RNA–Protein interactions for RNA: ENST00000508682.5

RACK1-219, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-219ENST00000508682 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
RACK1-219ENST00000508682 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
RACK1-219ENST00000508682 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
RACK1-219ENST00000508682 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
RACK1-219ENST00000508682 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
RACK1-219ENST00000508682 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
RACK1-219ENST00000508682 C11orf95C9JLR9 678 aaPredicted RBP13.71□□□□□ -0.21
RACK1-219ENST00000508682 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
RACK1-219ENST00000508682 PTF1AQ7RTS3 328 aa13.71□□□□□ -0.21
RACK1-219ENST00000508682 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.22
RACK1-219ENST00000508682 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.22
RACK1-219ENST00000508682 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
RACK1-219ENST00000508682 TMF1P82094 1093 aa13.69□□□□□ -0.22
RACK1-219ENST00000508682 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
RACK1-219ENST00000508682 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
RACK1-219ENST00000508682 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
RACK1-219ENST00000508682 TIMELESSQ9UNS1 1208 aa13.69□□□□□ -0.22
RACK1-219ENST00000508682 CRB1P82279 1406 aa13.68□□□□□ -0.22
RACK1-219ENST00000508682 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
RACK1-219ENST00000508682 TOM1L2Q6ZVM7 507 aa13.68□□□□□ -0.22
RACK1-219ENST00000508682 MYOM1P52179 1685 aa13.68□□□□□ -0.22
RACK1-219ENST00000508682 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 FYB1O15117 783 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 TRIM37O94972 964 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
RACK1-219ENST00000508682 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
RACK1-219ENST00000508682 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
RACK1-219ENST00000508682 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
RACK1-219ENST00000508682 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
RACK1-219ENST00000508682 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
RACK1-219ENST00000508682 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
RACK1-219ENST00000508682 SLC34A2O95436 690 aa13.64□□□□□ -0.23
RACK1-219ENST00000508682 MARCH10Q8NA82 808 aaPredicted RBP13.64□□□□□ -0.23
RACK1-219ENST00000508682 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
RACK1-219ENST00000508682 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
RACK1-219ENST00000508682 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
RACK1-219ENST00000508682 LTN1O94822 1766 aa13.63□□□□□ -0.23
RACK1-219ENST00000508682 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
RACK1-219ENST00000508682 ERBB3P21860 1342 aa13.63□□□□□ -0.23
RACK1-219ENST00000508682 TNS1Q9HBL0 1735 aaKnown RBP13.62□□□□□ -0.23
RACK1-219ENST00000508682 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
RACK1-219ENST00000508682 EZH2Q15910 746 aaKnown RBP13.62□□□□□ -0.23
RACK1-219ENST00000508682 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
RACK1-219ENST00000508682 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
RACK1-219ENST00000508682 NINLQ9Y2I6 1382 aa13.61□□□□□ -0.23
RACK1-219ENST00000508682 COG3Q96JB2 828 aa13.61□□□□□ -0.23
RACK1-219ENST00000508682 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
RACK1-219ENST00000508682 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
RACK1-219ENST00000508682 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
RACK1-219ENST00000508682 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
RACK1-219ENST00000508682 HOXC9P31274 260 aa13.6□□□□□ -0.23
RACK1-219ENST00000508682 BAG6P46379 1132 aa13.6□□□□□ -0.23
RACK1-219ENST00000508682 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
RACK1-219ENST00000508682 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
RACK1-219ENST00000508682 IP6K1Q92551 441 aa13.6□□□□□ -0.23
RACK1-219ENST00000508682 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
RACK1-219ENST00000508682 APBA3O96018 575 aa13.59□□□□□ -0.23
RACK1-219ENST00000508682 DDB1Q16531 1140 aa13.59□□□□□ -0.23
RACK1-219ENST00000508682 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
RACK1-219ENST00000508682 CAMKK2Q96RR4 588 aa13.59□□□□□ -0.23
RACK1-219ENST00000508682 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
RACK1-219ENST00000508682 KCNQ2O43526 872 aa13.58□□□□□ -0.24
RACK1-219ENST00000508682 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
RACK1-219ENST00000508682 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.24
RACK1-219ENST00000508682 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
RACK1-219ENST00000508682 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
RACK1-219ENST00000508682 PANK3Q9H999 370 aa13.57□□□□□ -0.24
RACK1-219ENST00000508682 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
RACK1-219ENST00000508682 AMPHP49418 695 aa13.56□□□□□ -0.24
RACK1-219ENST00000508682 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
RACK1-219ENST00000508682 ABCC6O95255 1503 aa13.55□□□□□ -0.24
RACK1-219ENST00000508682 CAPN15O75808 1086 aa13.55□□□□□ -0.24
RACK1-219ENST00000508682 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
RACK1-219ENST00000508682 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
RACK1-219ENST00000508682 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
RACK1-219ENST00000508682 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
RACK1-219ENST00000508682 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
RACK1-219ENST00000508682 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 PROM2Q8N271 834 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 MEGF6O75095 1541 aa13.54□□□□□ -0.24
RACK1-219ENST00000508682 EXOC5O00471 708 aa13.53□□□□□ -0.24
RACK1-219ENST00000508682 IL2RBP14784 551 aa13.53□□□□□ -0.24
RACK1-219ENST00000508682 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
RACK1-219ENST00000508682 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
RACK1-219ENST00000508682 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
RACK1-219ENST00000508682 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
RACK1-219ENST00000508682 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
RACK1-219ENST00000508682 POLKQ9UBT6 870 aa13.51□□□□□ -0.25
RACK1-219ENST00000508682 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
RACK1-219ENST00000508682 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
RACK1-219ENST00000508682 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
RACK1-219ENST00000508682 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
RACK1-219ENST00000508682 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
RACK1-219ENST00000508682 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms