RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
HLA-B-254ENST00000497377 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
HLA-B-254ENST00000497377 CPDO75976 1380 aa15.94■□□□□ 0.14
HLA-B-254ENST00000497377 USP54Q70EL1 1684 aa15.93■□□□□ 0.14
HLA-B-254ENST00000497377 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
HLA-B-254ENST00000497377 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
HLA-B-254ENST00000497377 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
HLA-B-254ENST00000497377 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
HLA-B-254ENST00000497377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
HLA-B-254ENST00000497377 MYOM1P52179 1685 aa15.91■□□□□ 0.14
HLA-B-254ENST00000497377 BTG4Q9NY30 223 aa15.9■□□□□ 0.14
HLA-B-254ENST00000497377 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
HLA-B-254ENST00000497377 HAX1O00165 279 aa15.89■□□□□ 0.13
HLA-B-254ENST00000497377 SOCS7O14512 581 aa15.89■□□□□ 0.13
HLA-B-254ENST00000497377 VPS72Q15906 364 aa15.89■□□□□ 0.13
HLA-B-254ENST00000497377 GJD4Q96KN9 370 aaPredicted RBP15.89■□□□□ 0.13
HLA-B-254ENST00000497377 NME9Q86XW9 330 aa15.88■□□□□ 0.13
HLA-B-254ENST00000497377 LMO7Q8WWI1 1683 aa15.87■□□□□ 0.13
HLA-B-254ENST00000497377 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
HLA-B-254ENST00000497377 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
HLA-B-254ENST00000497377 OVOS2A0A0J9YW53 1432 aa15.86■□□□□ 0.13
HLA-B-254ENST00000497377 OVOS2Q6IE36 1432 aa15.86■□□□□ 0.13
HLA-B-254ENST00000497377 NFAT5O94916 1531 aa15.86■□□□□ 0.13
HLA-B-254ENST00000497377 ABCC6O95255 1503 aa15.85■□□□□ 0.13
HLA-B-254ENST00000497377 RGS12O14924 1447 aa15.85■□□□□ 0.13
HLA-B-254ENST00000497377 GLI3P10071 1580 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 CAMTA1Q9Y6Y1 1673 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 ARHGEF25Q86VW2 580 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 COG3Q96JB2 828 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
HLA-B-254ENST00000497377 CCDC9Q9Y3X0 531 aaKnown RBP15.84■□□□□ 0.13
HLA-B-254ENST00000497377 KIF20BQ96Q89 1820 aa15.83■□□□□ 0.12
HLA-B-254ENST00000497377 EVA1CP58658 441 aa15.83■□□□□ 0.12
HLA-B-254ENST00000497377 COL18A1P39060 1754 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 FYB1O15117 783 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 CARD14Q9BXL6 1004 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 SPATA31A5Q5VU36 1347 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 SPATA31A7Q8IWB4 1347 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
HLA-B-254ENST00000497377 C11orf95C9JLR9 678 aaPredicted RBP15.81■□□□□ 0.12
HLA-B-254ENST00000497377 SOX12O15370 315 aa15.81■□□□□ 0.12
HLA-B-254ENST00000497377 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
HLA-B-254ENST00000497377 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
HLA-B-254ENST00000497377 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
HLA-B-254ENST00000497377 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
HLA-B-254ENST00000497377 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
HLA-B-254ENST00000497377 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
HLA-B-254ENST00000497377 ZBTB7CA1YPR0 619 aa15.8■□□□□ 0.12
HLA-B-254ENST00000497377 LTN1O94822 1766 aa15.8■□□□□ 0.12
HLA-B-254ENST00000497377 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
HLA-B-254ENST00000497377 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
HLA-B-254ENST00000497377 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
HLA-B-254ENST00000497377 PANK3Q9H999 370 aa15.78■□□□□ 0.12
HLA-B-254ENST00000497377 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
HLA-B-254ENST00000497377 RGPD5Q99666 1765 aa15.77■□□□□ 0.11
HLA-B-254ENST00000497377 CRB1P82279 1406 aa15.77■□□□□ 0.11
HLA-B-254ENST00000497377 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
HLA-B-254ENST00000497377 FAM98CQ17RN3 349 aaKnown RBP15.76■□□□□ 0.11
HLA-B-254ENST00000497377 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
HLA-B-254ENST00000497377 BARGINQ6ZT62 677 aa15.76■□□□□ 0.11
HLA-B-254ENST00000497377 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
HLA-B-254ENST00000497377 AXIN2Q9Y2T1 843 aa15.76■□□□□ 0.11
HLA-B-254ENST00000497377 BLMP54132 1417 aaPredicted RBP15.76■□□□□ 0.11
HLA-B-254ENST00000497377 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
HLA-B-254ENST00000497377 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
HLA-B-254ENST00000497377 TCP11L2Q8N4U5 519 aa15.75■□□□□ 0.11
HLA-B-254ENST00000497377 NSD2O96028 1365 aa15.75■□□□□ 0.11
HLA-B-254ENST00000497377 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
HLA-B-254ENST00000497377 THSD7AQ9UPZ6 1657 aa15.74■□□□□ 0.11
HLA-B-254ENST00000497377 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
HLA-B-254ENST00000497377 IP6K1Q92551 441 aa15.74■□□□□ 0.11
HLA-B-254ENST00000497377 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
HLA-B-254ENST00000497377 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
HLA-B-254ENST00000497377 BRWD3Q6RI45 1802 aa15.73■□□□□ 0.11
HLA-B-254ENST00000497377 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
HLA-B-254ENST00000497377 A0A0G2JS52 829 aa15.73■□□□□ 0.11
HLA-B-254ENST00000497377 MYT1Q01538 1121 aa15.73■□□□□ 0.11
HLA-B-254ENST00000497377 TOM1L2Q6ZVM7 507 aa15.73■□□□□ 0.11
HLA-B-254ENST00000497377 CSB-PGBD3P0DP91 1061 aa15.72■□□□□ 0.11
HLA-B-254ENST00000497377 AMPHP49418 695 aa15.72■□□□□ 0.11
HLA-B-254ENST00000497377 CARD10Q9BWT7 1032 aa15.72■□□□□ 0.11
HLA-B-254ENST00000497377 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
HLA-B-254ENST00000497377 KNSTRNQ9Y448 316 aa15.72■□□□□ 0.11
HLA-B-254ENST00000497377 ERBB3P21860 1342 aa15.71■□□□□ 0.11
HLA-B-254ENST00000497377 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
HLA-B-254ENST00000497377 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
HLA-B-254ENST00000497377 KRT27Q7Z3Y8 459 aa15.71■□□□□ 0.11
HLA-B-254ENST00000497377 HOXC9P31274 260 aa15.7■□□□□ 0.1
HLA-B-254ENST00000497377 CDCA7Q9BWT1 371 aaPredicted RBP15.7■□□□□ 0.1
HLA-B-254ENST00000497377 ANKRD24Q8TF21 1146 aa15.69■□□□□ 0.1
HLA-B-254ENST00000497377 UPF1Q92900 1129 aaKnown RBP eCLIP15.69■□□□□ 0.15e-6■■■■□ 20.6
HLA-B-254ENST00000497377 EP400Q96L91 3159 aa15.69■□□□□ 0.1
HLA-B-254ENST00000497377 PARP4Q9UKK3 1724 aaKnown RBP15.68■□□□□ 0.1
HLA-B-254ENST00000497377 WNK3Q9BYP7 1800 aa15.68■□□□□ 0.1
HLA-B-254ENST00000497377 FLT4P35916 1363 aa15.68■□□□□ 0.1
HLA-B-254ENST00000497377 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
HLA-B-254ENST00000497377 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
HLA-B-254ENST00000497377 FBLN1P23142 703 aa15.67■□□□□ 0.1
HLA-B-254ENST00000497377 CCDC125Q86Z20 511 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms