RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 ST20-MTHFSA0A0A6YYL1 179 aa29.4■■■□□ 2.3
CLDND1-216ENST00000507944 APBA3O96018 575 aa29.4■■■□□ 2.3
CLDND1-216ENST00000507944 EZH2Q15910 746 aaKnown RBP29.4■■■□□ 2.3
CLDND1-216ENST00000507944 PARP4Q9UKK3 1724 aaKnown RBP29.4■■■□□ 2.3
CLDND1-216ENST00000507944 USP31Q70CQ4 1352 aa29.39■■■□□ 2.3
CLDND1-216ENST00000507944 PSDA5PKW4 1024 aaPredicted RBP29.39■■■□□ 2.3
CLDND1-216ENST00000507944 NME9Q86XW9 330 aa29.39■■■□□ 2.3
CLDND1-216ENST00000507944 CAMKK2Q96RR4 588 aa29.39■■■□□ 2.3
CLDND1-216ENST00000507944 RGPD5Q99666 1765 aa29.39■■■□□ 2.29
CLDND1-216ENST00000507944 TESK2Q96S53 571 aa29.38■■■□□ 2.29
CLDND1-216ENST00000507944 TERF2IPQ9NYB0 399 aa29.38■■■□□ 2.29
CLDND1-216ENST00000507944 NFAT5O94916 1531 aa29.37■■■□□ 2.29
CLDND1-216ENST00000507944 CSB-PGBD3P0DP91 1061 aa29.37■■■□□ 2.29
CLDND1-216ENST00000507944 C11orf95C9JLR9 678 aaPredicted RBP29.35■■■□□ 2.29
CLDND1-216ENST00000507944 SLC24A1O60721 1099 aa29.35■■■□□ 2.29
CLDND1-216ENST00000507944 DDB1Q16531 1140 aa29.35■■■□□ 2.29
CLDND1-216ENST00000507944 CARD10Q9BWT7 1032 aa29.34■■■□□ 2.29
CLDND1-216ENST00000507944 CDCA7Q9BWT1 371 aaPredicted RBP29.33■■■□□ 2.29
CLDND1-216ENST00000507944 EDC4Q6P2E9 1401 aaKnown RBP29.33■■■□□ 2.29
CLDND1-216ENST00000507944 A0A1W2PP64 1363 aa29.32■■■□□ 2.28
CLDND1-216ENST00000507944 PARD3Q8TEW0 1356 aa29.31■■■□□ 2.28
CLDND1-216ENST00000507944 USP54Q70EL1 1684 aa29.31■■■□□ 2.28
CLDND1-216ENST00000507944 R3HDM1Q15032 1099 aaKnown RBP29.3■■■□□ 2.28
CLDND1-216ENST00000507944 OVOS2A0A0G2JMS6 1433 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 OVOS2A0A0J9YW53 1432 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 OVOS2Q6IE36 1432 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 NINLQ9Y2I6 1382 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 LRRC37A3O60309 1634 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 ABCC6O95255 1503 aa29.28■■■□□ 2.28
CLDND1-216ENST00000507944 WNK3Q9BYP7 1800 aa29.27■■■□□ 2.28
CLDND1-216ENST00000507944 CCDC7Q96M83 1385 aa29.26■■■□□ 2.27
CLDND1-216ENST00000507944 PEAK1Q9H792 1746 aa29.25■■■□□ 2.27
CLDND1-216ENST00000507944 MARCH10Q8NA82 808 aaPredicted RBP29.24■■■□□ 2.27
CLDND1-216ENST00000507944 EXOC5O00471 708 aa29.23■■■□□ 2.27
CLDND1-216ENST00000507944 LTN1O94822 1766 aa29.23■■■□□ 2.27
CLDND1-216ENST00000507944 USP47Q96K76 1375 aa29.23■■■□□ 2.27
CLDND1-216ENST00000507944 ERBB3P21860 1342 aa29.22■■■□□ 2.27
CLDND1-216ENST00000507944 SBF2Q86WG5 1849 aa29.22■■■□□ 2.27
CLDND1-216ENST00000507944 TMF1P82094 1093 aa29.22■■■□□ 2.27
CLDND1-216ENST00000507944 LRP5O75197 1615 aa29.22■■■□□ 2.27
CLDND1-216ENST00000507944 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
CLDND1-216ENST00000507944 RREB1Q92766 1687 aa29.19■■■□□ 2.26
CLDND1-216ENST00000507944 NBPF14Q5TI25 921 aa29.19■■■□□ 2.26
CLDND1-216ENST00000507944 ANKRD24Q8TF21 1146 aa29.19■■■□□ 2.26
CLDND1-216ENST00000507944 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
CLDND1-216ENST00000507944 BCL11BQ9C0K0 894 aaPredicted RBP29.19■■■□□ 2.26
CLDND1-216ENST00000507944 TIMELESSQ9UNS1 1208 aa29.19■■■□□ 2.26
CLDND1-216ENST00000507944 PLSCR1O15162 318 aa29.17■■■□□ 2.26
CLDND1-216ENST00000507944 PTF1AQ7RTS3 328 aa29.17■■■□□ 2.26
CLDND1-216ENST00000507944 COG3Q96JB2 828 aa29.17■■■□□ 2.26
CLDND1-216ENST00000507944 BCL9O00512 1426 aa29.17■■■□□ 2.26
CLDND1-216ENST00000507944 ANKRD36BQ8N2N9 1353 aa29.16■■■□□ 2.26
CLDND1-216ENST00000507944 NUP188Q5SRE5 1749 aa29.16■■■□□ 2.26
CLDND1-216ENST00000507944 IP6K1Q92551 441 aa29.15■■■□□ 2.26
CLDND1-216ENST00000507944 CLSPNQ9HAW4 1339 aa29.14■■■□□ 2.25
CLDND1-216ENST00000507944 IL2RBP14784 551 aa29.12■■■□□ 2.25
CLDND1-216ENST00000507944 CDCA8Q53HL2 280 aa29.12■■■□□ 2.25
CLDND1-216ENST00000507944 TNS2Q63HR2 1409 aa29.11■■■□□ 2.25
CLDND1-216ENST00000507944 FBLN1P23142 703 aa29.09■■■□□ 2.25
CLDND1-216ENST00000507944 LTV1Q96GA3 475 aaPredicted RBP29.09■■■□□ 2.25
CLDND1-216ENST00000507944 MAP3K19Q56UN5 1328 aa29.09■■■□□ 2.25
CLDND1-216ENST00000507944 KAT6BQ8WYB5 2073 aa29.09■■■□□ 2.25
CLDND1-216ENST00000507944 RGPD3A6NKT7 1758 aaPredicted RBP29.08■■■□□ 2.25
CLDND1-216ENST00000507944 RGPD4Q7Z3J3 1758 aa29.08■■■□□ 2.25
CLDND1-216ENST00000507944 FYB1O15117 783 aa29.07■■■□□ 2.24
CLDND1-216ENST00000507944 AMPHP49418 695 aa29.07■■■□□ 2.24
CLDND1-216ENST00000507944 HOXC9P31274 260 aa29.05■■■□□ 2.24
CLDND1-216ENST00000507944 PROM2Q8N271 834 aa29.05■■■□□ 2.24
CLDND1-216ENST00000507944 GGNBP2Q9H3C7 697 aa29.05■■■□□ 2.24
CLDND1-216ENST00000507944 KCNQ2O43526 872 aa29.04■■■□□ 2.24
CLDND1-216ENST00000507944 ACSBG1Q96GR2 724 aa29.02■■■□□ 2.24
CLDND1-216ENST00000507944 RRS1Q15050 365 aaKnown RBP29■■■□□ 2.23
CLDND1-216ENST00000507944 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
CLDND1-216ENST00000507944 TXNRD1Q16881 649 aa28.99■■■□□ 2.23
CLDND1-216ENST00000507944 ANO8Q9HCE9 1232 aaPredicted RBP28.99■■■□□ 2.23
CLDND1-216ENST00000507944 DDX54Q8TDD1 881 aaKnown RBP28.96■■■□□ 2.23
CLDND1-216ENST00000507944 CARD14Q9BXL6 1004 aa28.96■■■□□ 2.23
CLDND1-216ENST00000507944 RTL1A6NKG5 1358 aa28.96■■■□□ 2.23
CLDND1-216ENST00000507944 NHSQ6T4R5 1651 aa28.96■■■□□ 2.23
CLDND1-216ENST00000507944 SPON1Q9HCB6 807 aa28.95■■■□□ 2.22
CLDND1-216ENST00000507944 RGPD2P0DJD1 1756 aa28.94■■■□□ 2.22
CLDND1-216ENST00000507944 KIF20BQ96Q89 1820 aa28.93■■■□□ 2.22
CLDND1-216ENST00000507944 MYOM1P52179 1685 aa28.91■■■□□ 2.22
CLDND1-216ENST00000507944 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
CLDND1-216ENST00000507944 STK32BQ9NY57 414 aa28.91■■■□□ 2.22
CLDND1-216ENST00000507944 NBPF6Q5VWK0 638 aa28.9■■■□□ 2.22
CLDND1-216ENST00000507944 NBPF4Q96M43 638 aa28.9■■■□□ 2.22
CLDND1-216ENST00000507944 NSD3Q9BZ95 1437 aa28.9■■■□□ 2.22
CLDND1-216ENST00000507944 ZCRB1Q8TBF4 217 aaKnown RBP28.89■■■□□ 2.22
CLDND1-216ENST00000507944 BTAF1O14981 1849 aa28.88■■■□□ 2.21
CLDND1-216ENST00000507944 SLC15A2Q16348 729 aa28.88■■■□□ 2.21
CLDND1-216ENST00000507944 HSP90AB2PQ58FF8 381 aa28.88■■■□□ 2.21
CLDND1-216ENST00000507944 PDGFDQ9GZP0 370 aaPredicted RBP28.87■■■□□ 2.21
CLDND1-216ENST00000507944 PPP1R1BQ9UD71 204 aaPredicted RBP28.87■■■□□ 2.21
CLDND1-216ENST00000507944 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
CLDND1-216ENST00000507944 POLR3GLQ9BT43 218 aa28.86■■■□□ 2.21
CLDND1-216ENST00000507944 INSRP06213 1382 aa28.86■■■□□ 2.21
CLDND1-216ENST00000507944 USHBP1Q8N6Y0 703 aa28.85■■■□□ 2.21
CLDND1-216ENST00000507944 FLT4P35916 1363 aa28.85■■■□□ 2.21
CLDND1-216ENST00000507944 KIF24Q5T7B8 1368 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms