RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TTC21AQ8NDW8 1320 aa26.45■■□□□ 1.83
PRKCB-209ENST00000498058 CD163L1Q9NR16 1453 aa26.45■■□□□ 1.82
PRKCB-209ENST00000498058 TOM1L2Q6ZVM7 507 aa26.45■■□□□ 1.82
PRKCB-209ENST00000498058 KTN1Q86UP2 1357 aaKnown RBP26.45■■□□□ 1.82
PRKCB-209ENST00000498058 SBF2Q86WG5 1849 aa26.44■■□□□ 1.82
PRKCB-209ENST00000498058 WDR17Q8IZU2 1322 aa26.44■■□□□ 1.82
PRKCB-209ENST00000498058 CARD11Q9BXL7 1154 aa26.44■■□□□ 1.82
PRKCB-209ENST00000498058 PARD3Q8TEW0 1356 aa26.43■■□□□ 1.82
PRKCB-209ENST00000498058 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
PRKCB-209ENST00000498058 PTF1AQ7RTS3 328 aa26.41■■□□□ 1.82
PRKCB-209ENST00000498058 KCNH5Q8NCM2 988 aa26.41■■□□□ 1.82
PRKCB-209ENST00000498058 DDB1Q16531 1140 aa26.39■■□□□ 1.82
PRKCB-209ENST00000498058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.39■■□□□ 1.82
PRKCB-209ENST00000498058 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.81
PRKCB-209ENST00000498058 OVOS2A0A0J9YW53 1432 aa26.39■■□□□ 1.81
PRKCB-209ENST00000498058 OVOS2Q6IE36 1432 aa26.39■■□□□ 1.81
PRKCB-209ENST00000498058 NME9Q86XW9 330 aa26.38■■□□□ 1.81
PRKCB-209ENST00000498058 USP54Q70EL1 1684 aa26.38■■□□□ 1.81
PRKCB-209ENST00000498058 USP31Q70CQ4 1352 aa26.37■■□□□ 1.81
PRKCB-209ENST00000498058 MARCH10Q8NA82 808 aaPredicted RBP26.37■■□□□ 1.81
PRKCB-209ENST00000498058 SLC12A5Q9H2X9 1139 aa26.37■■□□□ 1.81
PRKCB-209ENST00000498058 TONSLQ96HA7 1378 aa26.35■■□□□ 1.81
PRKCB-209ENST00000498058 CARD10Q9BWT7 1032 aa26.35■■□□□ 1.81
PRKCB-209ENST00000498058 TMC1Q8TDI8 760 aa26.34■■□□□ 1.81
PRKCB-209ENST00000498058 CSB-PGBD3P0DP91 1061 aa26.33■■□□□ 1.81
PRKCB-209ENST00000498058 LTN1O94822 1766 aa26.31■■□□□ 1.8
PRKCB-209ENST00000498058 ABCC6O95255 1503 aa26.31■■□□□ 1.8
PRKCB-209ENST00000498058 C11orf95C9JLR9 678 aaPredicted RBP26.3■■□□□ 1.8
PRKCB-209ENST00000498058 A0A1W2PP64 1363 aa26.3■■□□□ 1.8
PRKCB-209ENST00000498058 RGPD3A6NKT7 1758 aaPredicted RBP26.3■■□□□ 1.8
PRKCB-209ENST00000498058 RGPD4Q7Z3J3 1758 aa26.3■■□□□ 1.8
PRKCB-209ENST00000498058 TESK2Q96S53 571 aa26.29■■□□□ 1.8
PRKCB-209ENST00000498058 CDCA7Q9BWT1 371 aaPredicted RBP26.29■■□□□ 1.8
PRKCB-209ENST00000498058 PLSCR1O15162 318 aa26.28■■□□□ 1.8
PRKCB-209ENST00000498058 BCL11BQ9C0K0 894 aaPredicted RBP26.28■■□□□ 1.8
PRKCB-209ENST00000498058 BCL9O00512 1426 aa26.28■■□□□ 1.8
PRKCB-209ENST00000498058 NBPF14Q5TI25 921 aa26.27■■□□□ 1.8
PRKCB-209ENST00000498058 HDGFL2Q7Z4V5 671 aaPredicted RBP26.27■■□□□ 1.8
PRKCB-209ENST00000498058 PROM2Q8N271 834 aa26.27■■□□□ 1.8
PRKCB-209ENST00000498058 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
PRKCB-209ENST00000498058 CCDC7Q96M83 1385 aa26.26■■□□□ 1.79
PRKCB-209ENST00000498058 ERBB3P21860 1342 aa26.25■■□□□ 1.79
PRKCB-209ENST00000498058 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
PRKCB-209ENST00000498058 ANO8Q9HCE9 1232 aaPredicted RBP26.25■■□□□ 1.79
PRKCB-209ENST00000498058 PUS7Q96PZ0 661 aaKnown RBP26.24■■□□□ 1.79
PRKCB-209ENST00000498058 EXOC5O00471 708 aa26.23■■□□□ 1.79
PRKCB-209ENST00000498058 TNS2Q63HR2 1409 aa26.22■■□□□ 1.79
PRKCB-209ENST00000498058 TERF2IPQ9NYB0 399 aa26.21■■□□□ 1.79
PRKCB-209ENST00000498058 KCNQ2O43526 872 aa26.2■■□□□ 1.78
PRKCB-209ENST00000498058 ANKRD24Q8TF21 1146 aa26.2■■□□□ 1.78
PRKCB-209ENST00000498058 NLRP2Q9NX02 1062 aa26.2■■□□□ 1.78
PRKCB-209ENST00000498058 PDGFDQ9GZP0 370 aaPredicted RBP26.19■■□□□ 1.78
PRKCB-209ENST00000498058 CASZ1Q86V15 1759 aa26.18■■□□□ 1.78
PRKCB-209ENST00000498058 FBLN1P23142 703 aa26.17■■□□□ 1.78
PRKCB-209ENST00000498058 NHSQ6T4R5 1651 aa26.15■■□□□ 1.78
PRKCB-209ENST00000498058 IL2RBP14784 551 aa26.15■■□□□ 1.78
PRKCB-209ENST00000498058 TXNRD1Q16881 649 aa26.14■■□□□ 1.78
PRKCB-209ENST00000498058 ACSBG1Q96GR2 724 aa26.14■■□□□ 1.78
PRKCB-209ENST00000498058 IP6K1Q92551 441 aa26.13■■□□□ 1.77
PRKCB-209ENST00000498058 SPON1Q9HCB6 807 aa26.13■■□□□ 1.77
PRKCB-209ENST00000498058 NINLQ9Y2I6 1382 aa26.12■■□□□ 1.77
PRKCB-209ENST00000498058 RGPD2P0DJD1 1756 aa26.1■■□□□ 1.77
PRKCB-209ENST00000498058 LTV1Q96GA3 475 aaPredicted RBP26.1■■□□□ 1.77
PRKCB-209ENST00000498058 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
PRKCB-209ENST00000498058 MAP3K19Q56UN5 1328 aa26.1■■□□□ 1.77
PRKCB-209ENST00000498058 BTAF1O14981 1849 aa26.09■■□□□ 1.77
PRKCB-209ENST00000498058 KAT6BQ8WYB5 2073 aa26.08■■□□□ 1.77
PRKCB-209ENST00000498058 ANKRD36BQ8N2N9 1353 aa26.07■■□□□ 1.76
PRKCB-209ENST00000498058 COG3Q96JB2 828 aa26.07■■□□□ 1.76
PRKCB-209ENST00000498058 USP47Q96K76 1375 aa26.07■■□□□ 1.76
PRKCB-209ENST00000498058 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
PRKCB-209ENST00000498058 HOXC9P31274 260 aa26.06■■□□□ 1.76
PRKCB-209ENST00000498058 ZBTB7AO95365 584 aa26.05■■□□□ 1.76
PRKCB-209ENST00000498058 SLC15A2Q16348 729 aa26.05■■□□□ 1.76
PRKCB-209ENST00000498058 PAPPAQ13219 1627 aa26.04■■□□□ 1.76
PRKCB-209ENST00000498058 PPP1R1BQ9UD71 204 aaPredicted RBP26.04■■□□□ 1.76
PRKCB-209ENST00000498058 FYB1O15117 783 aa26.03■■□□□ 1.76
PRKCB-209ENST00000498058 STK32BQ9NY57 414 aa26.03■■□□□ 1.76
PRKCB-209ENST00000498058 PTGER2P43116 358 aa26.02■■□□□ 1.76
PRKCB-209ENST00000498058 GGNBP2Q9H3C7 697 aa26.02■■□□□ 1.76
PRKCB-209ENST00000498058 SHANK3Q9BYB0 1731 aa26.02■■□□□ 1.76
PRKCB-209ENST00000498058 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
PRKCB-209ENST00000498058 MYOM1P52179 1685 aa26.01■■□□□ 1.75
PRKCB-209ENST00000498058 TMF1P82094 1093 aa26.01■■□□□ 1.75
PRKCB-209ENST00000498058 RRS1Q15050 365 aaKnown RBP26.01■■□□□ 1.75
PRKCB-209ENST00000498058 AMPHP49418 695 aa26■■□□□ 1.75
PRKCB-209ENST00000498058 DDX54Q8TDD1 881 aaKnown RBP26■■□□□ 1.75
PRKCB-209ENST00000498058 LRRC4BQ9NT99 713 aa26■■□□□ 1.75
PRKCB-209ENST00000498058 ATF5Q9Y2D1 282 aaPredicted RBP26■■□□□ 1.75
PRKCB-209ENST00000498058 MEGF6O75095 1541 aa25.98■■□□□ 1.75
PRKCB-209ENST00000498058 ZNF827Q17R98 1081 aa25.96■■□□□ 1.75
PRKCB-209ENST00000498058 NBPF6Q5VWK0 638 aa25.96■■□□□ 1.75
PRKCB-209ENST00000498058 NBPF4Q96M43 638 aa25.96■■□□□ 1.75
PRKCB-209ENST00000498058 KIF20BQ96Q89 1820 aa25.95■■□□□ 1.75
PRKCB-209ENST00000498058 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
PRKCB-209ENST00000498058 SGIP1Q9BQI5 828 aa25.94■■□□□ 1.74
PRKCB-209ENST00000498058 CARD14Q9BXL6 1004 aa25.94■■□□□ 1.74
PRKCB-209ENST00000498058 RTL1A6NKG5 1358 aa25.94■■□□□ 1.74
PRKCB-209ENST00000498058 USHBP1Q8N6Y0 703 aa25.93■■□□□ 1.74
PRKCB-209ENST00000498058 NSD2O96028 1365 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms