RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
SH3RF1-203ENST00000508685 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
SH3RF1-203ENST00000508685 FCHSD2O94868 740 aa14.19□□□□□ -0.14
SH3RF1-203ENST00000508685 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
SH3RF1-203ENST00000508685 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
SH3RF1-203ENST00000508685 ILDR1Q86SU0 546 aaPredicted RBP14.18□□□□□ -0.14
SH3RF1-203ENST00000508685 RIPK4P57078 832 aa14.17□□□□□ -0.14
SH3RF1-203ENST00000508685 AAMPQ13685 434 aa14.17□□□□□ -0.14
SH3RF1-203ENST00000508685 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
SH3RF1-203ENST00000508685 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
SH3RF1-203ENST00000508685 PIK3C2AO00443 1686 aa14.16□□□□□ -0.14
SH3RF1-203ENST00000508685 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
SH3RF1-203ENST00000508685 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
SH3RF1-203ENST00000508685 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 USP31Q70CQ4 1352 aa14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 MYH16Q9H6N6 1097 aa14.15□□□□□ -0.14
SH3RF1-203ENST00000508685 ADGRL3Q9HAR2 1447 aa14.14□□□□□ -0.15
SH3RF1-203ENST00000508685 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
SH3RF1-203ENST00000508685 HSP90AB2PQ58FF8 381 aa14.14□□□□□ -0.15
SH3RF1-203ENST00000508685 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
SH3RF1-203ENST00000508685 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
SH3RF1-203ENST00000508685 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
SH3RF1-203ENST00000508685 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
SH3RF1-203ENST00000508685 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
SH3RF1-203ENST00000508685 MAP3K19Q56UN5 1328 aa14.12□□□□□ -0.15
SH3RF1-203ENST00000508685 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
SH3RF1-203ENST00000508685 NEFMP07197 916 aa14.12□□□□□ -0.15
SH3RF1-203ENST00000508685 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
SH3RF1-203ENST00000508685 NLRP6P59044 892 aa14.11□□□□□ -0.15
SH3RF1-203ENST00000508685 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
SH3RF1-203ENST00000508685 C14orf37Q86TY3 774 aa14.11□□□□□ -0.15
SH3RF1-203ENST00000508685 FRAT1Q92837 279 aaPredicted RBP14.11□□□□□ -0.15
SH3RF1-203ENST00000508685 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
SH3RF1-203ENST00000508685 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-203ENST00000508685 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
SH3RF1-203ENST00000508685 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-203ENST00000508685 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-203ENST00000508685 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-203ENST00000508685 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 IL16Q14005 1332 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 TOM1O60784 492 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 ABTB2Q8N961 1025 aa14.09□□□□□ -0.15
SH3RF1-203ENST00000508685 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
SH3RF1-203ENST00000508685 FLT4P35916 1363 aa14.08□□□□□ -0.16
SH3RF1-203ENST00000508685 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 SBNO1A3KN83 1393 aa14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 FAM83GA6ND36 823 aa14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 C8orf34Q49A92 452 aa14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
SH3RF1-203ENST00000508685 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
SH3RF1-203ENST00000508685 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
SH3RF1-203ENST00000508685 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
SH3RF1-203ENST00000508685 AMPHP49418 695 aa14.05□□□□□ -0.16
SH3RF1-203ENST00000508685 SKAP1Q86WV1 359 aa14.05□□□□□ -0.16
SH3RF1-203ENST00000508685 RLBP1P12271 317 aa14.05□□□□□ -0.16
SH3RF1-203ENST00000508685 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 XPCQ01831 940 aaPredicted RBP14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 PSME1Q06323 249 aa14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 NCOA3Q9Y6Q9 1424 aa14.04□□□□□ -0.16
SH3RF1-203ENST00000508685 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
SH3RF1-203ENST00000508685 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
SH3RF1-203ENST00000508685 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
SH3RF1-203ENST00000508685 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
SH3RF1-203ENST00000508685 FOXO3O43524 673 aa14.03□□□□□ -0.16
SH3RF1-203ENST00000508685 ARHGEF10O15013 1369 aa14.02□□□□□ -0.16
SH3RF1-203ENST00000508685 MSH6P52701 1360 aa14.02□□□□□ -0.16
SH3RF1-203ENST00000508685 HOXC9P31274 260 aa14.02□□□□□ -0.16
SH3RF1-203ENST00000508685 EYA1Q99502 592 aa14.02□□□□□ -0.17
SH3RF1-203ENST00000508685 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
SH3RF1-203ENST00000508685 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
SH3RF1-203ENST00000508685 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
SH3RF1-203ENST00000508685 ZNF853P0CG23 659 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SH3RF1-203ENST00000508685 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 KDRP35968 1356 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 PLEKHG5O94827 1062 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 RGS3P49796 1198 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 GNAI1P63096 354 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 MCM10Q7L590 875 aa14□□□□□ -0.17
SH3RF1-203ENST00000508685 C1orf167Q5SNV9 1468 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 VIRMAQ69YN4 1812 aaKnown RBP13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 NFAT5O94916 1531 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 TSPYL6Q8N831 410 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 LTN1O94822 1766 aa13.99□□□□□ -0.17
SH3RF1-203ENST00000508685 TRIM27P14373 513 aa13.98□□□□□ -0.17
SH3RF1-203ENST00000508685 KIF24Q5T7B8 1368 aa13.98□□□□□ -0.17
SH3RF1-203ENST00000508685 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms