RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	PLPP7	Q8NBV4	271 aa		5.66	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	GIGYF1	O75420	1035 aa	Predicted RBP	5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	NCOA4	Q13772	614 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PLA2G2C	Q5R387	149 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PPP1R18	Q6NYC8	613 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PLEKHM2	Q8IWE5	1019 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	KCTD17	Q8N5Z5	321 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SLC10A4	Q96EP9	437 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	MKRN1	Q9UHC7	482 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	UST	Q9Y2C2	406 aa		5.65	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	TRIM32	Q13049	653 aa		5.64	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	MAP7D1	Q3KQU3	841 aa		5.64	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ANKLE1	Q8NAG6	615 aa		5.64	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	RASA1	P20936	1047 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	RAB15	P59190	212 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	SKOR1	P84550	965 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	EML3	Q32P44	896 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	LARP1	Q6PKG0	1096 aa	Known RBP	5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	TRAF7	Q6Q0C0	670 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	C1QTNF2	Q9BXJ5	285 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	NOVA2	Q9UNW9	492 aa	Known RBP	5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	DOLK	Q9UPQ8	538 aa		5.63	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ATP5J2-PTCD1	G3V325	749 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	LZTS3	O60299	673 aa	Predicted RBP	5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	NBPF20	Q3BBV1	942 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CRTC2	Q53ET0	693 aa	Predicted RBP	5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	OXLD1	Q5BKU9	147 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	RNF20	Q5VTR2	975 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	STK32A	Q8WU08	396 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CHIC2	Q9UKJ5	165 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ZMIZ1	Q9ULJ6	1067 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	NOD1	Q9Y239	953 aa		5.62	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	TMEM88B	A6NKF7	163 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	FAM196B	A6NMK8	535 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L15	C9J2P7	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L10	C9JJH3	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L13	C9JLJ4	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L12	C9JPN9	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L11	C9JVI0	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L21	D6R901	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L18	D6R9N7	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L22	D6RA61	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L17	D6RBQ6	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L19	D6RCP7	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L20	D6RJB6	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	VARS	P26640	1264 aa	Known RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	WNT7B	P56706	349 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	USP17L24	Q0WX57	530 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ELOA	Q14241	798 aa	Known RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	TRMT44	Q8IYL2	757 aa	Known RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ZNF594	Q96JF6	807 aa	Predicted RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	KCTD15	Q96SI1	283 aa	Predicted RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	PCDHB11	Q9Y5F2	797 aa		5.61	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CD2BP2	O95400	341 aa	Known RBP	5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	BRD1	O95696	1058 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	RPIA	P49247	311 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	PTK7	Q13308	1070 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ARID5B	Q14865	1188 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	TMEM164	Q5U3C3	297 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	VASH1	Q7L8A9	365 aa	Predicted RBP	5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	TRIM50	Q86XT4	487 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	OGFOD1	Q8N543	542 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	EHBP1	Q8NDI1	1231 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	FAM200A	Q8TCP9	573 aa		5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CDV3	Q9UKY7	258 aa	Known RBP	5.6	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ESPN	B1AK53	854 aa		5.59	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	CLDN10	P78369	228 aa		5.59	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	RC3H1	Q5TC82	1133 aa	Known RBP	5.59	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	LIAT1	Q6ZQX7	453 aa		5.59	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	DNAAF2	Q9NVR5	837 aa	Known RBP	5.59	□□□□□ -1.51
CALCOCO2-216	ENST00000509784	ATP1A2	P50993	1020 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	GTF2I	P78347	998 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	DPYD	Q12882	1025 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	USP4	Q13107	963 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	ANKMY2	Q8IV38	441 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SEPT12	Q8IYM1	358 aa		5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	GZF1	Q9H116	711 aa	Predicted RBP	5.58	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	ERVH48-1	M5A8F1	160 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	PSME1	Q06323	249 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	KCNA1	Q09470	495 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	MMRN1	Q13201	1228 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	INTS6L	Q5JSJ4	861 aa	Known RBP	5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	LARGE2	Q8N3Y3	721 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	EMID1	Q96A84	441 aa	Predicted RBP	5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SIRT1	Q96EB6	747 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	KIAA1024	Q9UPX6	916 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	RBM19	Q9Y4C8	960 aa	Known RBP	5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	TLL2	Q9Y6L7	1015 aa		5.57	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	PATL2	C9JE40	543 aa	Known RBP	5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	ZBTB7B	O15156	539 aa	Predicted RBP	5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	MYC	P01106	439 aa	Predicted RBP	5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SLC19A1	P41440	591 aa		5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CCDC125	Q86Z20	511 aa		5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	TPCN2	Q8NHX9	752 aa		5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	ESF1	Q9H501	851 aa	Known RBP	5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	MAP4K5	Q9Y4K4	846 aa		5.56	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	PCDHGA11	Q9Y5H2	935 aa		5.56	□□□□□ -1.52

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