RNA–Protein interactions for RNA: ENST00000495360.5

APTX-232, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 1,313 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-232ENST00000495360 USP47Q96K76 1375 aa24.34■■□□□ 1.49
APTX-232ENST00000495360 USP54Q70EL1 1684 aa24.34■■□□□ 1.49
APTX-232ENST00000495360 SLC24A1O60721 1099 aa24.34■■□□□ 1.49
APTX-232ENST00000495360 TOM1L2Q6ZVM7 507 aa24.34■■□□□ 1.49
APTX-232ENST00000495360 AXIN2Q9Y2T1 843 aa24.34■■□□□ 1.49
APTX-232ENST00000495360 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.49
APTX-232ENST00000495360 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
APTX-232ENST00000495360 FAM196AQ6ZSG2 479 aa24.33■■□□□ 1.48
APTX-232ENST00000495360 WDR17Q8IZU2 1322 aa24.32■■□□□ 1.48
APTX-232ENST00000495360 TNS1Q9HBL0 1735 aaKnown RBP24.31■■□□□ 1.48
APTX-232ENST00000495360 PARP4Q9UKK3 1724 aaKnown RBP24.31■■□□□ 1.48
APTX-232ENST00000495360 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
APTX-232ENST00000495360 ABCC6O95255 1503 aa24.3■■□□□ 1.48
APTX-232ENST00000495360 CSB-PGBD3P0DP91 1061 aa24.29■■□□□ 1.48
APTX-232ENST00000495360 TRIM37O94972 964 aa24.28■■□□□ 1.48
APTX-232ENST00000495360 TMF1P82094 1093 aa24.28■■□□□ 1.48
APTX-232ENST00000495360 DISP2A7MBM2 1401 aa24.27■■□□□ 1.48
APTX-232ENST00000495360 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
APTX-232ENST00000495360 RGPD5Q99666 1765 aa24.27■■□□□ 1.48
APTX-232ENST00000495360 LRRC37A3O60309 1634 aa24.27■■□□□ 1.48
APTX-232ENST00000495360 OVOS2A0A0J9YW53 1432 aa24.25■■□□□ 1.47
APTX-232ENST00000495360 OVOS2Q6IE36 1432 aa24.25■■□□□ 1.47
APTX-232ENST00000495360 WNK3Q9BYP7 1800 aa24.25■■□□□ 1.47
APTX-232ENST00000495360 CARD10Q9BWT7 1032 aa24.23■■□□□ 1.47
APTX-232ENST00000495360 LTN1O94822 1766 aa24.23■■□□□ 1.47
APTX-232ENST00000495360 ANKRD36BQ8N2N9 1353 aa24.23■■□□□ 1.47
APTX-232ENST00000495360 DDB1Q16531 1140 aa24.22■■□□□ 1.47
APTX-232ENST00000495360 OVOS2A0A0G2JMS6 1433 aa24.21■■□□□ 1.47
APTX-232ENST00000495360 CDCA7Q9BWT1 371 aaPredicted RBP24.21■■□□□ 1.47
APTX-232ENST00000495360 APBA3O96018 575 aa24.2■■□□□ 1.46
APTX-232ENST00000495360 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
APTX-232ENST00000495360 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
APTX-232ENST00000495360 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
APTX-232ENST00000495360 ERBB3P21860 1342 aa24.19■■□□□ 1.46
APTX-232ENST00000495360 PEAK1Q9H792 1746 aa24.18■■□□□ 1.46
APTX-232ENST00000495360 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
APTX-232ENST00000495360 CCER1Q8TC90 406 aaPredicted RBP24.17■■□□□ 1.46
APTX-232ENST00000495360 COG3Q96JB2 828 aa24.17■■□□□ 1.46
APTX-232ENST00000495360 CAMKK2Q96RR4 588 aa24.17■■□□□ 1.46
APTX-232ENST00000495360 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
APTX-232ENST00000495360 PSDA5PKW4 1024 aaPredicted RBP24.15■■□□□ 1.46
APTX-232ENST00000495360 NLRP2Q9NX02 1062 aa24.15■■□□□ 1.46
APTX-232ENST00000495360 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.46
APTX-232ENST00000495360 MARCH10Q8NA82 808 aaPredicted RBP24.12■■□□□ 1.45
APTX-232ENST00000495360 RREB1Q92766 1687 aa24.11■■□□□ 1.45
APTX-232ENST00000495360 TNS2Q63HR2 1409 aa24.11■■□□□ 1.45
APTX-232ENST00000495360 MYOM1P52179 1685 aa24.11■■□□□ 1.45
APTX-232ENST00000495360 EXOC5O00471 708 aa24.1■■□□□ 1.45
APTX-232ENST00000495360 IP6K1Q92551 441 aa24.1■■□□□ 1.45
APTX-232ENST00000495360 MAP3K19Q56UN5 1328 aa24.09■■□□□ 1.45
APTX-232ENST00000495360 FYB1O15117 783 aa24.09■■□□□ 1.45
APTX-232ENST00000495360 R3HDM1Q15032 1099 aaKnown RBP24.09■■□□□ 1.45
APTX-232ENST00000495360 GGNBP2Q9H3C7 697 aa24.09■■□□□ 1.45
APTX-232ENST00000495360 BCL9O00512 1426 aa24.08■■□□□ 1.45
APTX-232ENST00000495360 LTV1Q96GA3 475 aaPredicted RBP24.08■■□□□ 1.44
APTX-232ENST00000495360 NUP188Q5SRE5 1749 aa24.08■■□□□ 1.44
APTX-232ENST00000495360 SBF2Q86WG5 1849 aa24.07■■□□□ 1.44
APTX-232ENST00000495360 FAM208AQ9UK61 1670 aaKnown RBP24.07■■□□□ 1.44
APTX-232ENST00000495360 IL2RBP14784 551 aa24.07■■□□□ 1.44
APTX-232ENST00000495360 FBLN1P23142 703 aa24.07■■□□□ 1.44
APTX-232ENST00000495360 AMPHP49418 695 aa24.07■■□□□ 1.44
APTX-232ENST00000495360 LRP5O75197 1615 aa24.06■■□□□ 1.44
APTX-232ENST00000495360 KIF20BQ96Q89 1820 aa24.06■■□□□ 1.44
APTX-232ENST00000495360 HOXC9P31274 260 aa24.06■■□□□ 1.44
APTX-232ENST00000495360 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
APTX-232ENST00000495360 NSD3Q9BZ95 1437 aa24.04■■□□□ 1.44
APTX-232ENST00000495360 RTL1A6NKG5 1358 aa24.04■■□□□ 1.44
APTX-232ENST00000495360 PTF1AQ7RTS3 328 aa24.04■■□□□ 1.44
APTX-232ENST00000495360 RGPD3A6NKT7 1758 aaPredicted RBP24.03■■□□□ 1.44
APTX-232ENST00000495360 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
APTX-232ENST00000495360 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
APTX-232ENST00000495360 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
APTX-232ENST00000495360 CARD14Q9BXL6 1004 aa24.02■■□□□ 1.44
APTX-232ENST00000495360 PLSCR1O15162 318 aa24.01■■□□□ 1.43
APTX-232ENST00000495360 EIF4G2P78344 907 aaKnown RBP eCLIP24.01■■□□□ 1.43
APTX-232ENST00000495360 POLR3GLQ9BT43 218 aa24.01■■□□□ 1.43
APTX-232ENST00000495360 HSPA5P11021 654 aaKnown RBP23.98■■□□□ 1.43
APTX-232ENST00000495360 NHSQ6T4R5 1651 aa23.97■■□□□ 1.43
APTX-232ENST00000495360 SMG6Q86US8 1419 aaKnown RBP23.96■■□□□ 1.43
APTX-232ENST00000495360 KCNQ2O43526 872 aa23.95■■□□□ 1.42
APTX-232ENST00000495360 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
APTX-232ENST00000495360 FLT4P35916 1363 aa23.94■■□□□ 1.42
APTX-232ENST00000495360 RGPD2P0DJD1 1756 aa23.93■■□□□ 1.42
APTX-232ENST00000495360 CGNL1Q0VF96 1302 aa23.93■■□□□ 1.42
APTX-232ENST00000495360 INSRP06213 1382 aa23.92■■□□□ 1.42
APTX-232ENST00000495360 KIF24Q5T7B8 1368 aa23.92■■□□□ 1.42
APTX-232ENST00000495360 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
APTX-232ENST00000495360 MEGF6O75095 1541 aa23.91■■□□□ 1.42
APTX-232ENST00000495360 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
APTX-232ENST00000495360 NBPF6Q5VWK0 638 aa23.9■■□□□ 1.42
APTX-232ENST00000495360 PROM2Q8N271 834 aa23.9■■□□□ 1.42
APTX-232ENST00000495360 NBPF4Q96M43 638 aa23.9■■□□□ 1.42
APTX-232ENST00000495360 TXNRD1Q16881 649 aa23.89■■□□□ 1.42
APTX-232ENST00000495360 USHBP1Q8N6Y0 703 aa23.89■■□□□ 1.42
APTX-232ENST00000495360 EMILIN1Q9Y6C2 1016 aa23.89■■□□□ 1.42
APTX-232ENST00000495360 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
APTX-232ENST00000495360 ZCRB1Q8TBF4 217 aaKnown RBP23.86■■□□□ 1.41
APTX-232ENST00000495360 SHANK3Q9BYB0 1731 aa23.85■■□□□ 1.41
APTX-232ENST00000495360 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
APTX-232ENST00000495360 RAPGEF4Q8WZA2 1011 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms