RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
NEDD9-210ENST00000505589 EVC2Q86UK5 1308 aa14.25□□□□□ -0.13
NEDD9-210ENST00000505589 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
NEDD9-210ENST00000505589 NRKQ7Z2Y5 1582 aa14.25□□□□□ -0.13
NEDD9-210ENST00000505589 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
NEDD9-210ENST00000505589 ZBTB7AO95365 584 aa14.24□□□□□ -0.13
NEDD9-210ENST00000505589 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
NEDD9-210ENST00000505589 PROM2Q8N271 834 aa14.24□□□□□ -0.13
NEDD9-210ENST00000505589 MARCH10Q8NA82 808 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-210ENST00000505589 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
NEDD9-210ENST00000505589 TTC21AQ8NDW8 1320 aa14.23□□□□□ -0.13
NEDD9-210ENST00000505589 NBPF1Q3BBV0 1214 aa14.23□□□□□ -0.13
NEDD9-210ENST00000505589 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
NEDD9-210ENST00000505589 RGPD3A6NKT7 1758 aaPredicted RBP14.23□□□□□ -0.13
NEDD9-210ENST00000505589 RGPD4Q7Z3J3 1758 aa14.23□□□□□ -0.13
NEDD9-210ENST00000505589 USP6P35125 1406 aa14.23□□□□□ -0.13
NEDD9-210ENST00000505589 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
NEDD9-210ENST00000505589 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
NEDD9-210ENST00000505589 TOPAZ1Q8N9V7 1692 aa14.21□□□□□ -0.13
NEDD9-210ENST00000505589 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
NEDD9-210ENST00000505589 PTGER2P43116 358 aa14.21□□□□□ -0.13
NEDD9-210ENST00000505589 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
NEDD9-210ENST00000505589 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
NEDD9-210ENST00000505589 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
NEDD9-210ENST00000505589 FHDC1Q9C0D6 1143 aaPredicted RBP14.2□□□□□ -0.14
NEDD9-210ENST00000505589 TTC21BQ7Z4L5 1316 aa14.19□□□□□ -0.14
NEDD9-210ENST00000505589 SLC16A10Q8TF71 515 aa14.19□□□□□ -0.14
NEDD9-210ENST00000505589 ARXQ96QS3 562 aa14.19□□□□□ -0.14
NEDD9-210ENST00000505589 SLIT3O75094 1523 aa14.17□□□□□ -0.14
NEDD9-210ENST00000505589 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
NEDD9-210ENST00000505589 UTRNP46939 3433 aa14.17□□□□□ -0.14
NEDD9-210ENST00000505589 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
NEDD9-210ENST00000505589 SBF2Q86WG5 1849 aa14.16□□□□□ -0.14
NEDD9-210ENST00000505589 IL2RBP14784 551 aa14.16□□□□□ -0.14
NEDD9-210ENST00000505589 POLD1P28340 1107 aa14.16□□□□□ -0.14
NEDD9-210ENST00000505589 C1QTNF8P60827 252 aa14.16□□□□□ -0.14
NEDD9-210ENST00000505589 SOX12O15370 315 aa14.15□□□□□ -0.14
NEDD9-210ENST00000505589 GPR162Q16538 588 aa14.15□□□□□ -0.14
NEDD9-210ENST00000505589 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
NEDD9-210ENST00000505589 PTF1AQ7RTS3 328 aa14.15□□□□□ -0.14
NEDD9-210ENST00000505589 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-210ENST00000505589 MAP3K5Q99683 1374 aa14.14□□□□□ -0.15
NEDD9-210ENST00000505589 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
NEDD9-210ENST00000505589 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
NEDD9-210ENST00000505589 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
NEDD9-210ENST00000505589 LRRC37A3O60309 1634 aa14.13□□□□□ -0.15
NEDD9-210ENST00000505589 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
NEDD9-210ENST00000505589 CASZ1Q86V15 1759 aa14.13□□□□□ -0.15
NEDD9-210ENST00000505589 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
NEDD9-210ENST00000505589 HDGFL2Q7Z4V5 671 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-210ENST00000505589 COL18A1P39060 1754 aa14.11□□□□□ -0.15
NEDD9-210ENST00000505589 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
NEDD9-210ENST00000505589 ABCC6O95255 1503 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 TNS2Q63HR2 1409 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 GRIN3BO60391 1043 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 L3MBTL2Q969R5 705 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 ERBB3P21860 1342 aa14.1□□□□□ -0.15
NEDD9-210ENST00000505589 CHD4Q14839 1912 aa14.09□□□□□ -0.15
NEDD9-210ENST00000505589 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
NEDD9-210ENST00000505589 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
NEDD9-210ENST00000505589 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
NEDD9-210ENST00000505589 QRICH2Q9H0J4 1663 aa14.08□□□□□ -0.16
NEDD9-210ENST00000505589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.16
NEDD9-210ENST00000505589 TERF2IPQ9NYB0 399 aa14.08□□□□□ -0.16
NEDD9-210ENST00000505589 TFCP2L1Q9NZI6 479 aa14.08□□□□□ -0.16
NEDD9-210ENST00000505589 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
NEDD9-210ENST00000505589 TRPM1Q7Z4N2 1603 aa14.07□□□□□ -0.16
NEDD9-210ENST00000505589 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
NEDD9-210ENST00000505589 PUS7Q96PZ0 661 aaKnown RBP14.06□□□□□ -0.16
NEDD9-210ENST00000505589 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
NEDD9-210ENST00000505589 MYOM1P52179 1685 aa14.06□□□□□ -0.16
NEDD9-210ENST00000505589 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
NEDD9-210ENST00000505589 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
NEDD9-210ENST00000505589 DDX54Q8TDD1 881 aaKnown RBP14.05□□□□□ -0.16
NEDD9-210ENST00000505589 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
NEDD9-210ENST00000505589 KAT6BQ8WYB5 2073 aa14.04□□□□□ -0.16
NEDD9-210ENST00000505589 IP6K1Q92551 441 aa14.04□□□□□ -0.16
NEDD9-210ENST00000505589 WNK3Q9BYP7 1800 aa14.04□□□□□ -0.16
NEDD9-210ENST00000505589 FLAD1Q8NFF5 587 aa14.03□□□□□ -0.16
NEDD9-210ENST00000505589 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
NEDD9-210ENST00000505589 LRRC4BQ9NT99 713 aa14.03□□□□□ -0.16
NEDD9-210ENST00000505589 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
NEDD9-210ENST00000505589 SBNO2Q9Y2G9 1366 aa14.02□□□□□ -0.17
NEDD9-210ENST00000505589 ZNF827Q17R98 1081 aa14.02□□□□□ -0.17
NEDD9-210ENST00000505589 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
NEDD9-210ENST00000505589 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
NEDD9-210ENST00000505589 NFAT5O94916 1531 aa14.01□□□□□ -0.17
NEDD9-210ENST00000505589 NME9Q86XW9 330 aa14.01□□□□□ -0.17
NEDD9-210ENST00000505589 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
NEDD9-210ENST00000505589 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
NEDD9-210ENST00000505589 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
NEDD9-210ENST00000505589 NEUROD1Q13562 356 aa14□□□□□ -0.17
NEDD9-210ENST00000505589 COG3Q96JB2 828 aa14□□□□□ -0.17
NEDD9-210ENST00000505589 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
NEDD9-210ENST00000505589 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
NEDD9-210ENST00000505589 AMPHP49418 695 aa13.99□□□□□ -0.17
NEDD9-210ENST00000505589 SLC12A5Q9H2X9 1139 aa13.99□□□□□ -0.17
NEDD9-210ENST00000505589 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
NEDD9-210ENST00000505589 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms