RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 DEFB132Q7Z7B7 95 aa14.65□□□□□ -0.06
NR1I3-222ENST00000506018 PARP4Q9UKK3 1724 aaKnown RBP14.65□□□□□ -0.06
NR1I3-222ENST00000506018 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
NR1I3-222ENST00000506018 C11orf95C9JLR9 678 aaPredicted RBP14.64□□□□□ -0.07
NR1I3-222ENST00000506018 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
NR1I3-222ENST00000506018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.64□□□□□ -0.07
NR1I3-222ENST00000506018 RGPD5Q99666 1765 aa14.64□□□□□ -0.07
NR1I3-222ENST00000506018 COL18A1P39060 1754 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 CLSPNQ9HAW4 1339 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 SOX12O15370 315 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 USP54Q70EL1 1684 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 ABCC6O95255 1503 aa14.63□□□□□ -0.07
NR1I3-222ENST00000506018 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
NR1I3-222ENST00000506018 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
NR1I3-222ENST00000506018 CSB-PGBD3P0DP91 1061 aa14.62□□□□□ -0.07
NR1I3-222ENST00000506018 FAM182BQ5T319 152 aa14.62□□□□□ -0.07
NR1I3-222ENST00000506018 TNS1Q9HBL0 1735 aaKnown RBP14.62□□□□□ -0.07
NR1I3-222ENST00000506018 ARHGEF25Q86VW2 580 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 CDCA7Q9BWT1 371 aaPredicted RBP14.61□□□□□ -0.07
NR1I3-222ENST00000506018 SLC12A5Q9H2X9 1139 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 LTN1O94822 1766 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 USP31Q70CQ4 1352 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 WNK3Q9BYP7 1800 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 WDR17Q8IZU2 1322 aa14.61□□□□□ -0.07
NR1I3-222ENST00000506018 TMF1P82094 1093 aa14.6□□□□□ -0.07
NR1I3-222ENST00000506018 CD163L1Q9NR16 1453 aa14.6□□□□□ -0.07
NR1I3-222ENST00000506018 NFAT5O94916 1531 aa14.6□□□□□ -0.07
NR1I3-222ENST00000506018 CDCA8Q53HL2 280 aa14.6□□□□□ -0.07
NR1I3-222ENST00000506018 DISP2A7MBM2 1401 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 A0A1W2PP64 1363 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 USP47Q96K76 1375 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 TRIM37O94972 964 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 EN1Q05925 392 aaPredicted RBP14.59□□□□□ -0.07
NR1I3-222ENST00000506018 NME9Q86XW9 330 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 TESK2Q96S53 571 aa14.59□□□□□ -0.07
NR1I3-222ENST00000506018 DDB1Q16531 1140 aa14.58□□□□□ -0.08
NR1I3-222ENST00000506018 PARD3Q8TEW0 1356 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 LRRC37A3O60309 1634 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 OVOS2A0A0J9YW53 1432 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 OVOS2Q6IE36 1432 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 APBA3O96018 575 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 CARD10Q9BWT7 1032 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 AXIN2Q9Y2T1 843 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 CCDC7Q96M83 1385 aa14.57□□□□□ -0.08
NR1I3-222ENST00000506018 COG3Q96JB2 828 aa14.55□□□□□ -0.08
NR1I3-222ENST00000506018 SBF2Q86WG5 1849 aa14.54□□□□□ -0.08
NR1I3-222ENST00000506018 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
NR1I3-222ENST00000506018 FAM208AQ9UK61 1670 aaKnown RBP14.53□□□□□ -0.08
NR1I3-222ENST00000506018 EXOC5O00471 708 aa14.52□□□□□ -0.08
NR1I3-222ENST00000506018 EZH2Q15910 746 aaKnown RBP14.52□□□□□ -0.08
NR1I3-222ENST00000506018 ERBB3P21860 1342 aa14.52□□□□□ -0.09
NR1I3-222ENST00000506018 PEAK1Q9H792 1746 aa14.52□□□□□ -0.09
NR1I3-222ENST00000506018 RREB1Q92766 1687 aa14.51□□□□□ -0.09
NR1I3-222ENST00000506018 NBPF14Q5TI25 921 aa14.51□□□□□ -0.09
NR1I3-222ENST00000506018 CAMKK2Q96RR4 588 aa14.51□□□□□ -0.09
NR1I3-222ENST00000506018 NLRP2Q9NX02 1062 aa14.51□□□□□ -0.09
NR1I3-222ENST00000506018 KAT6BQ8WYB5 2073 aa14.51□□□□□ -0.09
NR1I3-222ENST00000506018 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
NR1I3-222ENST00000506018 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
NR1I3-222ENST00000506018 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
NR1I3-222ENST00000506018 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
NR1I3-222ENST00000506018 PSDA5PKW4 1024 aaPredicted RBP14.49□□□□□ -0.09
NR1I3-222ENST00000506018 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
NR1I3-222ENST00000506018 LRP5O75197 1615 aa14.49□□□□□ -0.09
NR1I3-222ENST00000506018 AMPHP49418 695 aa14.48□□□□□ -0.09
NR1I3-222ENST00000506018 IP6K1Q92551 441 aa14.48□□□□□ -0.09
NR1I3-222ENST00000506018 NUP188Q5SRE5 1749 aa14.48□□□□□ -0.09
NR1I3-222ENST00000506018 BCL9O00512 1426 aa14.48□□□□□ -0.09
NR1I3-222ENST00000506018 TNS2Q63HR2 1409 aa14.48□□□□□ -0.09
NR1I3-222ENST00000506018 IL2RBP14784 551 aa14.47□□□□□ -0.09
NR1I3-222ENST00000506018 R3HDM1Q15032 1099 aaKnown RBP14.47□□□□□ -0.09
NR1I3-222ENST00000506018 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
NR1I3-222ENST00000506018 MARCH10Q8NA82 808 aaPredicted RBP14.47□□□□□ -0.09
NR1I3-222ENST00000506018 PLSCR1O15162 318 aa14.46□□□□□ -0.1
NR1I3-222ENST00000506018 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
NR1I3-222ENST00000506018 SRCAPQ6ZRS2 3230 aa14.45□□□□□ -0.1
NR1I3-222ENST00000506018 MYOM1P52179 1685 aa14.45□□□□□ -0.1
NR1I3-222ENST00000506018 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
NR1I3-222ENST00000506018 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
NR1I3-222ENST00000506018 SMG6Q86US8 1419 aaKnown RBP14.44□□□□□ -0.1
NR1I3-222ENST00000506018 FYB1O15117 783 aa14.44□□□□□ -0.1
NR1I3-222ENST00000506018 HOXC9P31274 260 aa14.44□□□□□ -0.1
NR1I3-222ENST00000506018 GGNBP2Q9H3C7 697 aa14.44□□□□□ -0.1
NR1I3-222ENST00000506018 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
NR1I3-222ENST00000506018 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
NR1I3-222ENST00000506018 RGPD2P0DJD1 1756 aa14.41□□□□□ -0.1
NR1I3-222ENST00000506018 POLR3GLQ9BT43 218 aa14.41□□□□□ -0.1
NR1I3-222ENST00000506018 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
NR1I3-222ENST00000506018 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
NR1I3-222ENST00000506018 CGNL1Q0VF96 1302 aa14.39□□□□□ -0.11
NR1I3-222ENST00000506018 RRS1Q15050 365 aaKnown RBP14.39□□□□□ -0.11
NR1I3-222ENST00000506018 FLT4P35916 1363 aa14.39□□□□□ -0.11
NR1I3-222ENST00000506018 BTAF1O14981 1849 aa14.38□□□□□ -0.11
NR1I3-222ENST00000506018 MAP2P11137 1827 aaKnown RBP14.38□□□□□ -0.11
NR1I3-222ENST00000506018 FBLN1P23142 703 aa14.37□□□□□ -0.11
NR1I3-222ENST00000506018 ACSBG1Q96GR2 724 aa14.37□□□□□ -0.11
NR1I3-222ENST00000506018 INSRP06213 1382 aa14.37□□□□□ -0.11
NR1I3-222ENST00000506018 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms