RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
CCDC58-207ENST00000498466 WDR17Q8IZU2 1322 aa20.16■□□□□ 0.82
CCDC58-207ENST00000498466 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
CCDC58-207ENST00000498466 MARCH10Q8NA82 808 aaPredicted RBP20.15■□□□□ 0.82
CCDC58-207ENST00000498466 CDCA7Q9BWT1 371 aaPredicted RBP20.15■□□□□ 0.82
CCDC58-207ENST00000498466 PDGFDQ9GZP0 370 aaPredicted RBP20.15■□□□□ 0.82
CCDC58-207ENST00000498466 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
CCDC58-207ENST00000498466 UTRNP46939 3433 aa20.14■□□□□ 0.82
CCDC58-207ENST00000498466 PROM2Q8N271 834 aa20.14■□□□□ 0.81
CCDC58-207ENST00000498466 CSB-PGBD3P0DP91 1061 aa20.13■□□□□ 0.81
CCDC58-207ENST00000498466 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
CCDC58-207ENST00000498466 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
CCDC58-207ENST00000498466 SOX12O15370 315 aa20.12■□□□□ 0.81
CCDC58-207ENST00000498466 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
CCDC58-207ENST00000498466 QRICH2Q9H0J4 1663 aa20.12■□□□□ 0.81
CCDC58-207ENST00000498466 BCL9O00512 1426 aa20.11■□□□□ 0.81
CCDC58-207ENST00000498466 STK32BQ9NY57 414 aa20.11■□□□□ 0.81
CCDC58-207ENST00000498466 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
CCDC58-207ENST00000498466 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 TXNRD1Q16881 649 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 COL18A1P39060 1754 aa20.1■□□□□ 0.81
CCDC58-207ENST00000498466 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
CCDC58-207ENST00000498466 EXOC5O00471 708 aa20.09■□□□□ 0.81
CCDC58-207ENST00000498466 PTGER2P43116 358 aa20.09■□□□□ 0.81
CCDC58-207ENST00000498466 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
CCDC58-207ENST00000498466 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.8
CCDC58-207ENST00000498466 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
CCDC58-207ENST00000498466 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
CCDC58-207ENST00000498466 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
CCDC58-207ENST00000498466 MYOM1P52179 1685 aa20.07■□□□□ 0.8
CCDC58-207ENST00000498466 FHDC1Q9C0D6 1143 aaPredicted RBP20.05■□□□□ 0.8
CCDC58-207ENST00000498466 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
CCDC58-207ENST00000498466 MTFR1LQ9H019 292 aa20.04■□□□□ 0.8
CCDC58-207ENST00000498466 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
CCDC58-207ENST00000498466 TTC21AQ8NDW8 1320 aa20.03■□□□□ 0.8
CCDC58-207ENST00000498466 ZNF784Q8NCA9 323 aaPredicted RBP20.03■□□□□ 0.8
CCDC58-207ENST00000498466 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
CCDC58-207ENST00000498466 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.79
CCDC58-207ENST00000498466 TNS2Q63HR2 1409 aa20.02■□□□□ 0.79
CCDC58-207ENST00000498466 ACSBG1Q96GR2 724 aa20.01■□□□□ 0.79
CCDC58-207ENST00000498466 RGPD5Q99666 1765 aa20■□□□□ 0.79
CCDC58-207ENST00000498466 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
CCDC58-207ENST00000498466 NFAT5O94916 1531 aa20■□□□□ 0.79
CCDC58-207ENST00000498466 KTN1Q86UP2 1357 aaKnown RBP19.99■□□□□ 0.79
CCDC58-207ENST00000498466 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
CCDC58-207ENST00000498466 ARXQ96QS3 562 aa19.97■□□□□ 0.79
CCDC58-207ENST00000498466 NLRP2Q9NX02 1062 aa19.97■□□□□ 0.79
CCDC58-207ENST00000498466 ABCC6O95255 1503 aa19.97■□□□□ 0.79
CCDC58-207ENST00000498466 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
CCDC58-207ENST00000498466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC58-207ENST00000498466 NHSQ6T4R5 1651 aa19.96■□□□□ 0.79
CCDC58-207ENST00000498466 ERBB3P21860 1342 aa19.95■□□□□ 0.78
CCDC58-207ENST00000498466 IL2RBP14784 551 aa19.94■□□□□ 0.78
CCDC58-207ENST00000498466 ZNF827Q17R98 1081 aa19.92■□□□□ 0.78
CCDC58-207ENST00000498466 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
CCDC58-207ENST00000498466 NME9Q86XW9 330 aa19.91■□□□□ 0.78
CCDC58-207ENST00000498466 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
CCDC58-207ENST00000498466 USP31Q70CQ4 1352 aa19.91■□□□□ 0.78
CCDC58-207ENST00000498466 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
CCDC58-207ENST00000498466 GOLGB1Q14789 3259 aaKnown RBP19.9■□□□□ 0.78
CCDC58-207ENST00000498466 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
CCDC58-207ENST00000498466 ADRA2BP18089 450 aa19.89■□□□□ 0.77
CCDC58-207ENST00000498466 GPR162Q16538 588 aa19.89■□□□□ 0.77
CCDC58-207ENST00000498466 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
CCDC58-207ENST00000498466 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
CCDC58-207ENST00000498466 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
CCDC58-207ENST00000498466 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
CCDC58-207ENST00000498466 KLHL34Q8N239 644 aa19.88■□□□□ 0.77
CCDC58-207ENST00000498466 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
CCDC58-207ENST00000498466 MON2Q7Z3U7 1717 aa19.88■□□□□ 0.77
CCDC58-207ENST00000498466 BTAF1O14981 1849 aa19.87■□□□□ 0.77
CCDC58-207ENST00000498466 SBNO2Q9Y2G9 1366 aa19.86■□□□□ 0.77
CCDC58-207ENST00000498466 POLD1P28340 1107 aa19.86■□□□□ 0.77
CCDC58-207ENST00000498466 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
CCDC58-207ENST00000498466 DDX54Q8TDD1 881 aaKnown RBP19.85■□□□□ 0.77
CCDC58-207ENST00000498466 SLC16A10Q8TF71 515 aa19.85■□□□□ 0.77
CCDC58-207ENST00000498466 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
CCDC58-207ENST00000498466 CHD4Q14839 1912 aa19.84■□□□□ 0.77
CCDC58-207ENST00000498466 SLC27A3Q5K4L6 730 aa19.84■□□□□ 0.77
CCDC58-207ENST00000498466 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
CCDC58-207ENST00000498466 LTN1O94822 1766 aa19.84■□□□□ 0.77
CCDC58-207ENST00000498466 CD163L1Q9NR16 1453 aa19.84■□□□□ 0.77
CCDC58-207ENST00000498466 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
CCDC58-207ENST00000498466 SYTL4Q96C24 671 aaPredicted RBP19.82■□□□□ 0.76
CCDC58-207ENST00000498466 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
CCDC58-207ENST00000498466 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
CCDC58-207ENST00000498466 TFCP2L1Q9NZI6 479 aa19.82■□□□□ 0.76
CCDC58-207ENST00000498466 PNPLA7Q6ZV29 1317 aa19.81■□□□□ 0.76
CCDC58-207ENST00000498466 EDC4Q6P2E9 1401 aaKnown RBP19.81■□□□□ 0.76
CCDC58-207ENST00000498466 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
CCDC58-207ENST00000498466 GIGYF1O75420 1035 aaPredicted RBP19.79■□□□□ 0.76
CCDC58-207ENST00000498466 KCNQ4P56696 695 aa19.79■□□□□ 0.76
CCDC58-207ENST00000498466 IP6K1Q92551 441 aa19.79■□□□□ 0.76
CCDC58-207ENST00000498466 CARD11Q9BXL7 1154 aa19.79■□□□□ 0.76
CCDC58-207ENST00000498466 PRIM1P49642 420 aaKnown RBP19.78■□□□□ 0.76
CCDC58-207ENST00000498466 KAT6BQ8WYB5 2073 aa19.77■□□□□ 0.76
CCDC58-207ENST00000498466 NLGN2Q8NFZ4 835 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms