RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 COG3Q96JB2 828 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 CAMTA1Q9Y6Y1 1673 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 BRWD3Q6RI45 1802 aa10.65□□□□□ -0.71
SFXN1-206ENST00000507017 CCDC7Q96M83 1385 aa10.65□□□□□ -0.71
SFXN1-206ENST00000507017 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 WDR17Q8IZU2 1322 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 CD163L1Q9NR16 1453 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
SFXN1-206ENST00000507017 ARHGEF25Q86VW2 580 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 SLC12A5Q9H2X9 1139 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
SFXN1-206ENST00000507017 NFAT5O94916 1531 aa10.63□□□□□ -0.71
SFXN1-206ENST00000507017 USP35Q9P2H5 1018 aa10.63□□□□□ -0.71
SFXN1-206ENST00000507017 PARP4Q9UKK3 1724 aaKnown RBP10.62□□□□□ -0.71
SFXN1-206ENST00000507017 OVOS2A0A0J9YW53 1432 aa10.62□□□□□ -0.71
SFXN1-206ENST00000507017 OVOS2Q6IE36 1432 aa10.62□□□□□ -0.71
SFXN1-206ENST00000507017 LARP1Q6PKG0 1096 aaKnown RBP10.62□□□□□ -0.71
SFXN1-206ENST00000507017 PARD3Q8TEW0 1356 aa10.62□□□□□ -0.71
SFXN1-206ENST00000507017 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
SFXN1-206ENST00000507017 SOX12O15370 315 aa10.61□□□□□ -0.71
SFXN1-206ENST00000507017 NME9Q86XW9 330 aa10.61□□□□□ -0.71
SFXN1-206ENST00000507017 CARD10Q9BWT7 1032 aa10.61□□□□□ -0.71
SFXN1-206ENST00000507017 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
SFXN1-206ENST00000507017 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
SFXN1-206ENST00000507017 DISP2A7MBM2 1401 aa10.6□□□□□ -0.71
SFXN1-206ENST00000507017 SMG6Q86US8 1419 aaKnown RBP10.6□□□□□ -0.71
SFXN1-206ENST00000507017 DDB1Q16531 1140 aa10.6□□□□□ -0.71
SFXN1-206ENST00000507017 LTN1O94822 1766 aa10.6□□□□□ -0.71
SFXN1-206ENST00000507017 COL18A1P39060 1754 aa10.6□□□□□ -0.71
SFXN1-206ENST00000507017 KIF24Q5T7B8 1368 aa10.59□□□□□ -0.71
SFXN1-206ENST00000507017 ERBB3P21860 1342 aa10.58□□□□□ -0.71
SFXN1-206ENST00000507017 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.71
SFXN1-206ENST00000507017 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
SFXN1-206ENST00000507017 AMPHP49418 695 aa10.58□□□□□ -0.72
SFXN1-206ENST00000507017 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
SFXN1-206ENST00000507017 EXOC5O00471 708 aa10.57□□□□□ -0.72
SFXN1-206ENST00000507017 MSH5O43196 834 aa10.57□□□□□ -0.72
SFXN1-206ENST00000507017 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
SFXN1-206ENST00000507017 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
SFXN1-206ENST00000507017 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
SFXN1-206ENST00000507017 IP6K1Q92551 441 aa10.56□□□□□ -0.72
SFXN1-206ENST00000507017 BCL9O00512 1426 aa10.56□□□□□ -0.72
SFXN1-206ENST00000507017 TNS2Q63HR2 1409 aa10.56□□□□□ -0.72
SFXN1-206ENST00000507017 NSD2O96028 1365 aa10.55□□□□□ -0.72
SFXN1-206ENST00000507017 MYOM1P52179 1685 aa10.55□□□□□ -0.72
SFXN1-206ENST00000507017 IL2RBP14784 551 aa10.55□□□□□ -0.72
SFXN1-206ENST00000507017 AXIN2Q9Y2T1 843 aa10.55□□□□□ -0.72
SFXN1-206ENST00000507017 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
SFXN1-206ENST00000507017 FLT4P35916 1363 aa10.54□□□□□ -0.72
SFXN1-206ENST00000507017 TRIM37O94972 964 aa10.54□□□□□ -0.72
SFXN1-206ENST00000507017 HMGB2P26583 209 aaKnown RBP10.54□□□□□ -0.72
SFXN1-206ENST00000507017 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
SFXN1-206ENST00000507017 TNS1Q9HBL0 1735 aaKnown RBP10.54□□□□□ -0.72
SFXN1-206ENST00000507017 RGPD5Q99666 1765 aa10.54□□□□□ -0.72
SFXN1-206ENST00000507017 RGPD3A6NKT7 1758 aaPredicted RBP10.53□□□□□ -0.72
SFXN1-206ENST00000507017 RGPD4Q7Z3J3 1758 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 FYB1O15117 783 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 APBA3O96018 575 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 HSPA5P11021 654 aaKnown RBP10.53□□□□□ -0.72
SFXN1-206ENST00000507017 DEFB132Q7Z7B7 95 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 PIAS4Q8N2W9 510 aaPredicted RBP10.53□□□□□ -0.72
SFXN1-206ENST00000507017 POLR3GLQ9BT43 218 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 GGNBP2Q9H3C7 697 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
SFXN1-206ENST00000507017 HOXC9P31274 260 aa10.52□□□□□ -0.73
SFXN1-206ENST00000507017 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
SFXN1-206ENST00000507017 INSRP06213 1382 aa10.51□□□□□ -0.73
SFXN1-206ENST00000507017 EP400Q96L91 3159 aa10.51□□□□□ -0.73
SFXN1-206ENST00000507017 EN1Q05925 392 aaPredicted RBP10.5□□□□□ -0.73
SFXN1-206ENST00000507017 FAM182BQ5T319 152 aa10.5□□□□□ -0.73
SFXN1-206ENST00000507017 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
SFXN1-206ENST00000507017 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
SFXN1-206ENST00000507017 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
SFXN1-206ENST00000507017 ANKRD26Q9UPS8 1709 aa10.5□□□□□ -0.73
SFXN1-206ENST00000507017 PLSCR1O15162 318 aa10.49□□□□□ -0.73
SFXN1-206ENST00000507017 LTV1Q96GA3 475 aaPredicted RBP10.49□□□□□ -0.73
SFXN1-206ENST00000507017 KNSTRNQ9Y448 316 aa10.49□□□□□ -0.73
SFXN1-206ENST00000507017 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
SFXN1-206ENST00000507017 RREB1Q92766 1687 aa10.47□□□□□ -0.73
SFXN1-206ENST00000507017 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
SFXN1-206ENST00000507017 RRS1Q15050 365 aaKnown RBP10.47□□□□□ -0.73
SFXN1-206ENST00000507017 MARCH10Q8NA82 808 aaPredicted RBP10.47□□□□□ -0.73
SFXN1-206ENST00000507017 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
SFXN1-206ENST00000507017 SBF2Q86WG5 1849 aa10.47□□□□□ -0.73
SFXN1-206ENST00000507017 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.73
SFXN1-206ENST00000507017 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.73
SFXN1-206ENST00000507017 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
SFXN1-206ENST00000507017 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
SFXN1-206ENST00000507017 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
SFXN1-206ENST00000507017 LRP5O75197 1615 aa10.46□□□□□ -0.74
SFXN1-206ENST00000507017 WASHC2AQ641Q2 1341 aa10.45□□□□□ -0.74
SFXN1-206ENST00000507017 PPM1GO15355 546 aaPredicted RBP10.45□□□□□ -0.74
SFXN1-206ENST00000507017 ADRA2BP18089 450 aa10.45□□□□□ -0.74
SFXN1-206ENST00000507017 PANK3Q9H999 370 aa10.45□□□□□ -0.74
SFXN1-206ENST00000507017 MORC1Q86VD1 984 aa10.44□□□□□ -0.74
SFXN1-206ENST00000507017 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
SFXN1-206ENST00000507017 R3HDM1Q15032 1099 aaKnown RBP10.43□□□□□ -0.74
SFXN1-206ENST00000507017 DDX54Q8TDD1 881 aaKnown RBP10.43□□□□□ -0.74
SFXN1-206ENST00000507017 STK32BQ9NY57 414 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms