RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
ABCD4-217ENST00000496015 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
ABCD4-217ENST00000496015 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
ABCD4-217ENST00000496015 RGPD5Q99666 1765 aa19.14■□□□□ 0.66
ABCD4-217ENST00000496015 CSB-PGBD3P0DP91 1061 aa19.14■□□□□ 0.65
ABCD4-217ENST00000496015 WDR17Q8IZU2 1322 aa19.14■□□□□ 0.65
ABCD4-217ENST00000496015 USP31Q70CQ4 1352 aa19.14■□□□□ 0.65
ABCD4-217ENST00000496015 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.65
ABCD4-217ENST00000496015 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
ABCD4-217ENST00000496015 NME9Q86XW9 330 aa19.13■□□□□ 0.65
ABCD4-217ENST00000496015 AXIN2Q9Y2T1 843 aa19.13■□□□□ 0.65
ABCD4-217ENST00000496015 NFAT5O94916 1531 aa19.13■□□□□ 0.65
ABCD4-217ENST00000496015 USP54Q70EL1 1684 aa19.13■□□□□ 0.65
ABCD4-217ENST00000496015 ABCC6O95255 1503 aa19.12■□□□□ 0.65
ABCD4-217ENST00000496015 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
ABCD4-217ENST00000496015 USP47Q96K76 1375 aa19.12■□□□□ 0.65
ABCD4-217ENST00000496015 TRIM37O94972 964 aa19.12■□□□□ 0.65
ABCD4-217ENST00000496015 TMF1P82094 1093 aa19.12■□□□□ 0.65
ABCD4-217ENST00000496015 CDCA7Q9BWT1 371 aaPredicted RBP19.12■□□□□ 0.65
ABCD4-217ENST00000496015 TNS1Q9HBL0 1735 aaKnown RBP19.11■□□□□ 0.65
ABCD4-217ENST00000496015 EN1Q05925 392 aaPredicted RBP19.1■□□□□ 0.65
ABCD4-217ENST00000496015 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
ABCD4-217ENST00000496015 DISP2A7MBM2 1401 aa19.09■□□□□ 0.65
ABCD4-217ENST00000496015 LTN1O94822 1766 aa19.09■□□□□ 0.65
ABCD4-217ENST00000496015 DDB1Q16531 1140 aa19.09■□□□□ 0.65
ABCD4-217ENST00000496015 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
ABCD4-217ENST00000496015 APBA3O96018 575 aa19.08■□□□□ 0.64
ABCD4-217ENST00000496015 WNK3Q9BYP7 1800 aa19.07■□□□□ 0.64
ABCD4-217ENST00000496015 LRP5O75197 1615 aa19.07■□□□□ 0.64
ABCD4-217ENST00000496015 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
ABCD4-217ENST00000496015 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
ABCD4-217ENST00000496015 LRRC37A3O60309 1634 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 COG3Q96JB2 828 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 OVOS2A0A0J9YW53 1432 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 OVOS2Q6IE36 1432 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 ANKRD36BQ8N2N9 1353 aa19.05■□□□□ 0.64
ABCD4-217ENST00000496015 EZH2Q15910 746 aaKnown RBP19.03■□□□□ 0.64
ABCD4-217ENST00000496015 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
ABCD4-217ENST00000496015 NLRP2Q9NX02 1062 aa19.03■□□□□ 0.64
ABCD4-217ENST00000496015 EXOC5O00471 708 aa19.02■□□□□ 0.64
ABCD4-217ENST00000496015 CAMKK2Q96RR4 588 aa19.02■□□□□ 0.64
ABCD4-217ENST00000496015 ERBB3P21860 1342 aa19.01■□□□□ 0.63
ABCD4-217ENST00000496015 SBF2Q86WG5 1849 aa19.01■□□□□ 0.63
ABCD4-217ENST00000496015 PEAK1Q9H792 1746 aa19■□□□□ 0.63
ABCD4-217ENST00000496015 PSDA5PKW4 1024 aaPredicted RBP19■□□□□ 0.63
ABCD4-217ENST00000496015 ANKRD24Q8TF21 1146 aa19■□□□□ 0.63
ABCD4-217ENST00000496015 IP6K1Q92551 441 aa18.99■□□□□ 0.63
ABCD4-217ENST00000496015 AMPHP49418 695 aa18.97■□□□□ 0.63
ABCD4-217ENST00000496015 NBPF14Q5TI25 921 aa18.97■□□□□ 0.63
ABCD4-217ENST00000496015 MARCH10Q8NA82 808 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-217ENST00000496015 RREB1Q92766 1687 aa18.97■□□□□ 0.63
ABCD4-217ENST00000496015 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
ABCD4-217ENST00000496015 IL2RBP14784 551 aa18.96■□□□□ 0.63
ABCD4-217ENST00000496015 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
ABCD4-217ENST00000496015 BCL11BQ9C0K0 894 aaPredicted RBP18.96■□□□□ 0.63
ABCD4-217ENST00000496015 BCL9O00512 1426 aa18.96■□□□□ 0.63
ABCD4-217ENST00000496015 KIF20BQ96Q89 1820 aa18.95■□□□□ 0.62
ABCD4-217ENST00000496015 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
ABCD4-217ENST00000496015 FYB1O15117 783 aa18.94■□□□□ 0.62
ABCD4-217ENST00000496015 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
ABCD4-217ENST00000496015 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
ABCD4-217ENST00000496015 MAP3K19Q56UN5 1328 aa18.94■□□□□ 0.62
ABCD4-217ENST00000496015 RGPD3A6NKT7 1758 aaPredicted RBP18.93■□□□□ 0.62
ABCD4-217ENST00000496015 RGPD4Q7Z3J3 1758 aa18.93■□□□□ 0.62
ABCD4-217ENST00000496015 PLSCR1O15162 318 aa18.93■□□□□ 0.62
ABCD4-217ENST00000496015 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
ABCD4-217ENST00000496015 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
ABCD4-217ENST00000496015 HOXC9P31274 260 aa18.92■□□□□ 0.62
ABCD4-217ENST00000496015 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
ABCD4-217ENST00000496015 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
ABCD4-217ENST00000496015 MYOM1P52179 1685 aa18.9■□□□□ 0.62
ABCD4-217ENST00000496015 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
ABCD4-217ENST00000496015 FBLN1P23142 703 aa18.88■□□□□ 0.61
ABCD4-217ENST00000496015 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
ABCD4-217ENST00000496015 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
ABCD4-217ENST00000496015 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
ABCD4-217ENST00000496015 NSD3Q9BZ95 1437 aa18.87■□□□□ 0.61
ABCD4-217ENST00000496015 PTF1AQ7RTS3 328 aa18.86■□□□□ 0.61
ABCD4-217ENST00000496015 RGPD2P0DJD1 1756 aa18.86■□□□□ 0.61
ABCD4-217ENST00000496015 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
ABCD4-217ENST00000496015 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
ABCD4-217ENST00000496015 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
ABCD4-217ENST00000496015 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
ABCD4-217ENST00000496015 ACSBG1Q96GR2 724 aa18.84■□□□□ 0.61
ABCD4-217ENST00000496015 FLT4P35916 1363 aa18.83■□□□□ 0.61
ABCD4-217ENST00000496015 KCNQ2O43526 872 aa18.83■□□□□ 0.6
ABCD4-217ENST00000496015 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.6
ABCD4-217ENST00000496015 INSRP06213 1382 aa18.81■□□□□ 0.6
ABCD4-217ENST00000496015 TXNRD1Q16881 649 aa18.81■□□□□ 0.6
ABCD4-217ENST00000496015 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
ABCD4-217ENST00000496015 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
ABCD4-217ENST00000496015 BTAF1O14981 1849 aa18.8■□□□□ 0.6
ABCD4-217ENST00000496015 HSP90AB2PQ58FF8 381 aa18.8■□□□□ 0.6
ABCD4-217ENST00000496015 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
ABCD4-217ENST00000496015 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
ABCD4-217ENST00000496015 MAP2P11137 1827 aaKnown RBP18.79■□□□□ 0.6
ABCD4-217ENST00000496015 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
ABCD4-217ENST00000496015 PROM2Q8N271 834 aa18.79■□□□□ 0.6
ABCD4-217ENST00000496015 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms