RNA–Protein interactions for RNA: ENST00000495123.5

PKP4-216, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-216ENST00000495123 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
PKP4-216ENST00000495123 LMO7Q8WWI1 1683 aa11.96□□□□□ -0.5
PKP4-216ENST00000495123 RXRBP28702 533 aa11.95□□□□□ -0.5
PKP4-216ENST00000495123 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
PKP4-216ENST00000495123 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
PKP4-216ENST00000495123 COG3Q96JB2 828 aa11.95□□□□□ -0.5
PKP4-216ENST00000495123 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
PKP4-216ENST00000495123 FBLN1P23142 703 aa11.94□□□□□ -0.5
PKP4-216ENST00000495123 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
PKP4-216ENST00000495123 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
PKP4-216ENST00000495123 GLI3P10071 1580 aa11.93□□□□□ -0.5
PKP4-216ENST00000495123 COL18A1P39060 1754 aa11.93□□□□□ -0.5
PKP4-216ENST00000495123 VPS72Q15906 364 aa11.93□□□□□ -0.5
PKP4-216ENST00000495123 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
PKP4-216ENST00000495123 STRN4Q9NRL3 753 aa11.93□□□□□ -0.5
PKP4-216ENST00000495123 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
PKP4-216ENST00000495123 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
PKP4-216ENST00000495123 RGS12O14924 1447 aa11.92□□□□□ -0.5
PKP4-216ENST00000495123 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
PKP4-216ENST00000495123 COL5A2P05997 1499 aaPredicted RBP11.91□□□□□ -0.5
PKP4-216ENST00000495123 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
PKP4-216ENST00000495123 EVA1CP58658 441 aa11.9□□□□□ -0.5
PKP4-216ENST00000495123 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
PKP4-216ENST00000495123 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
PKP4-216ENST00000495123 LTN1O94822 1766 aa11.9□□□□□ -0.51
PKP4-216ENST00000495123 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
PKP4-216ENST00000495123 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
PKP4-216ENST00000495123 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
PKP4-216ENST00000495123 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
PKP4-216ENST00000495123 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
PKP4-216ENST00000495123 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
PKP4-216ENST00000495123 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
PKP4-216ENST00000495123 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
PKP4-216ENST00000495123 ABCC6O95255 1503 aa11.88□□□□□ -0.51
PKP4-216ENST00000495123 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
PKP4-216ENST00000495123 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
PKP4-216ENST00000495123 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
PKP4-216ENST00000495123 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
PKP4-216ENST00000495123 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
PKP4-216ENST00000495123 HOXC9P31274 260 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
PKP4-216ENST00000495123 IP6K1Q92551 441 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 NSD2O96028 1365 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 CRB1P82279 1406 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 ERBB3P21860 1342 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
PKP4-216ENST00000495123 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
PKP4-216ENST00000495123 CSB-PGBD3P0DP91 1061 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
PKP4-216ENST00000495123 AMPHP49418 695 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 PEAK1Q9H792 1746 aa11.85□□□□□ -0.51
PKP4-216ENST00000495123 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
PKP4-216ENST00000495123 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
PKP4-216ENST00000495123 LTV1Q96GA3 475 aaPredicted RBP11.84□□□□□ -0.51
PKP4-216ENST00000495123 A0A0G2JS52 829 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 SOCS7O14512 581 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 MYT1Q01538 1121 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
PKP4-216ENST00000495123 BARGINQ6ZT62 677 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
PKP4-216ENST00000495123 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
PKP4-216ENST00000495123 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
PKP4-216ENST00000495123 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
PKP4-216ENST00000495123 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
PKP4-216ENST00000495123 THRAP3Q9Y2W1 955 aaKnown RBP11.82□□□□□ -0.52
PKP4-216ENST00000495123 FLT4P35916 1363 aa11.81□□□□□ -0.52
PKP4-216ENST00000495123 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
PKP4-216ENST00000495123 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
PKP4-216ENST00000495123 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
PKP4-216ENST00000495123 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
PKP4-216ENST00000495123 INSRP06213 1382 aa11.8□□□□□ -0.52
PKP4-216ENST00000495123 KIF24Q5T7B8 1368 aa11.8□□□□□ -0.52
PKP4-216ENST00000495123 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
PKP4-216ENST00000495123 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
PKP4-216ENST00000495123 DISP2A7MBM2 1401 aa11.79□□□□□ -0.52
PKP4-216ENST00000495123 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
PKP4-216ENST00000495123 KRT27Q7Z3Y8 459 aa11.79□□□□□ -0.52
PKP4-216ENST00000495123 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
PKP4-216ENST00000495123 RGPD2P0DJD1 1756 aa11.78□□□□□ -0.52
PKP4-216ENST00000495123 DDX10Q13206 875 aaKnown RBP11.78□□□□□ -0.52
PKP4-216ENST00000495123 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
PKP4-216ENST00000495123 PARP4Q9UKK3 1724 aaKnown RBP11.77□□□□□ -0.52
PKP4-216ENST00000495123 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
PKP4-216ENST00000495123 NBPF6Q5VWK0 638 aa11.77□□□□□ -0.53
PKP4-216ENST00000495123 NBPF4Q96M43 638 aa11.77□□□□□ -0.53
PKP4-216ENST00000495123 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
PKP4-216ENST00000495123 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
PKP4-216ENST00000495123 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
PKP4-216ENST00000495123 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
PKP4-216ENST00000495123 IL2RBP14784 551 aa11.75□□□□□ -0.53
PKP4-216ENST00000495123 MTHFSP49914 203 aa11.75□□□□□ -0.53
PKP4-216ENST00000495123 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
PKP4-216ENST00000495123 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
PKP4-216ENST00000495123 CAPN15O75808 1086 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms