RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 TMEM94Q12767 1356 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 DCCP43146 1447 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF28-206ENST00000504003 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
ARHGEF28-206ENST00000504003 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
ARHGEF28-206ENST00000504003 ANP32CO43423 234 aa12.58□□□□□ -0.4
ARHGEF28-206ENST00000504003 PANK3Q9H999 370 aa12.58□□□□□ -0.4
ARHGEF28-206ENST00000504003 FMN2Q9NZ56 1722 aa12.58□□□□□ -0.4
ARHGEF28-206ENST00000504003 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
ARHGEF28-206ENST00000504003 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF28-206ENST00000504003 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
ARHGEF28-206ENST00000504003 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
ARHGEF28-206ENST00000504003 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
ARHGEF28-206ENST00000504003 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
ARHGEF28-206ENST00000504003 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
ARHGEF28-206ENST00000504003 ATP7BP35670 1465 aa12.56□□□□□ -0.4
ARHGEF28-206ENST00000504003 MYOM1P52179 1685 aa12.56□□□□□ -0.4
ARHGEF28-206ENST00000504003 NLRP6P59044 892 aa12.55□□□□□ -0.4
ARHGEF28-206ENST00000504003 NGDNQ8NEJ9 315 aaKnown RBP12.55□□□□□ -0.4
ARHGEF28-206ENST00000504003 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
ARHGEF28-206ENST00000504003 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
ARHGEF28-206ENST00000504003 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
ARHGEF28-206ENST00000504003 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
ARHGEF28-206ENST00000504003 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
ARHGEF28-206ENST00000504003 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF28-206ENST00000504003 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
ARHGEF28-206ENST00000504003 ESCO1Q5FWF5 840 aa12.53□□□□□ -0.4
ARHGEF28-206ENST00000504003 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
ARHGEF28-206ENST00000504003 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.4
ARHGEF28-206ENST00000504003 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
ARHGEF28-206ENST00000504003 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
ARHGEF28-206ENST00000504003 ERBB3P21860 1342 aa12.52□□□□□ -0.41
ARHGEF28-206ENST00000504003 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
ARHGEF28-206ENST00000504003 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
ARHGEF28-206ENST00000504003 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF28-206ENST00000504003 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF28-206ENST00000504003 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF28-206ENST00000504003 RALBP1Q15311 655 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 ACEP12821 1306 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 A0A1W2PP64 1363 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 NSD2O96028 1365 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 LTBP4Q8N2S1 1624 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
ARHGEF28-206ENST00000504003 AKAP12Q02952 1782 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 STK25O00506 426 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 PSME1Q06323 249 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 PMFBP1Q8TBY8 1022 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
ARHGEF28-206ENST00000504003 MST1RQ04912 1400 aa12.48□□□□□ -0.41
ARHGEF28-206ENST00000504003 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
ARHGEF28-206ENST00000504003 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF28-206ENST00000504003 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
ARHGEF28-206ENST00000504003 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
ARHGEF28-206ENST00000504003 TTC21AQ8NDW8 1320 aa12.47□□□□□ -0.41
ARHGEF28-206ENST00000504003 TOM1O60784 492 aa12.47□□□□□ -0.41
ARHGEF28-206ENST00000504003 TMEM92Q6UXU6 159 aa12.47□□□□□ -0.41
ARHGEF28-206ENST00000504003 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
ARHGEF28-206ENST00000504003 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.41
ARHGEF28-206ENST00000504003 CC2D1BQ5T0F9 858 aaKnown RBP12.46□□□□□ -0.41
ARHGEF28-206ENST00000504003 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.42
ARHGEF28-206ENST00000504003 USP6P35125 1406 aa12.45□□□□□ -0.42
ARHGEF28-206ENST00000504003 MORC1Q86VD1 984 aa12.45□□□□□ -0.42
ARHGEF28-206ENST00000504003 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
ARHGEF28-206ENST00000504003 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF28-206ENST00000504003 KIF20BQ96Q89 1820 aa12.45□□□□□ -0.42
ARHGEF28-206ENST00000504003 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 COG3Q96JB2 828 aa12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
ARHGEF28-206ENST00000504003 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
ARHGEF28-206ENST00000504003 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
ARHGEF28-206ENST00000504003 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
ARHGEF28-206ENST00000504003 FOXO3O43524 673 aa12.42□□□□□ -0.42
ARHGEF28-206ENST00000504003 KRT28Q7Z3Y7 464 aa12.42□□□□□ -0.42
ARHGEF28-206ENST00000504003 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
ARHGEF28-206ENST00000504003 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
ARHGEF28-206ENST00000504003 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
ARHGEF28-206ENST00000504003 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
ARHGEF28-206ENST00000504003 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
ARHGEF28-206ENST00000504003 FYB1O15117 783 aa12.4□□□□□ -0.42
ARHGEF28-206ENST00000504003 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
ARHGEF28-206ENST00000504003 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
ARHGEF28-206ENST00000504003 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
ARHGEF28-206ENST00000504003 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
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