667 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
CLDND1-224ENST00000511667 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
CLDND1-224ENST00000511667 ZBTB7AO95365 584 aa18.99■□□□□ 0.63
CLDND1-224ENST00000511667 PTGER2P43116 358 aa18.99■□□□□ 0.63
CLDND1-224ENST00000511667 FHDC1Q9C0D6 1143 aaPredicted RBP18.99■□□□□ 0.63
CLDND1-224ENST00000511667 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
CLDND1-224ENST00000511667 AXIN2Q9Y2T1 843 aa18.99■□□□□ 0.63
CLDND1-224ENST00000511667 THRAP3Q9Y2W1 955 aaKnown RBP18.99■□□□□ 0.63
CLDND1-224ENST00000511667 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-224ENST00000511667 CRB1P82279 1406 aa18.98■□□□□ 0.63
CLDND1-224ENST00000511667 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
CLDND1-224ENST00000511667 PLSCR1O15162 318 aa18.97■□□□□ 0.63
CLDND1-224ENST00000511667 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-224ENST00000511667 NME9Q86XW9 330 aa18.96■□□□□ 0.63
CLDND1-224ENST00000511667 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
CLDND1-224ENST00000511667 TMC1Q8TDI8 760 aa18.96■□□□□ 0.63
CLDND1-224ENST00000511667 ANKRD36BQ8N2N9 1353 aa18.95■□□□□ 0.62
CLDND1-224ENST00000511667 EVA1CP58658 441 aa18.95■□□□□ 0.62
CLDND1-224ENST00000511667 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-224ENST00000511667 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-224ENST00000511667 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
CLDND1-224ENST00000511667 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
CLDND1-224ENST00000511667 TMF1P82094 1093 aa18.94■□□□□ 0.62
CLDND1-224ENST00000511667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLDND1-224ENST00000511667 BCL11BQ9C0K0 894 aaPredicted RBP18.94■□□□□ 0.62
CLDND1-224ENST00000511667 WNK3Q9BYP7 1800 aa18.92■□□□□ 0.62
CLDND1-224ENST00000511667 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
CLDND1-224ENST00000511667 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
CLDND1-224ENST00000511667 LTN1O94822 1766 aa18.9■□□□□ 0.62
CLDND1-224ENST00000511667 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
CLDND1-224ENST00000511667 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
CLDND1-224ENST00000511667 MTFR1LQ9H019 292 aa18.89■□□□□ 0.61
CLDND1-224ENST00000511667 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
CLDND1-224ENST00000511667 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
CLDND1-224ENST00000511667 BCL9O00512 1426 aa18.87■□□□□ 0.61
CLDND1-224ENST00000511667 ERBB3P21860 1342 aa18.87■□□□□ 0.61
CLDND1-224ENST00000511667 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-224ENST00000511667 SBF2Q86WG5 1849 aa18.86■□□□□ 0.61
CLDND1-224ENST00000511667 MAP3K5Q99683 1374 aa18.86■□□□□ 0.61
CLDND1-224ENST00000511667 GPR162Q16538 588 aa18.86■□□□□ 0.61
CLDND1-224ENST00000511667 SGIP1Q9BQI5 828 aa18.86■□□□□ 0.61
CLDND1-224ENST00000511667 FYB1O15117 783 aa18.85■□□□□ 0.61
CLDND1-224ENST00000511667 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-224ENST00000511667 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 SOX12O15370 315 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 SLC15A2Q16348 729 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 TOM1L2Q6ZVM7 507 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 PROM2Q8N271 834 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 ARXQ96QS3 562 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
CLDND1-224ENST00000511667 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.6
CLDND1-224ENST00000511667 IP6K1Q92551 441 aa18.83■□□□□ 0.6
CLDND1-224ENST00000511667 COG3Q96JB2 828 aa18.81■□□□□ 0.6
CLDND1-224ENST00000511667 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
CLDND1-224ENST00000511667 MAP3K19Q56UN5 1328 aa18.8■□□□□ 0.6
CLDND1-224ENST00000511667 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
CLDND1-224ENST00000511667 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
CLDND1-224ENST00000511667 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLDND1-224ENST00000511667 DDB1Q16531 1140 aa18.79■□□□□ 0.6
CLDND1-224ENST00000511667 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
CLDND1-224ENST00000511667 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
CLDND1-224ENST00000511667 TNS2Q63HR2 1409 aa18.78■□□□□ 0.6
CLDND1-224ENST00000511667 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
CLDND1-224ENST00000511667 PTF1AQ7RTS3 328 aa18.78■□□□□ 0.6
CLDND1-224ENST00000511667 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
CLDND1-224ENST00000511667 HOXC9P31274 260 aa18.77■□□□□ 0.6
CLDND1-224ENST00000511667 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.6
CLDND1-224ENST00000511667 FBLN1P23142 703 aa18.76■□□□□ 0.59
CLDND1-224ENST00000511667 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms