RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 U2AF1L5P0DN76 240 aaPredicted RBP12.35□□□□□ -0.43
TSC1-207ENST00000493467 U2AF1Q01081 240 aaKnown RBP eCLIP12.35□□□□□ -0.436e-10■■■■□ 20.2
TSC1-207ENST00000493467 IDI1Q13907 227 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
TSC1-207ENST00000493467 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 RWDD1Q9H446 243 aaPredicted RBP12.35□□□□□ -0.43
TSC1-207ENST00000493467 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
TSC1-207ENST00000493467 TRIM66O15016 1216 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
TSC1-207ENST00000493467 BECN1Q14457 450 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
TSC1-207ENST00000493467 SETD1AO15047 1707 aaKnown RBP12.33□□□□□ -0.44
TSC1-207ENST00000493467 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
TSC1-207ENST00000493467 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 SEC24BO95487 1268 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 PYGBP11216 843 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
TSC1-207ENST00000493467 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
TSC1-207ENST00000493467 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
TSC1-207ENST00000493467 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
TSC1-207ENST00000493467 ATP7BP35670 1465 aa12.32□□□□□ -0.44
TSC1-207ENST00000493467 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
TSC1-207ENST00000493467 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
TSC1-207ENST00000493467 BCL2L13Q9BXK5 485 aa12.31□□□□□ -0.44
TSC1-207ENST00000493467 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
TSC1-207ENST00000493467 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
TSC1-207ENST00000493467 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
TSC1-207ENST00000493467 PPIP5K1Q6PFW1 1433 aa12.31□□□□□ -0.44
TSC1-207ENST00000493467 FYB1O15117 783 aa12.3□□□□□ -0.44
TSC1-207ENST00000493467 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
TSC1-207ENST00000493467 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
TSC1-207ENST00000493467 AGLP35573 1532 aa12.3□□□□□ -0.44
TSC1-207ENST00000493467 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
TSC1-207ENST00000493467 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
TSC1-207ENST00000493467 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
TSC1-207ENST00000493467 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
TSC1-207ENST00000493467 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
TSC1-207ENST00000493467 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
TSC1-207ENST00000493467 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
TSC1-207ENST00000493467 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
TSC1-207ENST00000493467 TRAK2O60296 914 aa12.29□□□□□ -0.44
TSC1-207ENST00000493467 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
TSC1-207ENST00000493467 HDGFL2Q7Z4V5 671 aaPredicted RBP12.29□□□□□ -0.44
TSC1-207ENST00000493467 TSR2Q969E8 191 aaKnown RBP12.29□□□□□ -0.44
TSC1-207ENST00000493467 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
TSC1-207ENST00000493467 SPATA31D1Q6ZQQ2 1576 aa12.28□□□□□ -0.44
TSC1-207ENST00000493467 TRIM27P14373 513 aa12.28□□□□□ -0.44
TSC1-207ENST00000493467 FOXD4L5Q5VV16 416 aaPredicted RBP12.28□□□□□ -0.44
TSC1-207ENST00000493467 ATF7IPQ6VMQ6 1270 aa12.28□□□□□ -0.44
TSC1-207ENST00000493467 FOXD4L4Q8WXT5 416 aaPredicted RBP12.28□□□□□ -0.44
TSC1-207ENST00000493467 PRAM1Q96QH2 718 aa12.28□□□□□ -0.44
TSC1-207ENST00000493467 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
TSC1-207ENST00000493467 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.44
TSC1-207ENST00000493467 DIAPH1O60610 1272 aaKnown RBP12.27□□□□□ -0.44
TSC1-207ENST00000493467 PPP1R37O75864 691 aa12.27□□□□□ -0.44
TSC1-207ENST00000493467 SAFB2Q14151 953 aaKnown RBP eCLIP12.27□□□□□ -0.44
TSC1-207ENST00000493467 ALDH1L2Q3SY69 923 aa12.27□□□□□ -0.44
TSC1-207ENST00000493467 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.44
TSC1-207ENST00000493467 MINK1Q8N4C8 1332 aaPredicted RBP12.27□□□□□ -0.45
TSC1-207ENST00000493467 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
TSC1-207ENST00000493467 STK26Q9P289 416 aa12.27□□□□□ -0.45
TSC1-207ENST00000493467 FLIIQ13045 1269 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 KNDC1Q76NI1 1749 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 POGKQ9P215 609 aa12.26□□□□□ -0.45
TSC1-207ENST00000493467 FCHSD2O94868 740 aa12.25□□□□□ -0.45
TSC1-207ENST00000493467 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
TSC1-207ENST00000493467 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
TSC1-207ENST00000493467 RIPK4P57078 832 aa12.25□□□□□ -0.45
TSC1-207ENST00000493467 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
TSC1-207ENST00000493467 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 IPO8O15397 1037 aaKnown RBP12.24□□□□□ -0.45
TSC1-207ENST00000493467 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 ZBTB40Q9NUA8 1239 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 NRXN3Q9Y4C0 1643 aa12.24□□□□□ -0.45
TSC1-207ENST00000493467 ITPRIPQ8IWB1 547 aa12.23□□□□□ -0.45
TSC1-207ENST00000493467 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
TSC1-207ENST00000493467 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
TSC1-207ENST00000493467 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
TSC1-207ENST00000493467 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
TSC1-207ENST00000493467 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
TSC1-207ENST00000493467 CPSF1Q10570 1443 aaKnown RBP12.22□□□□□ -0.45
TSC1-207ENST00000493467 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms