RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
TSC22D4-205ENST00000493217 ACEP12821 1306 aa24.05■■□□□ 1.44
TSC22D4-205ENST00000493217 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
TSC22D4-205ENST00000493217 ZNF853P0CG23 659 aa24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 HDAC1Q13547 482 aaPredicted RBP24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 TMEM57Q8N5G2 664 aa24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 THUMPD2Q9BTF0 503 aaKnown RBP24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 IFT57Q9NWB7 429 aa24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 USP19O94966 1318 aa24.04■■□□□ 1.44
TSC22D4-205ENST00000493217 SLC26A8Q96RN1 970 aa24.03■■□□□ 1.44
TSC22D4-205ENST00000493217 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
TSC22D4-205ENST00000493217 GNAI1P63096 354 aa24.03■■□□□ 1.44
TSC22D4-205ENST00000493217 SLIT1O75093 1534 aa24.02■■□□□ 1.44
TSC22D4-205ENST00000493217 VAMP4O75379 141 aa24.02■■□□□ 1.44
TSC22D4-205ENST00000493217 ZBTB40Q9NUA8 1239 aa24.02■■□□□ 1.44
TSC22D4-205ENST00000493217 ARHGAP23Q9P227 1491 aa24.02■■□□□ 1.44
TSC22D4-205ENST00000493217 OVOS2A0A0J9YW53 1432 aa24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 OVOS2Q6IE36 1432 aa24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 SEC24BO95487 1268 aa24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 USP6P35125 1406 aa24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 LMOD3Q0VAK6 560 aa24.01■■□□□ 1.43
TSC22D4-205ENST00000493217 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
TSC22D4-205ENST00000493217 SLC4A3P48751 1232 aa23.99■■□□□ 1.43
TSC22D4-205ENST00000493217 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
TSC22D4-205ENST00000493217 NUTM2FA1L443 756 aa23.99■■□□□ 1.43
TSC22D4-205ENST00000493217 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
TSC22D4-205ENST00000493217 TSPYL6Q8N831 410 aa23.98■■□□□ 1.43
TSC22D4-205ENST00000493217 CFAP44Q96MT7 982 aa23.98■■□□□ 1.43
TSC22D4-205ENST00000493217 AMOTL2Q9Y2J4 779 aa23.98■■□□□ 1.43
TSC22D4-205ENST00000493217 SSH2Q76I76 1423 aa23.97■■□□□ 1.43
TSC22D4-205ENST00000493217 DEKP35659 375 aaKnown RBP23.97■■□□□ 1.43
TSC22D4-205ENST00000493217 EIF4A2Q14240 407 aaKnown RBP23.97■■□□□ 1.43
TSC22D4-205ENST00000493217 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
TSC22D4-205ENST00000493217 DAXXQ9UER7 740 aaPredicted RBP23.97■■□□□ 1.43
TSC22D4-205ENST00000493217 MRPL50Q8N5N7 158 aaKnown RBP23.96■■□□□ 1.43
TSC22D4-205ENST00000493217 ARHGAP45Q92619 1136 aa23.96■■□□□ 1.43
TSC22D4-205ENST00000493217 SMC5Q8IY18 1101 aa23.96■■□□□ 1.43
TSC22D4-205ENST00000493217 USP31Q70CQ4 1352 aa23.95■■□□□ 1.43
TSC22D4-205ENST00000493217 PTCH1Q13635 1447 aa23.95■■□□□ 1.42
TSC22D4-205ENST00000493217 NALCNQ8IZF0 1738 aa23.94■■□□□ 1.42
TSC22D4-205ENST00000493217 FAM83GA6ND36 823 aa23.94■■□□□ 1.42
TSC22D4-205ENST00000493217 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
TSC22D4-205ENST00000493217 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
TSC22D4-205ENST00000493217 TWISTNBQ3B726 338 aaPredicted RBP23.92■■□□□ 1.42
TSC22D4-205ENST00000493217 SULT6B1Q6IMI4 303 aa23.92■■□□□ 1.42
TSC22D4-205ENST00000493217 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
TSC22D4-205ENST00000493217 ELL2O00472 640 aaPredicted RBP23.91■■□□□ 1.42
TSC22D4-205ENST00000493217 PEAK1Q9H792 1746 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 C8orf58Q8NAV2 365 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 FER1L4A9Z1Z3 1794 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 TTC21AQ8NDW8 1320 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 ZBTB7BO15156 539 aaPredicted RBP23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
TSC22D4-205ENST00000493217 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
TSC22D4-205ENST00000493217 RGPD1P0DJD0 1748 aa23.88■■□□□ 1.41
TSC22D4-205ENST00000493217 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
TSC22D4-205ENST00000493217 CHMP4BQ9H444 224 aaKnown RBP23.87■■□□□ 1.41
TSC22D4-205ENST00000493217 ABCC4O15439 1325 aa23.87■■□□□ 1.41
TSC22D4-205ENST00000493217 UPF2Q9HAU5 1272 aaKnown RBP23.86■■□□□ 1.41
TSC22D4-205ENST00000493217 TBC1D32Q96NH3 1257 aa23.85■■□□□ 1.41
TSC22D4-205ENST00000493217 NUCB1Q02818 461 aa23.85■■□□□ 1.41
TSC22D4-205ENST00000493217 MAP3K19Q56UN5 1328 aa23.83■■□□□ 1.41
TSC22D4-205ENST00000493217 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.4
TSC22D4-205ENST00000493217 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.4
TSC22D4-205ENST00000493217 CHL1O00533 1208 aa23.82■■□□□ 1.4
TSC22D4-205ENST00000493217 NGDNQ8NEJ9 315 aaKnown RBP23.82■■□□□ 1.4
TSC22D4-205ENST00000493217 SOX12O15370 315 aa23.81■■□□□ 1.4
TSC22D4-205ENST00000493217 NFKBIBQ15653 356 aa23.81■■□□□ 1.4
TSC22D4-205ENST00000493217 API5Q9BZZ5 524 aaKnown RBP23.81■■□□□ 1.4
TSC22D4-205ENST00000493217 ARHGEF10O15013 1369 aa23.81■■□□□ 1.4
TSC22D4-205ENST00000493217 SBNO1A3KN83 1393 aa23.8■■□□□ 1.4
TSC22D4-205ENST00000493217 FLT4P35916 1363 aa23.8■■□□□ 1.4
TSC22D4-205ENST00000493217 MCM10Q7L590 875 aa23.8■■□□□ 1.4
TSC22D4-205ENST00000493217 BECN1Q14457 450 aa23.79■■□□□ 1.4
TSC22D4-205ENST00000493217 CHD1LQ86WJ1 897 aa23.79■■□□□ 1.4
TSC22D4-205ENST00000493217 HAP1P54257 671 aaPredicted RBP23.78■■□□□ 1.4
TSC22D4-205ENST00000493217 GCC1Q96CN9 775 aa23.78■■□□□ 1.4
TSC22D4-205ENST00000493217 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
TSC22D4-205ENST00000493217 ANKARQ7Z5J8 1434 aa23.78■■□□□ 1.4
TSC22D4-205ENST00000493217 KIAA0232Q92628 1395 aa23.78■■□□□ 1.4
TSC22D4-205ENST00000493217 KCNA6P17658 529 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 FMN2Q9NZ56 1722 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 KDRP35968 1356 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 LNPKQ9C0E8 428 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 C1orf115Q9H7X2 142 aa23.77■■□□□ 1.4
TSC22D4-205ENST00000493217 KIF24Q5T7B8 1368 aa23.77■■□□□ 1.39
TSC22D4-205ENST00000493217 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
TSC22D4-205ENST00000493217 CRB1P82279 1406 aa23.76■■□□□ 1.39
TSC22D4-205ENST00000493217 KRT24Q2M2I5 525 aa23.75■■□□□ 1.39
TSC22D4-205ENST00000493217 IGSF1Q8N6C5 1336 aa23.73■■□□□ 1.39
TSC22D4-205ENST00000493217 MTHFSDQ2M296 383 aaKnown RBP23.73■■□□□ 1.39
TSC22D4-205ENST00000493217 CEP170BQ9Y4F5 1589 aaPredicted RBP23.73■■□□□ 1.39
TSC22D4-205ENST00000493217 AMPHP49418 695 aa23.72■■□□□ 1.39
TSC22D4-205ENST00000493217 NLRP6P59044 892 aa23.72■■□□□ 1.39
TSC22D4-205ENST00000493217 INTS3Q68E01 1043 aaKnown RBP23.72■■□□□ 1.39
TSC22D4-205ENST00000493217 EYA1Q99502 592 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms