RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RUNDC1Q96C34 613 aa9.25□□□□□ -0.93
BRCA1-221ENST00000493795 IFFO1Q0D2I5 559 aa9.25□□□□□ -0.93
BRCA1-221ENST00000493795 IMMTQ16891 758 aaKnown RBP9.25□□□□□ -0.93
BRCA1-221ENST00000493795 GIGYF2Q6Y7W6 1299 aaKnown RBP9.25□□□□□ -0.93
BRCA1-221ENST00000493795 KIF2AO00139 706 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-221ENST00000493795 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
BRCA1-221ENST00000493795 KRT85P78386 507 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 UBE4AQ14139 1066 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 RNF187Q5TA31 235 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-221ENST00000493795 NACAP1Q9BZK3 213 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 CYP46A1Q9Y6A2 500 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC158Q5M9N0 1113 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 C6orf163Q5TEZ5 329 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 RAPGEF4Q8WZA2 1011 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 SPA17Q15506 151 aa9.24□□□□□ -0.93
BRCA1-221ENST00000493795 GSTTP1A0A1W2PQM5 241 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 CDKL5O76039 1030 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 GNAI3P08754 354 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 FERP16591 822 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 BMS1Q14692 1282 aaKnown RBP9.23□□□□□ -0.93
BRCA1-221ENST00000493795 HOOK3Q86VS8 718 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 SSBP05455 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
BRCA1-221ENST00000493795 KIF6Q6ZMV9 814 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 UPF3BQ9BZI7 483 aaKnown RBP9.23□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC175P0C221 793 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
BRCA1-221ENST00000493795 CARMIL1Q5VZK9 1371 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 MYO15BQ96JP2 1530 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 ZSCAN12O43309 604 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 PSME1Q06323 249 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 GPATCH11Q8N954 259 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 CASQ1P31415 396 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 GRPEL1Q9HAV7 217 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 COMMD10Q9Y6G5 202 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 VGFO15240 615 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-221ENST00000493795 SURF6O75683 361 aaKnown RBP9.22□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
BRCA1-221ENST00000493795 ZNF76P36508 570 aa9.21□□□□□ -0.93
BRCA1-221ENST00000493795 SPECC1LQ69YQ0 1117 aa9.21□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC144AA2RUR9 1427 aa9.21□□□□□ -0.93
BRCA1-221ENST00000493795 SPATA32Q96LK8 384 aa9.21□□□□□ -0.93
BRCA1-221ENST00000493795 NUP62CLQ9H1M0 184 aa9.21□□□□□ -0.93
BRCA1-221ENST00000493795 PABPN1LA6NDY0 278 aaKnown RBP9.21□□□□□ -0.94
BRCA1-221ENST00000493795 KIF5CO60282 957 aa9.21□□□□□ -0.94
BRCA1-221ENST00000493795 STK3Q13188 491 aa9.21□□□□□ -0.94
BRCA1-221ENST00000493795 LARP1Q6PKG0 1096 aaKnown RBP9.21□□□□□ -0.94
BRCA1-221ENST00000493795 VPS36Q86VN1 386 aa9.21□□□□□ -0.94
BRCA1-221ENST00000493795 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
BRCA1-221ENST00000493795 FILIP1Q7Z7B0 1213 aa9.21□□□□□ -0.94
BRCA1-221ENST00000493795 NUP133Q8WUM0 1156 aa9.21□□□□□ -0.94
BRCA1-221ENST00000493795 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 CCDC30Q5VVM6 783 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 WASF1Q92558 559 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 TAOK3Q9H2K8 898 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 CNNM1Q9NRU3 951 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 CEP131Q9UPN4 1083 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 ZWINTO95229 277 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 FKBP15Q5T1M5 1219 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 MINK1Q8N4C8 1332 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-221ENST00000493795 IPO4Q8TEX9 1081 aaKnown RBP9.2□□□□□ -0.94
BRCA1-221ENST00000493795 HOMER2Q9NSB8 354 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-221ENST00000493795 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
BRCA1-221ENST00000493795 TSNARE1Q96NA8 513 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 TSG101Q99816 390 aa9.2□□□□□ -0.94
BRCA1-221ENST00000493795 CGNQ9P2M7 1197 aaKnown RBP9.2□□□□□ -0.94
BRCA1-221ENST00000493795 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
BRCA1-221ENST00000493795 POLR3GO15318 223 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-221ENST00000493795 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
BRCA1-221ENST00000493795 V9GYY5 206 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-221ENST00000493795 CTNNBL1Q8WYA6 563 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-221ENST00000493795 CFAP100Q494V2 611 aa9.19□□□□□ -0.94
BRCA1-221ENST00000493795 PPP4R3AQ6IN85 833 aa9.19□□□□□ -0.94
BRCA1-221ENST00000493795 PANK1Q8TE04 598 aa9.19□□□□□ -0.94
BRCA1-221ENST00000493795 TNIP1Q15025 636 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 MPNDQ8N594 471 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 GCC1Q96CN9 775 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 CCDC83Q8IWF9 413 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 ZSCAN31Q96LW9 406 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 CCDC150Q8NCX0 1101 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 PAFAH1B1P43034 410 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 SEPT6Q14141 434 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
BRCA1-221ENST00000493795 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 HNRNPMP52272 730 aaKnown RBP eCLIP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 SMARCC1Q92922 1105 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 NAA15Q9BXJ9 866 aaKnown RBP9.18□□□□□ -0.94
BRCA1-221ENST00000493795 FSD2A1L4K1 749 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 SFPQP23246 707 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-221ENST00000493795 CTNNA2P26232 953 aa9.17□□□□□ -0.94
BRCA1-221ENST00000493795 CACNA2D4Q7Z3S7 1137 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms