RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 RTN4Q9NQC3 1192 aaKnown RBP23.82■■□□□ 1.4
LPCAT1-203ENST00000503252 IL27Q8NEV9 243 aa23.81■■□□□ 1.4
LPCAT1-203ENST00000503252 ACEP12821 1306 aa23.81■■□□□ 1.4
LPCAT1-203ENST00000503252 ATF7IPQ6VMQ6 1270 aa23.81■■□□□ 1.4
LPCAT1-203ENST00000503252 EID1Q9Y6B2 187 aa23.81■■□□□ 1.4
LPCAT1-203ENST00000503252 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
LPCAT1-203ENST00000503252 RWDD1Q9H446 243 aaPredicted RBP23.78■■□□□ 1.4
LPCAT1-203ENST00000503252 DDRGK1Q96HY6 314 aa23.78■■□□□ 1.4
LPCAT1-203ENST00000503252 ITPRIPQ8IWB1 547 aa23.77■■□□□ 1.4
LPCAT1-203ENST00000503252 PLEKHG3A1L390 1219 aa23.77■■□□□ 1.39
LPCAT1-203ENST00000503252 PDZRN3Q9UPQ7 1066 aa23.77■■□□□ 1.39
LPCAT1-203ENST00000503252 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.39
LPCAT1-203ENST00000503252 TOPAZ1Q8N9V7 1692 aa23.76■■□□□ 1.39
LPCAT1-203ENST00000503252 TMEM57Q8N5G2 664 aa23.75■■□□□ 1.39
LPCAT1-203ENST00000503252 NRKQ7Z2Y5 1582 aa23.75■■□□□ 1.39
LPCAT1-203ENST00000503252 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
LPCAT1-203ENST00000503252 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
LPCAT1-203ENST00000503252 KIF16BQ96L93 1317 aa23.74■■□□□ 1.39
LPCAT1-203ENST00000503252 SLIT1O75093 1534 aa23.74■■□□□ 1.39
LPCAT1-203ENST00000503252 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
LPCAT1-203ENST00000503252 USP6P35125 1406 aa23.73■■□□□ 1.39
LPCAT1-203ENST00000503252 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 IPO8O15397 1037 aaKnown RBP23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 TSPYL6Q8N831 410 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 IFT57Q9NWB7 429 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 PODXL2Q9NZ53 605 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 TBX22Q9Y458 520 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 OVOS2A0A0J9YW53 1432 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 OVOS2Q6IE36 1432 aa23.72■■□□□ 1.39
LPCAT1-203ENST00000503252 FAM83GA6ND36 823 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 VAMP4O75379 141 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 ZNF853P0CG23 659 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 SLC4A3P48751 1232 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 GNAI1P63096 354 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 AEBP1Q8IUX7 1158 aa23.71■■□□□ 1.39
LPCAT1-203ENST00000503252 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
LPCAT1-203ENST00000503252 DLG5Q8TDM6 1919 aa23.7■■□□□ 1.38
LPCAT1-203ENST00000503252 VIRMAQ69YN4 1812 aaKnown RBP23.7■■□□□ 1.38
LPCAT1-203ENST00000503252 SEC24BO95487 1268 aa23.69■■□□□ 1.38
LPCAT1-203ENST00000503252 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 DCTN1Q14203 1278 aa23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 THEMISQ8N1K5 641 aaPredicted RBP23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 SOX12O15370 315 aa23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 SULT6B1Q6IMI4 303 aa23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
LPCAT1-203ENST00000503252 LMOD3Q0VAK6 560 aa23.67■■□□□ 1.38
LPCAT1-203ENST00000503252 ZBTB40Q9NUA8 1239 aa23.67■■□□□ 1.38
LPCAT1-203ENST00000503252 BRPF1P55201 1214 aaPredicted RBP23.67■■□□□ 1.38
LPCAT1-203ENST00000503252 HDAC1Q13547 482 aaPredicted RBP23.67■■□□□ 1.38
LPCAT1-203ENST00000503252 HSP90AB2PQ58FF8 381 aa23.67■■□□□ 1.38
LPCAT1-203ENST00000503252 USP19O94966 1318 aa23.66■■□□□ 1.38
LPCAT1-203ENST00000503252 SSH2Q76I76 1423 aa23.66■■□□□ 1.38
LPCAT1-203ENST00000503252 CFAP44Q96MT7 982 aa23.66■■□□□ 1.38
LPCAT1-203ENST00000503252 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
LPCAT1-203ENST00000503252 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
LPCAT1-203ENST00000503252 PEAK1Q9H792 1746 aa23.64■■□□□ 1.38
LPCAT1-203ENST00000503252 USP31Q70CQ4 1352 aa23.64■■□□□ 1.38
LPCAT1-203ENST00000503252 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.37
LPCAT1-203ENST00000503252 NALCNQ8IZF0 1738 aa23.63■■□□□ 1.37
LPCAT1-203ENST00000503252 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
LPCAT1-203ENST00000503252 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
LPCAT1-203ENST00000503252 NGDNQ8NEJ9 315 aaKnown RBP23.61■■□□□ 1.37
LPCAT1-203ENST00000503252 RGPD8O14715 1765 aaPredicted RBP23.61■■□□□ 1.37
LPCAT1-203ENST00000503252 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
LPCAT1-203ENST00000503252 RTL5Q5HYW3 569 aaPredicted RBP23.61■■□□□ 1.37
LPCAT1-203ENST00000503252 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
LPCAT1-203ENST00000503252 SMC5Q8IY18 1101 aa23.59■■□□□ 1.37
LPCAT1-203ENST00000503252 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
LPCAT1-203ENST00000503252 KCNA6P17658 529 aa23.58■■□□□ 1.37
LPCAT1-203ENST00000503252 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.37
LPCAT1-203ENST00000503252 MCM10Q7L590 875 aa23.56■■□□□ 1.36
LPCAT1-203ENST00000503252 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
LPCAT1-203ENST00000503252 ZBTB7BO15156 539 aaPredicted RBP23.56■■□□□ 1.36
LPCAT1-203ENST00000503252 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
LPCAT1-203ENST00000503252 PIK3R4Q99570 1358 aa23.55■■□□□ 1.36
LPCAT1-203ENST00000503252 ABCC4O15439 1325 aa23.53■■□□□ 1.36
LPCAT1-203ENST00000503252 KRT24Q2M2I5 525 aa23.53■■□□□ 1.36
LPCAT1-203ENST00000503252 C1orf115Q9H7X2 142 aa23.53■■□□□ 1.36
LPCAT1-203ENST00000503252 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
LPCAT1-203ENST00000503252 CHL1O00533 1208 aa23.51■■□□□ 1.35
LPCAT1-203ENST00000503252 FLT4P35916 1363 aa23.51■■□□□ 1.35
LPCAT1-203ENST00000503252 PIK3C2AO00443 1686 aa23.51■■□□□ 1.35
LPCAT1-203ENST00000503252 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
LPCAT1-203ENST00000503252 ARHGEF10O15013 1369 aa23.5■■□□□ 1.35
LPCAT1-203ENST00000503252 AMPHP49418 695 aa23.5■■□□□ 1.35
LPCAT1-203ENST00000503252 NUCB1Q02818 461 aa23.5■■□□□ 1.35
LPCAT1-203ENST00000503252 FOXO3O43524 673 aa23.49■■□□□ 1.35
LPCAT1-203ENST00000503252 NLRP6P59044 892 aa23.49■■□□□ 1.35
LPCAT1-203ENST00000503252 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
LPCAT1-203ENST00000503252 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
LPCAT1-203ENST00000503252 UPF2Q9HAU5 1272 aaKnown RBP23.48■■□□□ 1.35
LPCAT1-203ENST00000503252 ANKARQ7Z5J8 1434 aa23.48■■□□□ 1.35
LPCAT1-203ENST00000503252 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
LPCAT1-203ENST00000503252 LNPKQ9C0E8 428 aa23.48■■□□□ 1.35
LPCAT1-203ENST00000503252 MTHFSDQ2M296 383 aaKnown RBP23.47■■□□□ 1.35
LPCAT1-203ENST00000503252 TBC1D32Q96NH3 1257 aa23.47■■□□□ 1.35
LPCAT1-203ENST00000503252 EYA1Q99502 592 aa23.47■■□□□ 1.35
LPCAT1-203ENST00000503252 CHMP4BQ9H444 224 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms