RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 TERF2IPQ9NYB0 399 aa29.9■■■□□ 2.38
LIN54-208ENST00000509748 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.38
LIN54-208ENST00000509748 SLC24A1O60721 1099 aa29.89■■■□□ 2.38
LIN54-208ENST00000509748 RGPD5Q99666 1765 aa29.88■■■□□ 2.37
LIN54-208ENST00000509748 WDR17Q8IZU2 1322 aa29.85■■■□□ 2.37
LIN54-208ENST00000509748 NINLQ9Y2I6 1382 aa29.85■■■□□ 2.37
LIN54-208ENST00000509748 FAM196AQ6ZSG2 479 aa29.84■■■□□ 2.37
LIN54-208ENST00000509748 RGPD1P0DJD0 1748 aa29.84■■■□□ 2.37
LIN54-208ENST00000509748 PARP4Q9UKK3 1724 aaKnown RBP29.83■■■□□ 2.37
LIN54-208ENST00000509748 PDE3BQ13370 1112 aa29.82■■■□□ 2.36
LIN54-208ENST00000509748 TOM1L2Q6ZVM7 507 aa29.82■■■□□ 2.36
LIN54-208ENST00000509748 BAG6P46379 1132 aa29.81■■■□□ 2.36
LIN54-208ENST00000509748 TNS1Q9HBL0 1735 aaKnown RBP29.81■■■□□ 2.36
LIN54-208ENST00000509748 SRCAPQ6ZRS2 3230 aa29.8■■■□□ 2.36
LIN54-208ENST00000509748 ABCC6O95255 1503 aa29.8■■■□□ 2.36
LIN54-208ENST00000509748 OVOS2A0A0J9YW53 1432 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 OVOS2Q6IE36 1432 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 TMF1P82094 1093 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 DISP2A7MBM2 1401 aa29.79■■■□□ 2.36
LIN54-208ENST00000509748 TRIM37O94972 964 aa29.77■■■□□ 2.36
LIN54-208ENST00000509748 EN1Q05925 392 aaPredicted RBP29.77■■■□□ 2.36
LIN54-208ENST00000509748 CARD10Q9BWT7 1032 aa29.77■■■□□ 2.36
LIN54-208ENST00000509748 ANKRD36BQ8N2N9 1353 aa29.76■■■□□ 2.35
LIN54-208ENST00000509748 LTN1O94822 1766 aa29.75■■■□□ 2.35
LIN54-208ENST00000509748 WNK3Q9BYP7 1800 aa29.74■■■□□ 2.35
LIN54-208ENST00000509748 LRRC37A3O60309 1634 aa29.73■■■□□ 2.35
LIN54-208ENST00000509748 CSB-PGBD3P0DP91 1061 aa29.72■■■□□ 2.35
LIN54-208ENST00000509748 PEAK1Q9H792 1746 aa29.71■■■□□ 2.35
LIN54-208ENST00000509748 DDB1Q16531 1140 aa29.7■■■□□ 2.35
LIN54-208ENST00000509748 CAMKK2Q96RR4 588 aa29.7■■■□□ 2.35
LIN54-208ENST00000509748 ERBB3P21860 1342 aa29.7■■■□□ 2.34
LIN54-208ENST00000509748 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
LIN54-208ENST00000509748 CDCA7Q9BWT1 371 aaPredicted RBP29.69■■■□□ 2.34
LIN54-208ENST00000509748 EZH2Q15910 746 aaKnown RBP29.68■■■□□ 2.34
LIN54-208ENST00000509748 CDCA8Q53HL2 280 aa29.68■■■□□ 2.34
LIN54-208ENST00000509748 APBA3O96018 575 aa29.67■■■□□ 2.34
LIN54-208ENST00000509748 CCDC7Q96M83 1385 aa29.66■■■□□ 2.34
LIN54-208ENST00000509748 MARCH10Q8NA82 808 aaPredicted RBP29.66■■■□□ 2.34
LIN54-208ENST00000509748 COG3Q96JB2 828 aa29.66■■■□□ 2.34
LIN54-208ENST00000509748 OVOS2A0A0G2JMS6 1433 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 FYB1O15117 783 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 FBLN1P23142 703 aa29.65■■■□□ 2.34
LIN54-208ENST00000509748 C11orf95C9JLR9 678 aaPredicted RBP29.64■■■□□ 2.34
LIN54-208ENST00000509748 ANKRD24Q8TF21 1146 aa29.64■■■□□ 2.34
LIN54-208ENST00000509748 IP6K1Q92551 441 aa29.64■■■□□ 2.34
LIN54-208ENST00000509748 SBF2Q86WG5 1849 aa29.64■■■□□ 2.33
LIN54-208ENST00000509748 MYOM1P52179 1685 aa29.63■■■□□ 2.33
LIN54-208ENST00000509748 NLRP2Q9NX02 1062 aa29.62■■■□□ 2.33
LIN54-208ENST00000509748 CARD14Q9BXL6 1004 aa29.61■■■□□ 2.33
LIN54-208ENST00000509748 MAP3K19Q56UN5 1328 aa29.61■■■□□ 2.33
LIN54-208ENST00000509748 PARD3Q8TEW0 1356 aa29.6■■■□□ 2.33
LIN54-208ENST00000509748 BCL9O00512 1426 aa29.6■■■□□ 2.33
LIN54-208ENST00000509748 PSDA5PKW4 1024 aaPredicted RBP29.59■■■□□ 2.33
LIN54-208ENST00000509748 EXOC5O00471 708 aa29.59■■■□□ 2.33
LIN54-208ENST00000509748 GGNBP2Q9H3C7 697 aa29.59■■■□□ 2.33
LIN54-208ENST00000509748 PTF1AQ7RTS3 328 aa29.58■■■□□ 2.33
LIN54-208ENST00000509748 RREB1Q92766 1687 aa29.56■■■□□ 2.32
LIN54-208ENST00000509748 HOXC9P31274 260 aa29.56■■■□□ 2.32
LIN54-208ENST00000509748 TNS2Q63HR2 1409 aa29.54■■■□□ 2.32
LIN54-208ENST00000509748 IL2RBP14784 551 aa29.53■■■□□ 2.32
LIN54-208ENST00000509748 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
LIN54-208ENST00000509748 KIF20BQ96Q89 1820 aa29.52■■■□□ 2.32
LIN54-208ENST00000509748 HSPA5P11021 654 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 R3HDM1Q15032 1099 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 RRS1Q15050 365 aaKnown RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 LTV1Q96GA3 475 aaPredicted RBP29.52■■■□□ 2.32
LIN54-208ENST00000509748 NUP188Q5SRE5 1749 aa29.51■■■□□ 2.32
LIN54-208ENST00000509748 AMPHP49418 695 aa29.51■■■□□ 2.31
LIN54-208ENST00000509748 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.31
LIN54-208ENST00000509748 NSD3Q9BZ95 1437 aa29.5■■■□□ 2.31
LIN54-208ENST00000509748 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
LIN54-208ENST00000509748 PLSCR1O15162 318 aa29.49■■■□□ 2.31
LIN54-208ENST00000509748 RTL1A6NKG5 1358 aa29.48■■■□□ 2.31
LIN54-208ENST00000509748 RGPD2P0DJD1 1756 aa29.47■■■□□ 2.31
LIN54-208ENST00000509748 RGPD3A6NKT7 1758 aaPredicted RBP29.47■■■□□ 2.31
LIN54-208ENST00000509748 RGPD4Q7Z3J3 1758 aa29.47■■■□□ 2.31
LIN54-208ENST00000509748 LRP5O75197 1615 aa29.45■■■□□ 2.3
LIN54-208ENST00000509748 PROM2Q8N271 834 aa29.44■■■□□ 2.3
LIN54-208ENST00000509748 KCNQ2O43526 872 aa29.43■■■□□ 2.3
LIN54-208ENST00000509748 NBPF6Q5VWK0 638 aa29.41■■■□□ 2.3
LIN54-208ENST00000509748 NBPF4Q96M43 638 aa29.41■■■□□ 2.3
LIN54-208ENST00000509748 HSP90AB2PQ58FF8 381 aa29.4■■■□□ 2.3
LIN54-208ENST00000509748 POLR3GLQ9BT43 218 aa29.4■■■□□ 2.3
LIN54-208ENST00000509748 NBPF14Q5TI25 921 aa29.39■■■□□ 2.3
LIN54-208ENST00000509748 NHSQ6T4R5 1651 aa29.39■■■□□ 2.3
LIN54-208ENST00000509748 INSRP06213 1382 aa29.39■■■□□ 2.29
LIN54-208ENST00000509748 KIF24Q5T7B8 1368 aa29.39■■■□□ 2.29
LIN54-208ENST00000509748 ACSBG1Q96GR2 724 aa29.38■■■□□ 2.29
LIN54-208ENST00000509748 CGNL1Q0VF96 1302 aa29.37■■■□□ 2.29
LIN54-208ENST00000509748 FLT4P35916 1363 aa29.37■■■□□ 2.29
LIN54-208ENST00000509748 EMILIN1Q9Y6C2 1016 aa29.36■■■□□ 2.29
LIN54-208ENST00000509748 MEGF6O75095 1541 aa29.35■■■□□ 2.29
LIN54-208ENST00000509748 KAT6BQ8WYB5 2073 aa29.35■■■□□ 2.29
LIN54-208ENST00000509748 DDX54Q8TDD1 881 aaKnown RBP29.34■■■□□ 2.29
LIN54-208ENST00000509748 USHBP1Q8N6Y0 703 aa29.33■■■□□ 2.29
LIN54-208ENST00000509748 ANO8Q9HCE9 1232 aaPredicted RBP29.33■■■□□ 2.29
LIN54-208ENST00000509748 SHANK3Q9BYB0 1731 aa29.33■■■□□ 2.29
LIN54-208ENST00000509748 TXNRD1Q16881 649 aa29.32■■■□□ 2.28
LIN54-208ENST00000509748 PANK3Q9H999 370 aa29.32■■■□□ 2.28
LIN54-208ENST00000509748 ZCRB1Q8TBF4 217 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms