RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
PRDM2-213ENST00000503842 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
PRDM2-213ENST00000503842 NFAT5O94916 1531 aa17.98■□□□□ 0.47
PRDM2-213ENST00000503842 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
PRDM2-213ENST00000503842 MAP2P11137 1827 aaKnown RBP17.96■□□□□ 0.47
PRDM2-213ENST00000503842 FBLN1P23142 703 aa17.96■□□□□ 0.47
PRDM2-213ENST00000503842 MTHFSP49914 203 aa17.96■□□□□ 0.47
PRDM2-213ENST00000503842 MRS2Q9HD23 443 aa17.96■□□□□ 0.47
PRDM2-213ENST00000503842 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
PRDM2-213ENST00000503842 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
PRDM2-213ENST00000503842 LRRC59Q96AG4 307 aaKnown RBP17.95■□□□□ 0.46
PRDM2-213ENST00000503842 CHRDL2Q6WN34 429 aa17.94■□□□□ 0.46
PRDM2-213ENST00000503842 KCNH5Q8NCM2 988 aa17.94■□□□□ 0.46
PRDM2-213ENST00000503842 INSRP06213 1382 aa17.93■□□□□ 0.46
PRDM2-213ENST00000503842 PNPLA6Q8IY17 1366 aa17.93■□□□□ 0.46
PRDM2-213ENST00000503842 GCP02774 474 aa17.93■□□□□ 0.46
PRDM2-213ENST00000503842 RRS1Q15050 365 aaKnown RBP17.93■□□□□ 0.46
PRDM2-213ENST00000503842 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
PRDM2-213ENST00000503842 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
PRDM2-213ENST00000503842 CDK12Q9NYV4 1490 aaPredicted RBP17.93■□□□□ 0.46
PRDM2-213ENST00000503842 SOX12O15370 315 aa17.92■□□□□ 0.46
PRDM2-213ENST00000503842 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
PRDM2-213ENST00000503842 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
PRDM2-213ENST00000503842 COL22A1Q8NFW1 1626 aaPredicted RBP17.91■□□□□ 0.46
PRDM2-213ENST00000503842 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
PRDM2-213ENST00000503842 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
PRDM2-213ENST00000503842 ABCA3Q99758 1704 aa17.9■□□□□ 0.46
PRDM2-213ENST00000503842 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
PRDM2-213ENST00000503842 ARHGEF25Q86VW2 580 aa17.89■□□□□ 0.45
PRDM2-213ENST00000503842 PLCD3Q8N3E9 789 aa17.89■□□□□ 0.45
PRDM2-213ENST00000503842 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
PRDM2-213ENST00000503842 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.45
PRDM2-213ENST00000503842 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
PRDM2-213ENST00000503842 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
PRDM2-213ENST00000503842 LTN1O94822 1766 aa17.88■□□□□ 0.45
PRDM2-213ENST00000503842 FLT4P35916 1363 aa17.88■□□□□ 0.45
PRDM2-213ENST00000503842 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
PRDM2-213ENST00000503842 CPDO75976 1380 aa17.87■□□□□ 0.45
PRDM2-213ENST00000503842 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
PRDM2-213ENST00000503842 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
PRDM2-213ENST00000503842 HOXC9P31274 260 aa17.85■□□□□ 0.45
PRDM2-213ENST00000503842 AMPHP49418 695 aa17.85■□□□□ 0.45
PRDM2-213ENST00000503842 ABCC6O95255 1503 aa17.84■□□□□ 0.45
PRDM2-213ENST00000503842 IP6K1Q92551 441 aa17.84■□□□□ 0.45
PRDM2-213ENST00000503842 JCADQ9P266 1359 aa17.83■□□□□ 0.45
PRDM2-213ENST00000503842 DIAPH1O60610 1272 aaKnown RBP17.83■□□□□ 0.44
PRDM2-213ENST00000503842 HSPA1LP34931 641 aa17.83■□□□□ 0.44
PRDM2-213ENST00000503842 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
PRDM2-213ENST00000503842 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
PRDM2-213ENST00000503842 COL18A1P39060 1754 aa17.83■□□□□ 0.44
PRDM2-213ENST00000503842 KIAA0232Q92628 1395 aa17.82■□□□□ 0.44
PRDM2-213ENST00000503842 IL13P35225 146 aa17.82■□□□□ 0.44
PRDM2-213ENST00000503842 FAM9BQ8IZU0 186 aa17.81■□□□□ 0.44
PRDM2-213ENST00000503842 HAP1P54257 671 aaPredicted RBP17.8■□□□□ 0.44
PRDM2-213ENST00000503842 EIF4A2Q14240 407 aaKnown RBP17.8■□□□□ 0.44
PRDM2-213ENST00000503842 WDR43Q15061 677 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRDM2-213ENST00000503842 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
PRDM2-213ENST00000503842 ZBTB7CA1YPR0 619 aa17.79■□□□□ 0.44
PRDM2-213ENST00000503842 NUDCQ9Y266 331 aa17.79■□□□□ 0.44
PRDM2-213ENST00000503842 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
PRDM2-213ENST00000503842 PRDM11Q9NQV5 511 aa17.78■□□□□ 0.44
PRDM2-213ENST00000503842 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
PRDM2-213ENST00000503842 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
PRDM2-213ENST00000503842 CHRNA2Q15822 529 aa17.77■□□□□ 0.44
PRDM2-213ENST00000503842 RGPD1P0DJD0 1748 aa17.77■□□□□ 0.44
PRDM2-213ENST00000503842 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
PRDM2-213ENST00000503842 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
PRDM2-213ENST00000503842 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
PRDM2-213ENST00000503842 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
PRDM2-213ENST00000503842 SPATA31A6Q5VVP1 1343 aa17.74■□□□□ 0.43
PRDM2-213ENST00000503842 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
PRDM2-213ENST00000503842 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
PRDM2-213ENST00000503842 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
PRDM2-213ENST00000503842 ERBB3P21860 1342 aa17.73■□□□□ 0.43
PRDM2-213ENST00000503842 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
PRDM2-213ENST00000503842 ANKRD24Q8TF21 1146 aa17.73■□□□□ 0.43
PRDM2-213ENST00000503842 LTV1Q96GA3 475 aaPredicted RBP17.73■□□□□ 0.43
PRDM2-213ENST00000503842 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
PRDM2-213ENST00000503842 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
PRDM2-213ENST00000503842 EYA1Q99502 592 aa17.72■□□□□ 0.43
PRDM2-213ENST00000503842 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
PRDM2-213ENST00000503842 COL5A2P05997 1499 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-213ENST00000503842 NUTM2BA6NNL0 878 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-213ENST00000503842 NUTM2EB1AL46 878 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-213ENST00000503842 NUTM2AQ8IVF1 878 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-213ENST00000503842 KDRP35968 1356 aa17.7■□□□□ 0.42
PRDM2-213ENST00000503842 LRP6O75581 1613 aa17.7■□□□□ 0.42
PRDM2-213ENST00000503842 FCHSD2O94868 740 aa17.7■□□□□ 0.42
PRDM2-213ENST00000503842 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
PRDM2-213ENST00000503842 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
PRDM2-213ENST00000503842 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
PRDM2-213ENST00000503842 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
PRDM2-213ENST00000503842 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
PRDM2-213ENST00000503842 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
PRDM2-213ENST00000503842 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
PRDM2-213ENST00000503842 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
PRDM2-213ENST00000503842 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
PRDM2-213ENST00000503842 HMOX1P09601 288 aa17.68■□□□□ 0.42
PRDM2-213ENST00000503842 FXR2P51116 673 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRDM2-213ENST00000503842 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms