RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
PFDN1-203ENST00000510217 USP35Q9P2H5 1018 aa14.52□□□□□ -0.09
PFDN1-203ENST00000510217 MYOM1P52179 1685 aa14.52□□□□□ -0.09
PFDN1-203ENST00000510217 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.51□□□□□ -0.091e-6■■□□□ 12
PFDN1-203ENST00000510217 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
PFDN1-203ENST00000510217 HDGFL2Q7Z4V5 671 aaPredicted RBP14.5□□□□□ -0.09
PFDN1-203ENST00000510217 DEFB132Q7Z7B7 95 aa14.5□□□□□ -0.09
PFDN1-203ENST00000510217 ARHGEF25Q86VW2 580 aa14.5□□□□□ -0.09
PFDN1-203ENST00000510217 NME9Q86XW9 330 aa14.5□□□□□ -0.09
PFDN1-203ENST00000510217 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
PFDN1-203ENST00000510217 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
PFDN1-203ENST00000510217 SOX12O15370 315 aa14.49□□□□□ -0.09
PFDN1-203ENST00000510217 AXIN2Q9Y2T1 843 aa14.49□□□□□ -0.09
PFDN1-203ENST00000510217 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
PFDN1-203ENST00000510217 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
PFDN1-203ENST00000510217 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
PFDN1-203ENST00000510217 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
PFDN1-203ENST00000510217 TIMELESSQ9UNS1 1208 aa14.48□□□□□ -0.09
PFDN1-203ENST00000510217 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
PFDN1-203ENST00000510217 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
PFDN1-203ENST00000510217 KIF20BQ96Q89 1820 aa14.46□□□□□ -0.09
PFDN1-203ENST00000510217 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
PFDN1-203ENST00000510217 TMF1P82094 1093 aa14.45□□□□□ -0.1
PFDN1-203ENST00000510217 RREB1Q92766 1687 aa14.45□□□□□ -0.1
PFDN1-203ENST00000510217 SBF2Q86WG5 1849 aa14.44□□□□□ -0.1
PFDN1-203ENST00000510217 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
PFDN1-203ENST00000510217 FAM208AQ9UK61 1670 aaKnown RBP14.44□□□□□ -0.1
PFDN1-203ENST00000510217 BAG6P46379 1132 aa14.43□□□□□ -0.1
PFDN1-203ENST00000510217 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
PFDN1-203ENST00000510217 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
PFDN1-203ENST00000510217 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
PFDN1-203ENST00000510217 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
PFDN1-203ENST00000510217 RGPD3A6NKT7 1758 aaPredicted RBP14.42□□□□□ -0.1
PFDN1-203ENST00000510217 RGPD4Q7Z3J3 1758 aa14.42□□□□□ -0.1
PFDN1-203ENST00000510217 ERBB3P21860 1342 aa14.41□□□□□ -0.1
PFDN1-203ENST00000510217 TRIM37O94972 964 aa14.41□□□□□ -0.1
PFDN1-203ENST00000510217 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
PFDN1-203ENST00000510217 TNS2Q63HR2 1409 aa14.41□□□□□ -0.1
PFDN1-203ENST00000510217 CCDC7Q96M83 1385 aa14.4□□□□□ -0.1
PFDN1-203ENST00000510217 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
PFDN1-203ENST00000510217 EN1Q05925 392 aaPredicted RBP14.4□□□□□ -0.1
PFDN1-203ENST00000510217 CCER1Q8TC90 406 aaPredicted RBP14.4□□□□□ -0.1
PFDN1-203ENST00000510217 LRP5O75197 1615 aa14.38□□□□□ -0.11
PFDN1-203ENST00000510217 DDB1Q16531 1140 aa14.38□□□□□ -0.11
PFDN1-203ENST00000510217 CDCA8Q53HL2 280 aa14.38□□□□□ -0.11
PFDN1-203ENST00000510217 RGPD2P0DJD1 1756 aa14.37□□□□□ -0.11
PFDN1-203ENST00000510217 EZH2Q15910 746 aaKnown RBP14.37□□□□□ -0.11
PFDN1-203ENST00000510217 COG3Q96JB2 828 aa14.37□□□□□ -0.11
PFDN1-203ENST00000510217 CDCA7Q9BWT1 371 aaPredicted RBP14.37□□□□□ -0.11
PFDN1-203ENST00000510217 BCL9O00512 1426 aa14.37□□□□□ -0.11
PFDN1-203ENST00000510217 NSD3Q9BZ95 1437 aa14.37□□□□□ -0.11
PFDN1-203ENST00000510217 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 CAMKK2Q96RR4 588 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 NHSQ6T4R5 1651 aa14.36□□□□□ -0.11
PFDN1-203ENST00000510217 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 FYB1O15117 783 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 APBA3O96018 575 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 MARCH10Q8NA82 808 aaPredicted RBP14.35□□□□□ -0.11
PFDN1-203ENST00000510217 IP6K1Q92551 441 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
PFDN1-203ENST00000510217 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-203ENST00000510217 FBLN1P23142 703 aa14.34□□□□□ -0.11
PFDN1-203ENST00000510217 GGNBP2Q9H3C7 697 aa14.34□□□□□ -0.11
PFDN1-203ENST00000510217 NLRP2Q9NX02 1062 aa14.34□□□□□ -0.11
PFDN1-203ENST00000510217 SRCAPQ6ZRS2 3230 aa14.33□□□□□ -0.12
PFDN1-203ENST00000510217 HOXC9P31274 260 aa14.33□□□□□ -0.12
PFDN1-203ENST00000510217 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
PFDN1-203ENST00000510217 PSDA5PKW4 1024 aaPredicted RBP14.32□□□□□ -0.12
PFDN1-203ENST00000510217 HSPA5P11021 654 aaKnown RBP14.31□□□□□ -0.12
PFDN1-203ENST00000510217 IL2RBP14784 551 aa14.31□□□□□ -0.12
PFDN1-203ENST00000510217 RRS1Q15050 365 aaKnown RBP14.31□□□□□ -0.12
PFDN1-203ENST00000510217 PTF1AQ7RTS3 328 aa14.31□□□□□ -0.12
PFDN1-203ENST00000510217 EXOC5O00471 708 aa14.3□□□□□ -0.12
PFDN1-203ENST00000510217 AMPHP49418 695 aa14.3□□□□□ -0.12
PFDN1-203ENST00000510217 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
PFDN1-203ENST00000510217 MEGF6O75095 1541 aa14.3□□□□□ -0.12
PFDN1-203ENST00000510217 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
PFDN1-203ENST00000510217 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
PFDN1-203ENST00000510217 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
PFDN1-203ENST00000510217 BTAF1O14981 1849 aa14.29□□□□□ -0.12
PFDN1-203ENST00000510217 FLT4P35916 1363 aa14.28□□□□□ -0.12
PFDN1-203ENST00000510217 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
PFDN1-203ENST00000510217 SMG6Q86US8 1419 aaKnown RBP14.27□□□□□ -0.12
PFDN1-203ENST00000510217 KIF24Q5T7B8 1368 aa14.27□□□□□ -0.12
PFDN1-203ENST00000510217 INSRP06213 1382 aa14.26□□□□□ -0.13
PFDN1-203ENST00000510217 PLSCR1O15162 318 aa14.26□□□□□ -0.13
PFDN1-203ENST00000510217 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
PFDN1-203ENST00000510217 CASZ1Q86V15 1759 aa14.25□□□□□ -0.13
PFDN1-203ENST00000510217 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
PFDN1-203ENST00000510217 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
PFDN1-203ENST00000510217 PAPPAQ13219 1627 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms