RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
CLDND1-206ENST00000502299 LMO7Q8WWI1 1683 aa20.03■□□□□ 0.8
CLDND1-206ENST00000502299 GCP02774 474 aa20.02■□□□□ 0.8
CLDND1-206ENST00000502299 AKAP12Q02952 1782 aa20.02■□□□□ 0.8
CLDND1-206ENST00000502299 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
CLDND1-206ENST00000502299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
CLDND1-206ENST00000502299 COL5A2P05997 1499 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-206ENST00000502299 A0A1W2PP64 1363 aa19.99■□□□□ 0.79
CLDND1-206ENST00000502299 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
CLDND1-206ENST00000502299 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
CLDND1-206ENST00000502299 KCNH5Q8NCM2 988 aa19.97■□□□□ 0.79
CLDND1-206ENST00000502299 RREB1Q92766 1687 aa19.97■□□□□ 0.79
CLDND1-206ENST00000502299 ANKRD36BQ8N2N9 1353 aa19.96■□□□□ 0.79
CLDND1-206ENST00000502299 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
CLDND1-206ENST00000502299 NBPF14Q5TI25 921 aa19.95■□□□□ 0.78
CLDND1-206ENST00000502299 NUP188Q5SRE5 1749 aa19.95■□□□□ 0.78
CLDND1-206ENST00000502299 CRB1P82279 1406 aa19.94■□□□□ 0.78
CLDND1-206ENST00000502299 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
CLDND1-206ENST00000502299 NME9Q86XW9 330 aa19.94■□□□□ 0.78
CLDND1-206ENST00000502299 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
CLDND1-206ENST00000502299 USP31Q70CQ4 1352 aa19.94■□□□□ 0.78
CLDND1-206ENST00000502299 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
CLDND1-206ENST00000502299 AATKQ6ZMQ8 1374 aa19.93■□□□□ 0.78
CLDND1-206ENST00000502299 PARP4Q9UKK3 1724 aaKnown RBP19.92■□□□□ 0.78
CLDND1-206ENST00000502299 SLIT3O75094 1523 aa19.92■□□□□ 0.78
CLDND1-206ENST00000502299 PTF1AQ7RTS3 328 aa19.91■□□□□ 0.78
CLDND1-206ENST00000502299 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
CLDND1-206ENST00000502299 OVOS2A0A0G2JMS6 1433 aa19.9■□□□□ 0.78
CLDND1-206ENST00000502299 OVOS2A0A0J9YW53 1432 aa19.9■□□□□ 0.78
CLDND1-206ENST00000502299 OVOS2Q6IE36 1432 aa19.9■□□□□ 0.78
CLDND1-206ENST00000502299 PEAK1Q9H792 1746 aa19.9■□□□□ 0.78
CLDND1-206ENST00000502299 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
CLDND1-206ENST00000502299 SOX12O15370 315 aa19.88■□□□□ 0.77
CLDND1-206ENST00000502299 DDB1Q16531 1140 aa19.88■□□□□ 0.77
CLDND1-206ENST00000502299 TOM1L2Q6ZVM7 507 aa19.88■□□□□ 0.77
CLDND1-206ENST00000502299 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
CLDND1-206ENST00000502299 COG3Q96JB2 828 aa19.88■□□□□ 0.77
CLDND1-206ENST00000502299 PLSCR1O15162 318 aa19.87■□□□□ 0.77
CLDND1-206ENST00000502299 KCNQ2O43526 872 aa19.87■□□□□ 0.77
CLDND1-206ENST00000502299 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
CLDND1-206ENST00000502299 SPON1Q9HCB6 807 aa19.87■□□□□ 0.77
CLDND1-206ENST00000502299 LRRC37A3O60309 1634 aa19.87■□□□□ 0.77
CLDND1-206ENST00000502299 FYB1O15117 783 aa19.86■□□□□ 0.77
CLDND1-206ENST00000502299 MARCH10Q8NA82 808 aaPredicted RBP19.86■□□□□ 0.77
CLDND1-206ENST00000502299 WDR17Q8IZU2 1322 aa19.85■□□□□ 0.77
CLDND1-206ENST00000502299 PROM2Q8N271 834 aa19.85■□□□□ 0.77
CLDND1-206ENST00000502299 BCL11BQ9C0K0 894 aaPredicted RBP19.85■□□□□ 0.77
CLDND1-206ENST00000502299 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
CLDND1-206ENST00000502299 COL18A1P39060 1754 aa19.85■□□□□ 0.77
CLDND1-206ENST00000502299 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.77
CLDND1-206ENST00000502299 PPP1R1BQ9UD71 204 aaPredicted RBP19.83■□□□□ 0.77
CLDND1-206ENST00000502299 MYOM1P52179 1685 aa19.83■□□□□ 0.76
CLDND1-206ENST00000502299 USP54Q70EL1 1684 aa19.83■□□□□ 0.76
CLDND1-206ENST00000502299 YY1P25490 414 aa19.82■□□□□ 0.76
CLDND1-206ENST00000502299 PDGFDQ9GZP0 370 aaPredicted RBP19.82■□□□□ 0.76
CLDND1-206ENST00000502299 PANK3Q9H999 370 aa19.82■□□□□ 0.76
CLDND1-206ENST00000502299 NSD3Q9BZ95 1437 aa19.81■□□□□ 0.76
CLDND1-206ENST00000502299 KIF7Q2M1P5 1343 aa19.8■□□□□ 0.76
CLDND1-206ENST00000502299 BCL9O00512 1426 aa19.8■□□□□ 0.76
CLDND1-206ENST00000502299 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
CLDND1-206ENST00000502299 NFAT5O94916 1531 aa19.8■□□□□ 0.76
CLDND1-206ENST00000502299 CGNL1Q0VF96 1302 aa19.79■□□□□ 0.76
CLDND1-206ENST00000502299 CARD10Q9BWT7 1032 aa19.79■□□□□ 0.76
CLDND1-206ENST00000502299 RGPD3A6NKT7 1758 aaPredicted RBP19.79■□□□□ 0.76
CLDND1-206ENST00000502299 RGPD4Q7Z3J3 1758 aa19.79■□□□□ 0.76
CLDND1-206ENST00000502299 SBF2Q86WG5 1849 aa19.79■□□□□ 0.76
CLDND1-206ENST00000502299 CSB-PGBD3P0DP91 1061 aa19.77■□□□□ 0.76
CLDND1-206ENST00000502299 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
CLDND1-206ENST00000502299 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
CLDND1-206ENST00000502299 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
CLDND1-206ENST00000502299 TXNRD1Q16881 649 aa19.75■□□□□ 0.75
CLDND1-206ENST00000502299 EXOC5O00471 708 aa19.74■□□□□ 0.75
CLDND1-206ENST00000502299 FBLN1P23142 703 aa19.74■□□□□ 0.75
CLDND1-206ENST00000502299 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
CLDND1-206ENST00000502299 PTGER2P43116 358 aa19.74■□□□□ 0.75
CLDND1-206ENST00000502299 IP6K1Q92551 441 aa19.74■□□□□ 0.75
CLDND1-206ENST00000502299 ABCC6O95255 1503 aa19.74■□□□□ 0.75
CLDND1-206ENST00000502299 AMPHP49418 695 aa19.73■□□□□ 0.75
CLDND1-206ENST00000502299 KNSTRNQ9Y448 316 aa19.73■□□□□ 0.75
CLDND1-206ENST00000502299 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
CLDND1-206ENST00000502299 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
CLDND1-206ENST00000502299 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
CLDND1-206ENST00000502299 KIF20BQ96Q89 1820 aa19.72■□□□□ 0.75
CLDND1-206ENST00000502299 RGPD5Q99666 1765 aa19.71■□□□□ 0.75
CLDND1-206ENST00000502299 SLC15A2Q16348 729 aa19.71■□□□□ 0.75
CLDND1-206ENST00000502299 ATF5Q9Y2D1 282 aaPredicted RBP19.71■□□□□ 0.75
CLDND1-206ENST00000502299 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 HOXC9P31274 260 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 RRS1Q15050 365 aaKnown RBP19.7■□□□□ 0.74
CLDND1-206ENST00000502299 ANKRD24Q8TF21 1146 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 STK32BQ9NY57 414 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 UTRNP46939 3433 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 LTN1O94822 1766 aa19.7■□□□□ 0.74
CLDND1-206ENST00000502299 ERBB3P21860 1342 aa19.69■□□□□ 0.74
CLDND1-206ENST00000502299 TNS2Q63HR2 1409 aa19.68■□□□□ 0.74
CLDND1-206ENST00000502299 NSD2O96028 1365 aa19.68■□□□□ 0.74
CLDND1-206ENST00000502299 ACSBG1Q96GR2 724 aa19.67■□□□□ 0.74
CLDND1-206ENST00000502299 NLRP2Q9NX02 1062 aa19.67■□□□□ 0.74
CLDND1-206ENST00000502299 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
CLDND1-206ENST00000502299 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms