RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 USP54Q70EL1 1684 aa26.27■■□□□ 1.8
LINC01558-202ENST00000495520 ROBO1Q9Y6N7 1651 aa26.27■■□□□ 1.8
LINC01558-202ENST00000495520 TOM1O60784 492 aa26.27■■□□□ 1.8
LINC01558-202ENST00000495520 TMPOP42166 694 aaKnown RBP26.26■■□□□ 1.79
LINC01558-202ENST00000495520 CERKQ8TCT0 537 aa26.26■■□□□ 1.79
LINC01558-202ENST00000495520 SOX12O15370 315 aa26.25■■□□□ 1.79
LINC01558-202ENST00000495520 NHSL1Q5SYE7 1610 aa26.24■■□□□ 1.79
LINC01558-202ENST00000495520 SBNO1A3KN83 1393 aa26.24■■□□□ 1.79
LINC01558-202ENST00000495520 UBAP1LF5GYI3 381 aa26.23■■□□□ 1.79
LINC01558-202ENST00000495520 NEUROD2Q15784 382 aa26.23■■□□□ 1.79
LINC01558-202ENST00000495520 MAPK8IP3Q9UPT6 1336 aa26.23■■□□□ 1.79
LINC01558-202ENST00000495520 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
LINC01558-202ENST00000495520 PLEKHG5O94827 1062 aa26.22■■□□□ 1.79
LINC01558-202ENST00000495520 PIP4K2BP78356 416 aa26.22■■□□□ 1.79
LINC01558-202ENST00000495520 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
LINC01558-202ENST00000495520 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
LINC01558-202ENST00000495520 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
LINC01558-202ENST00000495520 TNS3Q68CZ2 1445 aa26.21■■□□□ 1.79
LINC01558-202ENST00000495520 ALS2Q96Q42 1657 aa26.21■■□□□ 1.79
LINC01558-202ENST00000495520 PEAK1Q9H792 1746 aa26.2■■□□□ 1.78
LINC01558-202ENST00000495520 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
LINC01558-202ENST00000495520 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
LINC01558-202ENST00000495520 IL16Q14005 1332 aa26.18■■□□□ 1.78
LINC01558-202ENST00000495520 MAP3K19Q56UN5 1328 aa26.17■■□□□ 1.78
LINC01558-202ENST00000495520 EIF4A2Q14240 407 aaKnown RBP26.17■■□□□ 1.78
LINC01558-202ENST00000495520 KIF24Q5T7B8 1368 aa26.17■■□□□ 1.78
LINC01558-202ENST00000495520 AHDC1Q5TGY3 1603 aaPredicted RBP26.15■■□□□ 1.78
LINC01558-202ENST00000495520 RIPK4P57078 832 aa26.15■■□□□ 1.78
LINC01558-202ENST00000495520 ARHGEF10O15013 1369 aa26.14■■□□□ 1.78
LINC01558-202ENST00000495520 MYH16Q9H6N6 1097 aa26.14■■□□□ 1.78
LINC01558-202ENST00000495520 HMOX1P09601 288 aa26.13■■□□□ 1.77
LINC01558-202ENST00000495520 NFE2L2Q16236 605 aa26.13■■□□□ 1.77
LINC01558-202ENST00000495520 HSP90AB2PQ58FF8 381 aa26.13■■□□□ 1.77
LINC01558-202ENST00000495520 PHACTR3Q96KR7 559 aa26.13■■□□□ 1.77
LINC01558-202ENST00000495520 FLT4P35916 1363 aa26.13■■□□□ 1.77
LINC01558-202ENST00000495520 RGPD1P0DJD0 1748 aa26.12■■□□□ 1.77
LINC01558-202ENST00000495520 USP19O94966 1318 aa26.12■■□□□ 1.77
LINC01558-202ENST00000495520 NEFMP07197 916 aa26.12■■□□□ 1.77
LINC01558-202ENST00000495520 KCNH5Q8NCM2 988 aa26.12■■□□□ 1.77
LINC01558-202ENST00000495520 SLIT3O75094 1523 aa26.11■■□□□ 1.77
LINC01558-202ENST00000495520 MED1Q15648 1581 aaPredicted RBP26.1■■□□□ 1.77
LINC01558-202ENST00000495520 PLIN1O60240 522 aa26.1■■□□□ 1.77
LINC01558-202ENST00000495520 GCP02774 474 aa26.09■■□□□ 1.77
LINC01558-202ENST00000495520 NFAT5O94916 1531 aa26.09■■□□□ 1.77
LINC01558-202ENST00000495520 B4GALNT3Q6L9W6 998 aa26.09■■□□□ 1.77
LINC01558-202ENST00000495520 CABLES1Q8TDN4 633 aa26.09■■□□□ 1.77
LINC01558-202ENST00000495520 PHLPP1O60346 1717 aa26.08■■□□□ 1.77
LINC01558-202ENST00000495520 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.08■■□□□ 1.77
LINC01558-202ENST00000495520 EXOC6Q8TAG9 804 aa26.08■■□□□ 1.77
LINC01558-202ENST00000495520 ZBTB7CA1YPR0 619 aa26.07■■□□□ 1.76
LINC01558-202ENST00000495520 LRRC59Q96AG4 307 aaKnown RBP26.07■■□□□ 1.76
LINC01558-202ENST00000495520 CT47B1P0C2W7 299 aaPredicted RBP26.06■■□□□ 1.76
LINC01558-202ENST00000495520 AMPHP49418 695 aa26.06■■□□□ 1.76
LINC01558-202ENST00000495520 PHRF1Q9P1Y6 1649 aaKnown RBP26.06■■□□□ 1.76
LINC01558-202ENST00000495520 LTN1O94822 1766 aa26.05■■□□□ 1.76
LINC01558-202ENST00000495520 SULT6B1Q6IMI4 303 aa26.04■■□□□ 1.76
LINC01558-202ENST00000495520 FANCIQ9NVI1 1328 aa26.04■■□□□ 1.76
LINC01558-202ENST00000495520 RTL1A6NKG5 1358 aa26.04■■□□□ 1.76
LINC01558-202ENST00000495520 COL16A1Q07092 1604 aaPredicted RBP26.03■■□□□ 1.76
LINC01558-202ENST00000495520 CRYBG1Q9Y4K1 1723 aa26.03■■□□□ 1.76
LINC01558-202ENST00000495520 BCAR3O75815 825 aa26.03■■□□□ 1.76
LINC01558-202ENST00000495520 HOXC9P31274 260 aa26.03■■□□□ 1.76
LINC01558-202ENST00000495520 RARSP54136 660 aaKnown RBP26.03■■□□□ 1.76
LINC01558-202ENST00000495520 AEBP1Q8IUX7 1158 aa26.03■■□□□ 1.76
LINC01558-202ENST00000495520 KDRP35968 1356 aa26.02■■□□□ 1.76
LINC01558-202ENST00000495520 ZC3H6P61129 1189 aaKnown RBP26.02■■□□□ 1.76
LINC01558-202ENST00000495520 HAP1P54257 671 aaPredicted RBP26.01■■□□□ 1.75
LINC01558-202ENST00000495520 C20orf194Q5TEA3 1177 aa26.01■■□□□ 1.75
LINC01558-202ENST00000495520 IGSF1Q8N6C5 1336 aa26.01■■□□□ 1.75
LINC01558-202ENST00000495520 CRBNQ96SW2 442 aa26.01■■□□□ 1.75
LINC01558-202ENST00000495520 CALD1Q05682 793 aaKnown RBP26■■□□□ 1.75
LINC01558-202ENST00000495520 LMOD3Q0VAK6 560 aa26■■□□□ 1.75
LINC01558-202ENST00000495520 ARHGEF25Q86VW2 580 aa25.99■■□□□ 1.75
LINC01558-202ENST00000495520 CCDC136Q96JN2 1154 aa25.99■■□□□ 1.75
LINC01558-202ENST00000495520 ZNF853P0CG23 659 aa25.97■■□□□ 1.75
LINC01558-202ENST00000495520 TSR2Q969E8 191 aaKnown RBP25.97■■□□□ 1.75
LINC01558-202ENST00000495520 EYA1Q99502 592 aa25.97■■□□□ 1.75
LINC01558-202ENST00000495520 ABCA3Q99758 1704 aa25.97■■□□□ 1.75
LINC01558-202ENST00000495520 IP6K1Q92551 441 aa25.96■■□□□ 1.75
LINC01558-202ENST00000495520 PDE3AQ14432 1141 aa25.96■■□□□ 1.75
LINC01558-202ENST00000495520 EXOSC9Q06265 439 aaKnown RBP25.95■■□□□ 1.74
LINC01558-202ENST00000495520 IFT57Q9NWB7 429 aa25.95■■□□□ 1.74
LINC01558-202ENST00000495520 DLG5Q8TDM6 1919 aa25.94■■□□□ 1.74
LINC01558-202ENST00000495520 KIAA0232Q92628 1395 aa25.94■■□□□ 1.74
LINC01558-202ENST00000495520 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
LINC01558-202ENST00000495520 COL22A1Q8NFW1 1626 aaPredicted RBP25.93■■□□□ 1.74
LINC01558-202ENST00000495520 CPDO75976 1380 aa25.91■■□□□ 1.74
LINC01558-202ENST00000495520 GNAI1P63096 354 aa25.91■■□□□ 1.74
LINC01558-202ENST00000495520 CHRNA2Q15822 529 aa25.91■■□□□ 1.74
LINC01558-202ENST00000495520 PRDM11Q9NQV5 511 aa25.9■■□□□ 1.74
LINC01558-202ENST00000495520 CFAP44Q96MT7 982 aa25.89■■□□□ 1.73
LINC01558-202ENST00000495520 THUMPD2Q9BTF0 503 aaKnown RBP25.89■■□□□ 1.73
LINC01558-202ENST00000495520 TSHZ2Q9NRE2 1034 aa25.89■■□□□ 1.73
LINC01558-202ENST00000495520 AXIN2Q9Y2T1 843 aa25.89■■□□□ 1.73
LINC01558-202ENST00000495520 ZNF428Q96B54 188 aa25.88■■□□□ 1.73
LINC01558-202ENST00000495520 HSPA1LP34931 641 aa25.86■■□□□ 1.73
LINC01558-202ENST00000495520 RGPD5Q99666 1765 aa25.85■■□□□ 1.73
LINC01558-202ENST00000495520 FAM83GA6ND36 823 aa25.85■■□□□ 1.73
LINC01558-202ENST00000495520 MTHFSDQ2M296 383 aaKnown RBP25.85■■□□□ 1.73
LINC01558-202ENST00000495520 COL18A1P39060 1754 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms