RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 TERF2IPQ9NYB0 399 aa29.9■■■□□ 2.38
LIN54-208ENST00000509748 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.38
LIN54-208ENST00000509748 SLC24A1O60721 1099 aa29.89■■■□□ 2.38
LIN54-208ENST00000509748 RGPD5Q99666 1765 aa29.88■■■□□ 2.37
LIN54-208ENST00000509748 WDR17Q8IZU2 1322 aa29.85■■■□□ 2.37
LIN54-208ENST00000509748 NINLQ9Y2I6 1382 aa29.85■■■□□ 2.37
LIN54-208ENST00000509748 FAM196AQ6ZSG2 479 aa29.84■■■□□ 2.37
LIN54-208ENST00000509748 RGPD1P0DJD0 1748 aa29.84■■■□□ 2.37
LIN54-208ENST00000509748 PARP4Q9UKK3 1724 aaKnown RBP29.83■■■□□ 2.37
LIN54-208ENST00000509748 PDE3BQ13370 1112 aa29.82■■■□□ 2.36
LIN54-208ENST00000509748 TOM1L2Q6ZVM7 507 aa29.82■■■□□ 2.36
LIN54-208ENST00000509748 BAG6P46379 1132 aa29.81■■■□□ 2.36
LIN54-208ENST00000509748 TNS1Q9HBL0 1735 aaKnown RBP29.81■■■□□ 2.36
LIN54-208ENST00000509748 SRCAPQ6ZRS2 3230 aa29.8■■■□□ 2.36
LIN54-208ENST00000509748 ABCC6O95255 1503 aa29.8■■■□□ 2.36
LIN54-208ENST00000509748 OVOS2A0A0J9YW53 1432 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 OVOS2Q6IE36 1432 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 TMF1P82094 1093 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 DISP2A7MBM2 1401 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 TRIM37O94972 964 aa29.77■■■□□ 2.36
LIN54-208ENST00000509748 EN1Q05925 392 aaPredicted RBP29.77■■■□□ 2.36
LIN54-208ENST00000509748 CARD10Q9BWT7 1032 aa29.77■■■□□ 2.36
LIN54-208ENST00000509748 ANKRD36BQ8N2N9 1353 aa29.76■■■□□ 2.35
LIN54-208ENST00000509748 LTN1O94822 1766 aa29.75■■■□□ 2.35
LIN54-208ENST00000509748 WNK3Q9BYP7 1800 aa29.74■■■□□ 2.35
LIN54-208ENST00000509748 LRRC37A3O60309 1634 aa29.73■■■□□ 2.35
LIN54-208ENST00000509748 CSB-PGBD3P0DP91 1061 aa29.72■■■□□ 2.35
LIN54-208ENST00000509748 PEAK1Q9H792 1746 aa29.71■■■□□ 2.35
LIN54-208ENST00000509748 DDB1Q16531 1140 aa29.7■■■□□ 2.35
LIN54-208ENST00000509748 CAMKK2Q96RR4 588 aa29.7■■■□□ 2.35
LIN54-208ENST00000509748 ERBB3P21860 1342 aa29.7■■■□□ 2.34
LIN54-208ENST00000509748 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
LIN54-208ENST00000509748 CDCA7Q9BWT1 371 aaPredicted RBP29.69■■■□□ 2.34
LIN54-208ENST00000509748 EZH2Q15910 746 aaKnown RBP29.68■■■□□ 2.34
LIN54-208ENST00000509748 CDCA8Q53HL2 280 aa29.68■■■□□ 2.34
LIN54-208ENST00000509748 APBA3O96018 575 aa29.67■■■□□ 2.34
LIN54-208ENST00000509748 CCDC7Q96M83 1385 aa29.66■■■□□ 2.34
LIN54-208ENST00000509748 MARCH10Q8NA82 808 aaPredicted RBP29.66■■■□□ 2.34
LIN54-208ENST00000509748 COG3Q96JB2 828 aa29.66■■■□□ 2.34
LIN54-208ENST00000509748 OVOS2A0A0G2JMS6 1433 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 FYB1O15117 783 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 FBLN1P23142 703 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 C11orf95C9JLR9 678 aaPredicted RBP29.64■■■□□ 2.34
LIN54-208ENST00000509748 ANKRD24Q8TF21 1146 aa29.64■■■□□ 2.34
LIN54-208ENST00000509748 IP6K1Q92551 441 aa29.64■■■□□ 2.34
LIN54-208ENST00000509748 SBF2Q86WG5 1849 aa29.64■■■□□ 2.33
LIN54-208ENST00000509748 MYOM1P52179 1685 aa29.63■■■□□ 2.33
LIN54-208ENST00000509748 NLRP2Q9NX02 1062 aa29.62■■■□□ 2.33
LIN54-208ENST00000509748 CARD14Q9BXL6 1004 aa29.61■■■□□ 2.33
LIN54-208ENST00000509748 MAP3K19Q56UN5 1328 aa29.61■■■□□ 2.33
LIN54-208ENST00000509748 PARD3Q8TEW0 1356 aa29.6■■■□□ 2.33
LIN54-208ENST00000509748 BCL9O00512 1426 aa29.6■■■□□ 2.33
LIN54-208ENST00000509748 PSDA5PKW4 1024 aaPredicted RBP29.59■■■□□ 2.33
LIN54-208ENST00000509748 EXOC5O00471 708 aa29.59■■■□□ 2.33
LIN54-208ENST00000509748 GGNBP2Q9H3C7 697 aa29.59■■■□□ 2.33
LIN54-208ENST00000509748 PTF1AQ7RTS3 328 aa29.58■■■□□ 2.33
LIN54-208ENST00000509748 RREB1Q92766 1687 aa29.56■■■□□ 2.32
LIN54-208ENST00000509748 HOXC9P31274 260 aa29.56■■■□□ 2.32
LIN54-208ENST00000509748 TNS2Q63HR2 1409 aa29.54■■■□□ 2.32
LIN54-208ENST00000509748 IL2RBP14784 551 aa29.53■■■□□ 2.32
LIN54-208ENST00000509748 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
LIN54-208ENST00000509748 KIF20BQ96Q89 1820 aa29.52■■■□□ 2.32
LIN54-208ENST00000509748 HSPA5P11021 654 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 R3HDM1Q15032 1099 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 RRS1Q15050 365 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 LTV1Q96GA3 475 aaPredicted RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 NUP188Q5SRE5 1749 aa29.51■■■□□ 2.32
LIN54-208ENST00000509748 AMPHP49418 695 aa29.51■■■□□ 2.31
LIN54-208ENST00000509748 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.31
LIN54-208ENST00000509748 NSD3Q9BZ95 1437 aa29.5■■■□□ 2.31
LIN54-208ENST00000509748 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
LIN54-208ENST00000509748 PLSCR1O15162 318 aa29.49■■■□□ 2.31
LIN54-208ENST00000509748 RTL1A6NKG5 1358 aa29.48■■■□□ 2.31
LIN54-208ENST00000509748 RGPD2P0DJD1 1756 aa29.47■■■□□ 2.31
LIN54-208ENST00000509748 RGPD3A6NKT7 1758 aaPredicted RBP29.47■■■□□ 2.31
LIN54-208ENST00000509748 RGPD4Q7Z3J3 1758 aa29.47■■■□□ 2.31
LIN54-208ENST00000509748 LRP5O75197 1615 aa29.45■■■□□ 2.3
LIN54-208ENST00000509748 PROM2Q8N271 834 aa29.44■■■□□ 2.3
LIN54-208ENST00000509748 KCNQ2O43526 872 aa29.43■■■□□ 2.3
LIN54-208ENST00000509748 NBPF6Q5VWK0 638 aa29.41■■■□□ 2.3
LIN54-208ENST00000509748 NBPF4Q96M43 638 aa29.41■■■□□ 2.3
LIN54-208ENST00000509748 HSP90AB2PQ58FF8 381 aa29.4■■■□□ 2.3
LIN54-208ENST00000509748 POLR3GLQ9BT43 218 aa29.4■■■□□ 2.3
LIN54-208ENST00000509748 NBPF14Q5TI25 921 aa29.39■■■□□ 2.3
LIN54-208ENST00000509748 NHSQ6T4R5 1651 aa29.39■■■□□ 2.3
LIN54-208ENST00000509748 INSRP06213 1382 aa29.39■■■□□ 2.29
LIN54-208ENST00000509748 KIF24Q5T7B8 1368 aa29.39■■■□□ 2.29
LIN54-208ENST00000509748 ACSBG1Q96GR2 724 aa29.38■■■□□ 2.29
LIN54-208ENST00000509748 CGNL1Q0VF96 1302 aa29.37■■■□□ 2.29
LIN54-208ENST00000509748 FLT4P35916 1363 aa29.37■■■□□ 2.29
LIN54-208ENST00000509748 EMILIN1Q9Y6C2 1016 aa29.36■■■□□ 2.29
LIN54-208ENST00000509748 MEGF6O75095 1541 aa29.35■■■□□ 2.29
LIN54-208ENST00000509748 KAT6BQ8WYB5 2073 aa29.35■■■□□ 2.29
LIN54-208ENST00000509748 DDX54Q8TDD1 881 aaKnown RBP29.34■■■□□ 2.29
LIN54-208ENST00000509748 USHBP1Q8N6Y0 703 aa29.33■■■□□ 2.29
LIN54-208ENST00000509748 ANO8Q9HCE9 1232 aaPredicted RBP29.33■■■□□ 2.29
LIN54-208ENST00000509748 SHANK3Q9BYB0 1731 aa29.33■■■□□ 2.29
LIN54-208ENST00000509748 TXNRD1Q16881 649 aa29.32■■■□□ 2.28
LIN54-208ENST00000509748 PANK3Q9H999 370 aa29.32■■■□□ 2.28
LIN54-208ENST00000509748 ZCRB1Q8TBF4 217 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms