RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PACS2Q86VP3 889 aa3.91□□□□□ -1.78
CKS1BP2-201ENST00000497342 LRRN4Q8WUT4 740 aa3.91□□□□□ -1.78
CKS1BP2-201ENST00000497342 PUS7Q96PZ0 661 aaKnown RBP3.91□□□□□ -1.78
CKS1BP2-201ENST00000497342 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.91□□□□□ -1.78
CKS1BP2-201ENST00000497342 ATP1B4Q9UN42 357 aaPredicted RBP3.91□□□□□ -1.78
CKS1BP2-201ENST00000497342 WIZO95785 1651 aa3.9□□□□□ -1.78
CKS1BP2-201ENST00000497342 PHLDB1Q86UU1 1377 aa3.9□□□□□ -1.78
CKS1BP2-201ENST00000497342 ADAMTS12P58397 1594 aa3.9□□□□□ -1.78
CKS1BP2-201ENST00000497342 SOWAHDA6NJG2 315 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 GABBR2O75899 941 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 PTPREP23469 700 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 ARID4AP29374 1257 aaPredicted RBP3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 SEMA3FQ13275 785 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 CSPP1Q1MSJ5 1256 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 SWI5Q1ZZU3 235 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 PHTF2Q8N3S3 785 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 PNMA1Q8ND90 353 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 EPS8L1Q8TE68 723 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 ZNF592Q92610 1267 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 SLAIN2Q9P270 581 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 EGFL7Q9UHF1 273 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 METRNQ9UJH8 293 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 SALL2Q9Y467 1007 aaPredicted RBP3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 GPSM3Q9Y4H4 160 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 EP400Q96L91 3159 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 CUL7Q14999 1698 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 CPS1P31327 1500 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 LRRC7Q96NW7 1537 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 KDM5BQ9UGL1 1544 aa3.9□□□□□ -1.79
CKS1BP2-201ENST00000497342 CARNS1A5YM72 827 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 HMGB1P09429 215 aaKnown RBP3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 NUDT7P0C024 238 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 PTK7Q13308 1070 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 GRIPAP1Q4V328 841 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 LYPD8Q6UX82 237 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 RETREG3Q86VR2 466 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 NPAS4Q8IUM7 802 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 PNMA3Q9UL41 463 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 FANCAO15360 1455 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 FER1L4A9Z1Z3 1794 aa3.89□□□□□ -1.79
CKS1BP2-201ENST00000497342 RAPGEF6Q8TEU7 1601 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 ABCA5Q8WWZ7 1642 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 WDR7Q9Y4E6 1490 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L3A6NCW0 530 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L4A6NCW7 530 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 ZBBXA8MT70 800 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 DKK1O94907 266 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 F12P00748 615 aaPredicted RBP3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 ZNF16P17020 682 aaPredicted RBP3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L2Q6R6M4 530 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L1Q7RTZ2 530 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 STK32AQ8WU08 396 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 ZBED2Q9BTP6 218 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 CDCA7Q9BWT1 371 aaPredicted RBP3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 NOVA2Q9UNW9 492 aaKnown RBP3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 CAMSAP1Q5T5Y3 1602 aa3.88□□□□□ -1.79
CKS1BP2-201ENST00000497342 ARHGEF12Q9NZN5 1544 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L15C9J2P7 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L10C9JJH3 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L13C9JLJ4 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L12C9JPN9 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L11C9JVI0 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L21D6R901 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L18D6R9N7 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L22D6RA61 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L17D6RBQ6 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L19D6RCP7 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L20D6RJB6 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 ATP5J2-PTCD1G3V325 749 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 RIMBP2O15034 1052 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 FBXO45P0C2W1 286 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 CANXP27824 592 aaKnown RBP3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 ATP6V1AP38606 617 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L24Q0WX57 530 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 NR6A1Q15406 480 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 ARSIQ5FYB1 569 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 TAS1R3Q7RTX0 852 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 FBXO33Q7Z6M2 555 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 CCDC125Q86Z20 511 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 RDH13Q8NBN7 331 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 GPKOWQ92917 476 aaPredicted RBP eCLIP3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 KHSRPQ92945 711 aaKnown RBP eCLIP3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 KCNH8Q96L42 1107 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 LHX6Q9UPM6 363 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 TTBK1Q5TCY1 1321 aaPredicted RBP3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 UTRNP46939 3433 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 UACAQ9BZF9 1416 aa3.87□□□□□ -1.79
CKS1BP2-201ENST00000497342 SHANK2Q9UPX8 1470 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 RUSC2Q8N2Y8 1516 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 ARHGEF40Q8TER5 1519 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 NHSL1Q5SYE7 1610 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 USP17L5A8MUK1 530 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 PER1O15534 1290 aaPredicted RBP3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 HSP90B1P14625 803 aaKnown RBP3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 GUCA2AQ02747 115 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 HLA-CQ95604 372 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 MRRFQ96E11 262 aaKnown RBP3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 FKBPLQ9UIM3 349 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 RABGEF1Q9UJ41 708 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 SIGLEC1Q9BZZ2 1709 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms