RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 USP31Q70CQ4 1352 aa31.38■■■□□ 2.61
CDKN2A-206ENST00000494262 RGPD1P0DJD0 1748 aa31.38■■■□□ 2.61
CDKN2A-206ENST00000494262 FAM196AQ6ZSG2 479 aa31.37■■■□□ 2.61
CDKN2A-206ENST00000494262 TOM1L2Q6ZVM7 507 aa31.37■■■□□ 2.61
CDKN2A-206ENST00000494262 USP47Q96K76 1375 aa31.37■■■□□ 2.61
CDKN2A-206ENST00000494262 EDC4Q6P2E9 1401 aaKnown RBP31.37■■■□□ 2.61
CDKN2A-206ENST00000494262 NINLQ9Y2I6 1382 aa31.34■■■□□ 2.61
CDKN2A-206ENST00000494262 WDR17Q8IZU2 1322 aa31.34■■■□□ 2.61
CDKN2A-206ENST00000494262 CLSPNQ9HAW4 1339 aa31.34■■■□□ 2.61
CDKN2A-206ENST00000494262 USP54Q70EL1 1684 aa31.33■■■□□ 2.61
CDKN2A-206ENST00000494262 TIMELESSQ9UNS1 1208 aa31.33■■■□□ 2.61
CDKN2A-206ENST00000494262 PARP4Q9UKK3 1724 aaKnown RBP31.32■■■□□ 2.6
CDKN2A-206ENST00000494262 RGPD5Q99666 1765 aa31.31■■■□□ 2.6
CDKN2A-206ENST00000494262 TRIM37O94972 964 aa31.31■■■□□ 2.6
CDKN2A-206ENST00000494262 CSB-PGBD3P0DP91 1061 aa31.31■■■□□ 2.6
CDKN2A-206ENST00000494262 TNS1Q9HBL0 1735 aaKnown RBP31.3■■■□□ 2.6
CDKN2A-206ENST00000494262 EN1Q05925 392 aaPredicted RBP31.3■■■□□ 2.6
CDKN2A-206ENST00000494262 TMF1P82094 1093 aa31.29■■■□□ 2.6
CDKN2A-206ENST00000494262 ABCC6O95255 1503 aa31.28■■■□□ 2.6
CDKN2A-206ENST00000494262 DISP2A7MBM2 1401 aa31.26■■■□□ 2.6
CDKN2A-206ENST00000494262 CARD10Q9BWT7 1032 aa31.24■■■□□ 2.59
CDKN2A-206ENST00000494262 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
CDKN2A-206ENST00000494262 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
CDKN2A-206ENST00000494262 DDB1Q16531 1140 aa31.23■■■□□ 2.59
CDKN2A-206ENST00000494262 LRRC37A3O60309 1634 aa31.23■■■□□ 2.59
CDKN2A-206ENST00000494262 APBA3O96018 575 aa31.22■■■□□ 2.59
CDKN2A-206ENST00000494262 LTN1O94822 1766 aa31.22■■■□□ 2.59
CDKN2A-206ENST00000494262 WNK3Q9BYP7 1800 aa31.21■■■□□ 2.59
CDKN2A-206ENST00000494262 ANKRD36BQ8N2N9 1353 aa31.21■■■□□ 2.59
CDKN2A-206ENST00000494262 CDCA7Q9BWT1 371 aaPredicted RBP31.21■■■□□ 2.59
CDKN2A-206ENST00000494262 EZH2Q15910 746 aaKnown RBP31.2■■■□□ 2.59
CDKN2A-206ENST00000494262 CDCA8Q53HL2 280 aa31.19■■■□□ 2.58
CDKN2A-206ENST00000494262 OVOS2A0A0G2JMS6 1433 aa31.18■■■□□ 2.58
CDKN2A-206ENST00000494262 CCER1Q8TC90 406 aaPredicted RBP31.18■■■□□ 2.58
CDKN2A-206ENST00000494262 C11orf95C9JLR9 678 aaPredicted RBP31.17■■■□□ 2.58
CDKN2A-206ENST00000494262 COG3Q96JB2 828 aa31.17■■■□□ 2.58
CDKN2A-206ENST00000494262 CAMKK2Q96RR4 588 aa31.17■■■□□ 2.58
CDKN2A-206ENST00000494262 ERBB3P21860 1342 aa31.17■■■□□ 2.58
CDKN2A-206ENST00000494262 CCDC7Q96M83 1385 aa31.17■■■□□ 2.58
CDKN2A-206ENST00000494262 PSDA5PKW4 1024 aaPredicted RBP31.15■■■□□ 2.58
CDKN2A-206ENST00000494262 PEAK1Q9H792 1746 aa31.15■■■□□ 2.58
CDKN2A-206ENST00000494262 ANKRD24Q8TF21 1146 aa31.14■■■□□ 2.58
CDKN2A-206ENST00000494262 NLRP2Q9NX02 1062 aa31.14■■■□□ 2.58
CDKN2A-206ENST00000494262 MARCH10Q8NA82 808 aaPredicted RBP31.12■■■□□ 2.57
CDKN2A-206ENST00000494262 PARD3Q8TEW0 1356 aa31.12■■■□□ 2.57
CDKN2A-206ENST00000494262 EXOC5O00471 708 aa31.09■■■□□ 2.57
CDKN2A-206ENST00000494262 IP6K1Q92551 441 aa31.09■■■□□ 2.57
CDKN2A-206ENST00000494262 R3HDM1Q15032 1099 aaKnown RBP31.07■■■□□ 2.56
CDKN2A-206ENST00000494262 MAP3K19Q56UN5 1328 aa31.06■■■□□ 2.56
CDKN2A-206ENST00000494262 FYB1O15117 783 aa31.06■■■□□ 2.56
CDKN2A-206ENST00000494262 FBLN1P23142 703 aa31.06■■■□□ 2.56
CDKN2A-206ENST00000494262 GGNBP2Q9H3C7 697 aa31.06■■■□□ 2.56
CDKN2A-206ENST00000494262 SBF2Q86WG5 1849 aa31.05■■■□□ 2.56
CDKN2A-206ENST00000494262 LTV1Q96GA3 475 aaPredicted RBP31.05■■■□□ 2.56
CDKN2A-206ENST00000494262 TNS2Q63HR2 1409 aa31.05■■■□□ 2.56
CDKN2A-206ENST00000494262 RREB1Q92766 1687 aa31.04■■■□□ 2.56
CDKN2A-206ENST00000494262 AMPHP49418 695 aa31.04■■■□□ 2.56
CDKN2A-206ENST00000494262 IL2RBP14784 551 aa31.03■■■□□ 2.56
CDKN2A-206ENST00000494262 BCL9O00512 1426 aa31.03■■■□□ 2.56
CDKN2A-206ENST00000494262 MYOM1P52179 1685 aa31.03■■■□□ 2.56
CDKN2A-206ENST00000494262 HOXC9P31274 260 aa31.02■■■□□ 2.56
CDKN2A-206ENST00000494262 BCL11BQ9C0K0 894 aaPredicted RBP31.02■■■□□ 2.56
CDKN2A-206ENST00000494262 PTF1AQ7RTS3 328 aa31.01■■■□□ 2.55
CDKN2A-206ENST00000494262 NUP188Q5SRE5 1749 aa31■■■□□ 2.55
CDKN2A-206ENST00000494262 CARD14Q9BXL6 1004 aa30.99■■■□□ 2.55
CDKN2A-206ENST00000494262 KIF20BQ96Q89 1820 aa30.98■■■□□ 2.55
CDKN2A-206ENST00000494262 RRS1Q15050 365 aaKnown RBP30.98■■■□□ 2.55
CDKN2A-206ENST00000494262 NSD3Q9BZ95 1437 aa30.98■■■□□ 2.55
CDKN2A-206ENST00000494262 FAM208AQ9UK61 1670 aaKnown RBP30.97■■■□□ 2.55
CDKN2A-206ENST00000494262 RTL1A6NKG5 1358 aa30.96■■■□□ 2.55
CDKN2A-206ENST00000494262 LRP5O75197 1615 aa30.96■■■□□ 2.55
CDKN2A-206ENST00000494262 EIF4G2P78344 907 aaKnown RBP eCLIP30.96■■■□□ 2.55
CDKN2A-206ENST00000494262 NBPF14Q5TI25 921 aa30.96■■■□□ 2.55
CDKN2A-206ENST00000494262 POLR3GLQ9BT43 218 aa30.96■■■□□ 2.55
CDKN2A-206ENST00000494262 PLSCR1O15162 318 aa30.95■■■□□ 2.55
CDKN2A-206ENST00000494262 HSPA5P11021 654 aaKnown RBP30.94■■■□□ 2.54
CDKN2A-206ENST00000494262 RGPD3A6NKT7 1758 aaPredicted RBP30.94■■■□□ 2.54
CDKN2A-206ENST00000494262 RGPD4Q7Z3J3 1758 aa30.94■■■□□ 2.54
CDKN2A-206ENST00000494262 KCNQ2O43526 872 aa30.89■■■□□ 2.54
CDKN2A-206ENST00000494262 ACSBG1Q96GR2 724 aa30.89■■■□□ 2.54
CDKN2A-206ENST00000494262 RGPD2P0DJD1 1756 aa30.87■■■□□ 2.53
CDKN2A-206ENST00000494262 NHSQ6T4R5 1651 aa30.87■■■□□ 2.53
CDKN2A-206ENST00000494262 SMG6Q86US8 1419 aaKnown RBP30.86■■■□□ 2.53
CDKN2A-206ENST00000494262 DDX54Q8TDD1 881 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-206ENST00000494262 FLT4P35916 1363 aa30.84■■■□□ 2.53
CDKN2A-206ENST00000494262 CGNL1Q0VF96 1302 aa30.84■■■□□ 2.53
CDKN2A-206ENST00000494262 HSP90AB2PQ58FF8 381 aa30.84■■■□□ 2.53
CDKN2A-206ENST00000494262 PROM2Q8N271 834 aa30.84■■■□□ 2.53
CDKN2A-206ENST00000494262 NBPF6Q5VWK0 638 aa30.83■■■□□ 2.53
CDKN2A-206ENST00000494262 NBPF4Q96M43 638 aa30.83■■■□□ 2.53
CDKN2A-206ENST00000494262 INSRP06213 1382 aa30.82■■■□□ 2.52
CDKN2A-206ENST00000494262 USHBP1Q8N6Y0 703 aa30.82■■■□□ 2.52
CDKN2A-206ENST00000494262 KIF24Q5T7B8 1368 aa30.81■■■□□ 2.52
CDKN2A-206ENST00000494262 MEGF6O75095 1541 aa30.8■■■□□ 2.52
CDKN2A-206ENST00000494262 TXNRD1Q16881 649 aa30.8■■■□□ 2.52
CDKN2A-206ENST00000494262 ANO8Q9HCE9 1232 aaPredicted RBP30.8■■■□□ 2.52
CDKN2A-206ENST00000494262 EMILIN1Q9Y6C2 1016 aa30.8■■■□□ 2.52
CDKN2A-206ENST00000494262 KAT6BQ8WYB5 2073 aa30.79■■■□□ 2.52
CDKN2A-206ENST00000494262 ZCRB1Q8TBF4 217 aaKnown RBP30.78■■■□□ 2.52
CDKN2A-206ENST00000494262 PPM1GO15355 546 aaPredicted RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms