RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SOX12O15370 315 aa14.94□□□□□ -0.02
DDX41-211ENST00000510171 CARD10Q9BWT7 1032 aa14.94□□□□□ -0.02
DDX41-211ENST00000510171 EXOC5O00471 708 aa14.93□□□□□ -0.02
DDX41-211ENST00000510171 PROM2Q8N271 834 aa14.93□□□□□ -0.02
DDX41-211ENST00000510171 ANO8Q9HCE9 1232 aaPredicted RBP14.93□□□□□ -0.02
DDX41-211ENST00000510171 SLIT3O75094 1523 aa14.92□□□□□ -0.02
DDX41-211ENST00000510171 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
DDX41-211ENST00000510171 NINLQ9Y2I6 1382 aa14.91□□□□□ -0.02
DDX41-211ENST00000510171 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
DDX41-211ENST00000510171 SIN3AQ96ST3 1273 aa14.9□□□□□ -0.02
DDX41-211ENST00000510171 BCL9O00512 1426 aa14.9□□□□□ -0.02
DDX41-211ENST00000510171 RREB1Q92766 1687 aa14.9□□□□□ -0.02
DDX41-211ENST00000510171 ZBTB7AO95365 584 aa14.89□□□□□ -0.03
DDX41-211ENST00000510171 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
DDX41-211ENST00000510171 TXNRD1Q16881 649 aa14.89□□□□□ -0.03
DDX41-211ENST00000510171 PDGFDQ9GZP0 370 aaPredicted RBP14.89□□□□□ -0.03
DDX41-211ENST00000510171 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
DDX41-211ENST00000510171 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
DDX41-211ENST00000510171 PARP4Q9UKK3 1724 aaKnown RBP14.89□□□□□ -0.03
DDX41-211ENST00000510171 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
DDX41-211ENST00000510171 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
DDX41-211ENST00000510171 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
DDX41-211ENST00000510171 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
DDX41-211ENST00000510171 SLC15A2Q16348 729 aa14.86□□□□□ -0.03
DDX41-211ENST00000510171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.86□□□□□ -0.03
DDX41-211ENST00000510171 PTGER2P43116 358 aa14.85□□□□□ -0.03
DDX41-211ENST00000510171 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
DDX41-211ENST00000510171 PEAK1Q9H792 1746 aa14.85□□□□□ -0.03
DDX41-211ENST00000510171 QRICH2Q9H0J4 1663 aa14.84□□□□□ -0.03
DDX41-211ENST00000510171 LRRC37A3O60309 1634 aa14.84□□□□□ -0.03
DDX41-211ENST00000510171 ACSBG1Q96GR2 724 aa14.83□□□□□ -0.04
DDX41-211ENST00000510171 PIK3C2AO00443 1686 aa14.83□□□□□ -0.04
DDX41-211ENST00000510171 COL18A1P39060 1754 aa14.83□□□□□ -0.04
DDX41-211ENST00000510171 IL2RBP14784 551 aa14.82□□□□□ -0.04
DDX41-211ENST00000510171 NME9Q86XW9 330 aa14.82□□□□□ -0.04
DDX41-211ENST00000510171 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
DDX41-211ENST00000510171 MTFR1LQ9H019 292 aa14.82□□□□□ -0.04
DDX41-211ENST00000510171 USP31Q70CQ4 1352 aa14.82□□□□□ -0.04
DDX41-211ENST00000510171 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
DDX41-211ENST00000510171 SYT17Q9BSW7 474 aa14.81□□□□□ -0.04
DDX41-211ENST00000510171 FHDC1Q9C0D6 1143 aaPredicted RBP14.81□□□□□ -0.04
DDX41-211ENST00000510171 ERBB3P21860 1342 aa14.81□□□□□ -0.04
DDX41-211ENST00000510171 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
DDX41-211ENST00000510171 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
DDX41-211ENST00000510171 SLC12A5Q9H2X9 1139 aa14.8□□□□□ -0.04
DDX41-211ENST00000510171 TNS2Q63HR2 1409 aa14.8□□□□□ -0.04
DDX41-211ENST00000510171 TRPM1Q7Z4N2 1603 aa14.8□□□□□ -0.04
DDX41-211ENST00000510171 NFAT5O94916 1531 aa14.79□□□□□ -0.04
DDX41-211ENST00000510171 RGPD3A6NKT7 1758 aaPredicted RBP14.78□□□□□ -0.04
DDX41-211ENST00000510171 RGPD4Q7Z3J3 1758 aa14.78□□□□□ -0.04
DDX41-211ENST00000510171 ARXQ96QS3 562 aa14.78□□□□□ -0.04
DDX41-211ENST00000510171 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
DDX41-211ENST00000510171 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
DDX41-211ENST00000510171 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.04
DDX41-211ENST00000510171 ABCC6O95255 1503 aa14.76□□□□□ -0.05
DDX41-211ENST00000510171 ZNF784Q8NCA9 323 aaPredicted RBP14.75□□□□□ -0.05
DDX41-211ENST00000510171 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
DDX41-211ENST00000510171 IP6K1Q92551 441 aa14.75□□□□□ -0.05
DDX41-211ENST00000510171 PUS7Q96PZ0 661 aaKnown RBP14.75□□□□□ -0.05
DDX41-211ENST00000510171 LRRC4BQ9NT99 713 aa14.75□□□□□ -0.05
DDX41-211ENST00000510171 SBF2Q86WG5 1849 aa14.75□□□□□ -0.05
DDX41-211ENST00000510171 CASZ1Q86V15 1759 aa14.75□□□□□ -0.05
DDX41-211ENST00000510171 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
DDX41-211ENST00000510171 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
DDX41-211ENST00000510171 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
DDX41-211ENST00000510171 CD163L1Q9NR16 1453 aa14.73□□□□□ -0.05
DDX41-211ENST00000510171 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
DDX41-211ENST00000510171 SLC16A10Q8TF71 515 aa14.72□□□□□ -0.05
DDX41-211ENST00000510171 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
DDX41-211ENST00000510171 AKAP12Q02952 1782 aa14.71□□□□□ -0.05
DDX41-211ENST00000510171 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
DDX41-211ENST00000510171 GPR162Q16538 588 aa14.7□□□□□ -0.06
DDX41-211ENST00000510171 SYTL4Q96C24 671 aaPredicted RBP14.7□□□□□ -0.06
DDX41-211ENST00000510171 COG3Q96JB2 828 aa14.7□□□□□ -0.06
DDX41-211ENST00000510171 A0A1W2PP64 1363 aa14.7□□□□□ -0.06
DDX41-211ENST00000510171 POLD1P28340 1107 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 AMPHP49418 695 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 TFCP2L1Q9NZI6 479 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 RGPD5Q99666 1765 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
DDX41-211ENST00000510171 MYOM1P52179 1685 aa14.68□□□□□ -0.06
DDX41-211ENST00000510171 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
DDX41-211ENST00000510171 HOXC9P31274 260 aa14.68□□□□□ -0.06
DDX41-211ENST00000510171 ZCRB1Q8TBF4 217 aaKnown RBP14.68□□□□□ -0.06
DDX41-211ENST00000510171 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
DDX41-211ENST00000510171 KCNQ4P56696 695 aa14.67□□□□□ -0.06
DDX41-211ENST00000510171 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
DDX41-211ENST00000510171 NHSQ6T4R5 1651 aa14.67□□□□□ -0.06
DDX41-211ENST00000510171 TONSLQ96HA7 1378 aa14.66□□□□□ -0.06
DDX41-211ENST00000510171 FBLN1P23142 703 aa14.66□□□□□ -0.06
DDX41-211ENST00000510171 TESK2Q96S53 571 aa14.66□□□□□ -0.06
DDX41-211ENST00000510171 MON2Q7Z3U7 1717 aa14.66□□□□□ -0.06
DDX41-211ENST00000510171 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
DDX41-211ENST00000510171 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
DDX41-211ENST00000510171 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
DDX41-211ENST00000510171 C1QTNF8P60827 252 aa14.64□□□□□ -0.07
DDX41-211ENST00000510171 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
DDX41-211ENST00000510171 CCNL1Q9UK58 526 aaPredicted RBP14.64□□□□□ -0.07
DDX41-211ENST00000510171 MSH5O43196 834 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms