RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OVOS2A0A0G2JMS6 1433 aa33.06■■■□□ 2.88
COL27A1-208ENST00000494780 OVOS2A0A0J9YW53 1432 aa33.06■■■□□ 2.88
COL27A1-208ENST00000494780 OVOS2Q6IE36 1432 aa33.06■■■□□ 2.88
COL27A1-208ENST00000494780 DDB1Q16531 1140 aa33.05■■■□□ 2.88
COL27A1-208ENST00000494780 LRRC37A3O60309 1634 aa33.05■■■□□ 2.88
COL27A1-208ENST00000494780 MON2Q7Z3U7 1717 aa33.03■■■□□ 2.88
COL27A1-208ENST00000494780 PEAK1Q9H792 1746 aa33.03■■■□□ 2.88
COL27A1-208ENST00000494780 SOX12O15370 315 aa33.03■■■□□ 2.88
COL27A1-208ENST00000494780 CDCA7Q9BWT1 371 aaPredicted RBP33.03■■■□□ 2.88
COL27A1-208ENST00000494780 NFAT5O94916 1531 aa33.02■■■□□ 2.88
COL27A1-208ENST00000494780 TONSLQ96HA7 1378 aa33.01■■■□□ 2.88
COL27A1-208ENST00000494780 NBPF14Q5TI25 921 aa33.01■■■□□ 2.87
COL27A1-208ENST00000494780 NUP188Q5SRE5 1749 aa33.01■■■□□ 2.87
COL27A1-208ENST00000494780 CARD10Q9BWT7 1032 aa33■■■□□ 2.87
COL27A1-208ENST00000494780 WNK3Q9BYP7 1800 aa33■■■□□ 2.87
COL27A1-208ENST00000494780 CSB-PGBD3P0DP91 1061 aa32.99■■■□□ 2.87
COL27A1-208ENST00000494780 USP31Q70CQ4 1352 aa32.98■■■□□ 2.87
COL27A1-208ENST00000494780 ABCC6O95255 1503 aa32.98■■■□□ 2.87
COL27A1-208ENST00000494780 RGPD5Q99666 1765 aa32.98■■■□□ 2.87
COL27A1-208ENST00000494780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.97■■■□□ 2.87
COL27A1-208ENST00000494780 CD163L1Q9NR16 1453 aa32.97■■■□□ 2.87
COL27A1-208ENST00000494780 TMC1Q8TDI8 760 aa32.95■■■□□ 2.87
COL27A1-208ENST00000494780 USP54Q70EL1 1684 aa32.94■■■□□ 2.86
COL27A1-208ENST00000494780 HDGFL2Q7Z4V5 671 aaPredicted RBP32.94■■■□□ 2.86
COL27A1-208ENST00000494780 SBF2Q86WG5 1849 aa32.93■■■□□ 2.86
COL27A1-208ENST00000494780 MARCH10Q8NA82 808 aaPredicted RBP32.93■■■□□ 2.86
COL27A1-208ENST00000494780 PUS7Q96PZ0 661 aaKnown RBP32.93■■■□□ 2.86
COL27A1-208ENST00000494780 CCDC7Q96M83 1385 aa32.93■■■□□ 2.86
COL27A1-208ENST00000494780 BCL9O00512 1426 aa32.93■■■□□ 2.86
COL27A1-208ENST00000494780 RGPD3A6NKT7 1758 aaPredicted RBP32.92■■■□□ 2.86
COL27A1-208ENST00000494780 RGPD4Q7Z3J3 1758 aa32.92■■■□□ 2.86
COL27A1-208ENST00000494780 PLSCR1O15162 318 aa32.92■■■□□ 2.86
COL27A1-208ENST00000494780 BCL11BQ9C0K0 894 aaPredicted RBP32.92■■■□□ 2.86
COL27A1-208ENST00000494780 NME9Q86XW9 330 aa32.91■■■□□ 2.86
COL27A1-208ENST00000494780 SLC12A5Q9H2X9 1139 aa32.91■■■□□ 2.86
COL27A1-208ENST00000494780 EDC4Q6P2E9 1401 aaKnown RBP32.89■■■□□ 2.86
COL27A1-208ENST00000494780 TERF2IPQ9NYB0 399 aa32.89■■■□□ 2.86
COL27A1-208ENST00000494780 EXOC5O00471 708 aa32.88■■■□□ 2.85
COL27A1-208ENST00000494780 A0A1W2PP64 1363 aa32.84■■■□□ 2.85
COL27A1-208ENST00000494780 ERBB3P21860 1342 aa32.84■■■□□ 2.85
COL27A1-208ENST00000494780 PTF1AQ7RTS3 328 aa32.84■■■□□ 2.85
COL27A1-208ENST00000494780 TNS2Q63HR2 1409 aa32.81■■■□□ 2.84
COL27A1-208ENST00000494780 LTN1O94822 1766 aa32.81■■■□□ 2.84
COL27A1-208ENST00000494780 SLC24A1O60721 1099 aa32.8■■■□□ 2.84
COL27A1-208ENST00000494780 NINLQ9Y2I6 1382 aa32.8■■■□□ 2.84
COL27A1-208ENST00000494780 TESK2Q96S53 571 aa32.79■■■□□ 2.84
COL27A1-208ENST00000494780 NLRP2Q9NX02 1062 aa32.79■■■□□ 2.84
COL27A1-208ENST00000494780 SPON1Q9HCB6 807 aa32.78■■■□□ 2.84
COL27A1-208ENST00000494780 ST20-MTHFSA0A0A6YYL1 179 aa32.77■■■□□ 2.84
COL27A1-208ENST00000494780 ANKRD24Q8TF21 1146 aa32.76■■■□□ 2.83
COL27A1-208ENST00000494780 KCNQ2O43526 872 aa32.75■■■□□ 2.83
COL27A1-208ENST00000494780 PROM2Q8N271 834 aa32.75■■■□□ 2.83
COL27A1-208ENST00000494780 ANO8Q9HCE9 1232 aaPredicted RBP32.75■■■□□ 2.83
COL27A1-208ENST00000494780 IL2RBP14784 551 aa32.74■■■□□ 2.83
COL27A1-208ENST00000494780 TRIM26Q12899 539 aaPredicted RBP32.69■■■□□ 2.82
COL27A1-208ENST00000494780 TXNRD1Q16881 649 aa32.69■■■□□ 2.82
COL27A1-208ENST00000494780 IP6K1Q92551 441 aa32.69■■■□□ 2.82
COL27A1-208ENST00000494780 PPP1R1BQ9UD71 204 aaPredicted RBP32.69■■■□□ 2.82
COL27A1-208ENST00000494780 NHSQ6T4R5 1651 aa32.68■■■□□ 2.82
COL27A1-208ENST00000494780 CASZ1Q86V15 1759 aa32.66■■■□□ 2.82
COL27A1-208ENST00000494780 COG3Q96JB2 828 aa32.66■■■□□ 2.82
COL27A1-208ENST00000494780 ACSBG1Q96GR2 724 aa32.64■■■□□ 2.82
COL27A1-208ENST00000494780 STK32BQ9NY57 414 aa32.64■■■□□ 2.82
COL27A1-208ENST00000494780 ANKRD36BQ8N2N9 1353 aa32.63■■■□□ 2.81
COL27A1-208ENST00000494780 FAM208AQ9UK61 1670 aaKnown RBP32.62■■■□□ 2.81
COL27A1-208ENST00000494780 MAP3K19Q56UN5 1328 aa32.6■■■□□ 2.81
COL27A1-208ENST00000494780 SLC15A2Q16348 729 aa32.6■■■□□ 2.81
COL27A1-208ENST00000494780 TMF1P82094 1093 aa32.59■■■□□ 2.81
COL27A1-208ENST00000494780 LTV1Q96GA3 475 aaPredicted RBP32.59■■■□□ 2.81
COL27A1-208ENST00000494780 PDGFDQ9GZP0 370 aaPredicted RBP32.59■■■□□ 2.81
COL27A1-208ENST00000494780 USP47Q96K76 1375 aa32.58■■■□□ 2.81
COL27A1-208ENST00000494780 HOXC9P31274 260 aa32.57■■■□□ 2.8
COL27A1-208ENST00000494780 AMPHP49418 695 aa32.57■■■□□ 2.8
COL27A1-208ENST00000494780 ZBTB7AO95365 584 aa32.54■■■□□ 2.8
COL27A1-208ENST00000494780 BTAF1O14981 1849 aa32.54■■■□□ 2.8
COL27A1-208ENST00000494780 FBLN1P23142 703 aa32.53■■■□□ 2.8
COL27A1-208ENST00000494780 DDX54Q8TDD1 881 aaKnown RBP32.52■■■□□ 2.8
COL27A1-208ENST00000494780 RTL1A6NKG5 1358 aa32.52■■■□□ 2.8
COL27A1-208ENST00000494780 FYB1O15117 783 aa32.51■■■□□ 2.79
COL27A1-208ENST00000494780 CDCA8Q53HL2 280 aa32.51■■■□□ 2.79
COL27A1-208ENST00000494780 DCAF8L1A6NGE4 600 aa32.5■■■□□ 2.79
COL27A1-208ENST00000494780 PTGER2P43116 358 aa32.5■■■□□ 2.79
COL27A1-208ENST00000494780 PAPPAQ13219 1627 aa32.48■■■□□ 2.79
COL27A1-208ENST00000494780 GGNBP2Q9H3C7 697 aa32.48■■■□□ 2.79
COL27A1-208ENST00000494780 ATF5Q9Y2D1 282 aaPredicted RBP32.48■■■□□ 2.79
COL27A1-208ENST00000494780 KAT6BQ8WYB5 2073 aa32.47■■■□□ 2.79
COL27A1-208ENST00000494780 MTFR1LQ9H019 292 aa32.47■■■□□ 2.79
COL27A1-208ENST00000494780 RRS1Q15050 365 aaKnown RBP32.46■■■□□ 2.79
COL27A1-208ENST00000494780 MYOM1P52179 1685 aa32.44■■■□□ 2.78
COL27A1-208ENST00000494780 ZCRB1Q8TBF4 217 aaKnown RBP32.44■■■□□ 2.78
COL27A1-208ENST00000494780 RGPD2P0DJD1 1756 aa32.43■■■□□ 2.78
COL27A1-208ENST00000494780 LRRC4BQ9NT99 713 aa32.43■■■□□ 2.78
COL27A1-208ENST00000494780 TIMELESSQ9UNS1 1208 aa32.43■■■□□ 2.78
COL27A1-208ENST00000494780 YY1P25490 414 aa32.42■■■□□ 2.78
COL27A1-208ENST00000494780 SLC27A3Q5K4L6 730 aa32.42■■■□□ 2.78
COL27A1-208ENST00000494780 MEGF6O75095 1541 aa32.41■■■□□ 2.78
COL27A1-208ENST00000494780 SMG6Q86US8 1419 aaKnown RBP32.41■■■□□ 2.78
COL27A1-208ENST00000494780 NBPF6Q5VWK0 638 aa32.4■■■□□ 2.78
COL27A1-208ENST00000494780 NBPF4Q96M43 638 aa32.4■■■□□ 2.78
COL27A1-208ENST00000494780 ZNF827Q17R98 1081 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms