RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 COG3Q96JB2 828 aa14.94□□□□□ -0.02
SNRNP200-208ENST00000497539 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
SNRNP200-208ENST00000497539 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
SNRNP200-208ENST00000497539 IL13P35225 146 aa14.92□□□□□ -0.02
SNRNP200-208ENST00000497539 TMPOP42166 694 aaKnown RBP14.92□□□□□ -0.02
SNRNP200-208ENST00000497539 MYH16Q9H6N6 1097 aa14.92□□□□□ -0.02
SNRNP200-208ENST00000497539 NPHP4O75161 1426 aaPredicted RBP14.92□□□□□ -0.02
SNRNP200-208ENST00000497539 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
SNRNP200-208ENST00000497539 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
SNRNP200-208ENST00000497539 ADGRL3Q9HAR2 1447 aa14.9□□□□□ -0.02
SNRNP200-208ENST00000497539 CRBNQ96SW2 442 aa14.9□□□□□ -0.02
SNRNP200-208ENST00000497539 BACH2Q9BYV9 841 aa14.9□□□□□ -0.02
SNRNP200-208ENST00000497539 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
SNRNP200-208ENST00000497539 PDE3AQ14432 1141 aa14.89□□□□□ -0.03
SNRNP200-208ENST00000497539 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
SNRNP200-208ENST00000497539 KCNA6P17658 529 aa14.89□□□□□ -0.03
SNRNP200-208ENST00000497539 KIF24Q5T7B8 1368 aa14.89□□□□□ -0.03
SNRNP200-208ENST00000497539 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
SNRNP200-208ENST00000497539 EMILIN1Q9Y6C2 1016 aa14.88□□□□□ -0.03
SNRNP200-208ENST00000497539 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
SNRNP200-208ENST00000497539 DLG5Q8TDM6 1919 aa14.88□□□□□ -0.03
SNRNP200-208ENST00000497539 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
SNRNP200-208ENST00000497539 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
SNRNP200-208ENST00000497539 RARSP54136 660 aaKnown RBP14.86□□□□□ -0.03
SNRNP200-208ENST00000497539 C20orf194Q5TEA3 1177 aa14.86□□□□□ -0.03
SNRNP200-208ENST00000497539 KDM2BQ8NHM5 1336 aa14.86□□□□□ -0.03
SNRNP200-208ENST00000497539 NFE2L2Q16236 605 aa14.85□□□□□ -0.03
SNRNP200-208ENST00000497539 SBNO1A3KN83 1393 aa14.84□□□□□ -0.03
SNRNP200-208ENST00000497539 ARHGEF10O15013 1369 aa14.84□□□□□ -0.03
SNRNP200-208ENST00000497539 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
SNRNP200-208ENST00000497539 KIF1AQ12756 1690 aa14.84□□□□□ -0.03
SNRNP200-208ENST00000497539 BCAR3O75815 825 aa14.83□□□□□ -0.03
SNRNP200-208ENST00000497539 RIPK4P57078 832 aa14.83□□□□□ -0.04
SNRNP200-208ENST00000497539 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
SNRNP200-208ENST00000497539 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
SNRNP200-208ENST00000497539 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
SNRNP200-208ENST00000497539 FLT4P35916 1363 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 MST1RQ04912 1400 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 FBLN1P23142 703 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 RTL1A6NKG5 1358 aa14.81□□□□□ -0.04
SNRNP200-208ENST00000497539 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 KDRP35968 1356 aa14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 NFAT5O94916 1531 aa14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 MS4A1P11836 297 aa14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 NCOA3Q9Y6Q9 1424 aa14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
SNRNP200-208ENST00000497539 BRPF1P55201 1214 aaPredicted RBP14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 ZNF853P0CG23 659 aa14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 HOMEZQ8IX15 550 aa14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 NGDNQ8NEJ9 315 aaKnown RBP14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 LRRC37A3O60309 1634 aa14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
SNRNP200-208ENST00000497539 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
SNRNP200-208ENST00000497539 PHACTR3Q96KR7 559 aa14.78□□□□□ -0.04
SNRNP200-208ENST00000497539 SLIT3O75094 1523 aa14.78□□□□□ -0.04
SNRNP200-208ENST00000497539 LTN1O94822 1766 aa14.77□□□□□ -0.04
SNRNP200-208ENST00000497539 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.04
SNRNP200-208ENST00000497539 MAP3K19Q56UN5 1328 aa14.77□□□□□ -0.05
SNRNP200-208ENST00000497539 PMFBP1Q8TBY8 1022 aa14.77□□□□□ -0.05
SNRNP200-208ENST00000497539 BRPF3Q9ULD4 1205 aa14.77□□□□□ -0.05
SNRNP200-208ENST00000497539 DCCP43146 1447 aa14.76□□□□□ -0.05
SNRNP200-208ENST00000497539 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
SNRNP200-208ENST00000497539 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
SNRNP200-208ENST00000497539 PHF8Q9UPP1 1060 aa14.76□□□□□ -0.05
SNRNP200-208ENST00000497539 NUTM2FA1L443 756 aa14.75□□□□□ -0.05
SNRNP200-208ENST00000497539 HMOX1P09601 288 aa14.75□□□□□ -0.05
SNRNP200-208ENST00000497539 GNAI1P63096 354 aa14.75□□□□□ -0.05
SNRNP200-208ENST00000497539 IGSF1Q8N6C5 1336 aa14.75□□□□□ -0.05
SNRNP200-208ENST00000497539 STRCP1A6NGW2 1772 aa14.74□□□□□ -0.05
SNRNP200-208ENST00000497539 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
SNRNP200-208ENST00000497539 CAMTA1Q9Y6Y1 1673 aa14.74□□□□□ -0.05
SNRNP200-208ENST00000497539 NFKBIBQ15653 356 aa14.73□□□□□ -0.05
SNRNP200-208ENST00000497539 BRD2P25440 801 aaKnown RBP14.73□□□□□ -0.05
SNRNP200-208ENST00000497539 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
SNRNP200-208ENST00000497539 CLUAP1Q96AJ1 413 aa14.73□□□□□ -0.05
SNRNP200-208ENST00000497539 ALS2Q96Q42 1657 aa14.72□□□□□ -0.05
SNRNP200-208ENST00000497539 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
SNRNP200-208ENST00000497539 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
SNRNP200-208ENST00000497539 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
SNRNP200-208ENST00000497539 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
SNRNP200-208ENST00000497539 NCAPD2Q15021 1401 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 PANK1Q8TE04 598 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 SSH1Q8WYL5 1049 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 RGS3P49796 1198 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 GSE1Q14687 1217 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 SULT6B1Q6IMI4 303 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 C1orf167Q5SNV9 1468 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 CRB1P82279 1406 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
SNRNP200-208ENST00000497539 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 MVPQ14764 893 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 RRP9O43818 475 aaKnown RBP14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 RLBP1P12271 317 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 NLRP6P59044 892 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms