RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
ABCA1-204ENST00000494467 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
ABCA1-204ENST00000494467 JCADQ9P266 1359 aa12.38□□□□□ -0.43
ABCA1-204ENST00000494467 DIAPH1O60610 1272 aaKnown RBP12.37□□□□□ -0.43
ABCA1-204ENST00000494467 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
ABCA1-204ENST00000494467 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
ABCA1-204ENST00000494467 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
ABCA1-204ENST00000494467 KDRP35968 1356 aa12.36□□□□□ -0.43
ABCA1-204ENST00000494467 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
ABCA1-204ENST00000494467 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
ABCA1-204ENST00000494467 AMPHP49418 695 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
ABCA1-204ENST00000494467 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
ABCA1-204ENST00000494467 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
ABCA1-204ENST00000494467 KIAA0232Q92628 1395 aa12.34□□□□□ -0.43
ABCA1-204ENST00000494467 FCHSD2O94868 740 aa12.34□□□□□ -0.43
ABCA1-204ENST00000494467 EIF4A2Q14240 407 aaKnown RBP12.34□□□□□ -0.43
ABCA1-204ENST00000494467 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
ABCA1-204ENST00000494467 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCA1-204ENST00000494467 CABLES1Q8TDN4 633 aa12.33□□□□□ -0.44
ABCA1-204ENST00000494467 ERBB3P21860 1342 aa12.33□□□□□ -0.44
ABCA1-204ENST00000494467 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
ABCA1-204ENST00000494467 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
ABCA1-204ENST00000494467 HSPA1LP34931 641 aa12.31□□□□□ -0.44
ABCA1-204ENST00000494467 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
ABCA1-204ENST00000494467 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
ABCA1-204ENST00000494467 SLIT2O94813 1529 aa12.31□□□□□ -0.44
ABCA1-204ENST00000494467 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
ABCA1-204ENST00000494467 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
ABCA1-204ENST00000494467 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
ABCA1-204ENST00000494467 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
ABCA1-204ENST00000494467 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
ABCA1-204ENST00000494467 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
ABCA1-204ENST00000494467 SOX12O15370 315 aa12.29□□□□□ -0.44
ABCA1-204ENST00000494467 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
ABCA1-204ENST00000494467 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
ABCA1-204ENST00000494467 EYA1Q99502 592 aa12.29□□□□□ -0.44
ABCA1-204ENST00000494467 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
ABCA1-204ENST00000494467 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
ABCA1-204ENST00000494467 U2AF1L5P0DN76 240 aaPredicted RBP12.28□□□□□ -0.44
ABCA1-204ENST00000494467 U2AF1Q01081 240 aaKnown RBP eCLIP12.28□□□□□ -0.44
ABCA1-204ENST00000494467 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
ABCA1-204ENST00000494467 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
ABCA1-204ENST00000494467 LRP6O75581 1613 aa12.27□□□□□ -0.44
ABCA1-204ENST00000494467 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
ABCA1-204ENST00000494467 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.45
ABCA1-204ENST00000494467 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
ABCA1-204ENST00000494467 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
ABCA1-204ENST00000494467 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 ZBED9Q6R2W3 1325 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 CRB1P82279 1406 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
ABCA1-204ENST00000494467 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
ABCA1-204ENST00000494467 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
ABCA1-204ENST00000494467 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
ABCA1-204ENST00000494467 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
ABCA1-204ENST00000494467 SULT6B1Q6IMI4 303 aa12.24□□□□□ -0.45
ABCA1-204ENST00000494467 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
ABCA1-204ENST00000494467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.451e-7■□□□□ 10.8
ABCA1-204ENST00000494467 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
ABCA1-204ENST00000494467 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
ABCA1-204ENST00000494467 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
ABCA1-204ENST00000494467 DISP2A7MBM2 1401 aa12.22□□□□□ -0.45
ABCA1-204ENST00000494467 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
ABCA1-204ENST00000494467 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
ABCA1-204ENST00000494467 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
ABCA1-204ENST00000494467 HMOX1P09601 288 aa12.21□□□□□ -0.45
ABCA1-204ENST00000494467 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
ABCA1-204ENST00000494467 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
ABCA1-204ENST00000494467 THRAP3Q9Y2W1 955 aaKnown RBP12.21□□□□□ -0.45
ABCA1-204ENST00000494467 LRRC37A3O60309 1634 aa12.21□□□□□ -0.46
ABCA1-204ENST00000494467 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 APAF1O14727 1248 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
ABCA1-204ENST00000494467 NEFMP07197 916 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
ABCA1-204ENST00000494467 PDE3BQ13370 1112 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 UNC5CLQ8IV45 518 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
ABCA1-204ENST00000494467 LARP1Q6PKG0 1096 aaKnown RBP12.19□□□□□ -0.46
ABCA1-204ENST00000494467 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
ABCA1-204ENST00000494467 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
ABCA1-204ENST00000494467 MEGF6O75095 1541 aa12.19□□□□□ -0.46
ABCA1-204ENST00000494467 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
ABCA1-204ENST00000494467 IL16Q14005 1332 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 SPATA31A1Q5TZJ5 1347 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
ABCA1-204ENST00000494467 EVA1CP58658 441 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms