RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 NME9Q86XW9 330 aa26.17■■□□□ 1.78
CHD1L-209ENST00000492728 A0A1W2PP64 1363 aa26.17■■□□□ 1.78
CHD1L-209ENST00000492728 USP31Q70CQ4 1352 aa26.17■■□□□ 1.78
CHD1L-209ENST00000492728 PEAK1Q9H792 1746 aa26.17■■□□□ 1.78
CHD1L-209ENST00000492728 WDR17Q8IZU2 1322 aa26.16■■□□□ 1.78
CHD1L-209ENST00000492728 PDE3BQ13370 1112 aa26.16■■□□□ 1.78
CHD1L-209ENST00000492728 KCNH5Q8NCM2 988 aa26.16■■□□□ 1.78
CHD1L-209ENST00000492728 TMC1Q8TDI8 760 aa26.16■■□□□ 1.78
CHD1L-209ENST00000492728 PSDA5PKW4 1024 aaPredicted RBP26.15■■□□□ 1.78
CHD1L-209ENST00000492728 EZH2Q15910 746 aaKnown RBP26.15■■□□□ 1.78
CHD1L-209ENST00000492728 ST20-MTHFSA0A0A6YYL1 179 aa26.14■■□□□ 1.78
CHD1L-209ENST00000492728 TOM1L2Q6ZVM7 507 aa26.14■■□□□ 1.78
CHD1L-209ENST00000492728 CAMKK2Q96RR4 588 aa26.13■■□□□ 1.77
CHD1L-209ENST00000492728 ABCC6O95255 1503 aa26.13■■□□□ 1.77
CHD1L-209ENST00000492728 EDC4Q6P2E9 1401 aaKnown RBP26.13■■□□□ 1.77
CHD1L-209ENST00000492728 RREB1Q92766 1687 aa26.1■■□□□ 1.77
CHD1L-209ENST00000492728 OVOS2A0A0J9YW53 1432 aa26.1■■□□□ 1.77
CHD1L-209ENST00000492728 OVOS2Q6IE36 1432 aa26.1■■□□□ 1.77
CHD1L-209ENST00000492728 LRP5O75197 1615 aa26.1■■□□□ 1.77
CHD1L-209ENST00000492728 APBA3O96018 575 aa26.09■■□□□ 1.77
CHD1L-209ENST00000492728 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
CHD1L-209ENST00000492728 PUS7Q96PZ0 661 aaKnown RBP26.09■■□□□ 1.77
CHD1L-209ENST00000492728 OVOS2A0A0G2JMS6 1433 aa26.08■■□□□ 1.77
CHD1L-209ENST00000492728 LTN1O94822 1766 aa26.07■■□□□ 1.76
CHD1L-209ENST00000492728 NUP188Q5SRE5 1749 aa26.07■■□□□ 1.76
CHD1L-209ENST00000492728 CARD10Q9BWT7 1032 aa26.06■■□□□ 1.76
CHD1L-209ENST00000492728 USP47Q96K76 1375 aa26.06■■□□□ 1.76
CHD1L-209ENST00000492728 CSB-PGBD3P0DP91 1061 aa26.05■■□□□ 1.76
CHD1L-209ENST00000492728 R3HDM1Q15032 1099 aaKnown RBP26.05■■□□□ 1.76
CHD1L-209ENST00000492728 DDB1Q16531 1140 aa26.05■■□□□ 1.76
CHD1L-209ENST00000492728 TERF2IPQ9NYB0 399 aa26.04■■□□□ 1.76
CHD1L-209ENST00000492728 PARD3Q8TEW0 1356 aa26.04■■□□□ 1.76
CHD1L-209ENST00000492728 SBF2Q86WG5 1849 aa26.03■■□□□ 1.76
CHD1L-209ENST00000492728 PTF1AQ7RTS3 328 aa26.03■■□□□ 1.76
CHD1L-209ENST00000492728 MARCH10Q8NA82 808 aaPredicted RBP26.03■■□□□ 1.76
CHD1L-209ENST00000492728 ERBB3P21860 1342 aa26.03■■□□□ 1.76
CHD1L-209ENST00000492728 NINLQ9Y2I6 1382 aa26.03■■□□□ 1.76
CHD1L-209ENST00000492728 CCDC7Q96M83 1385 aa25.99■■□□□ 1.75
CHD1L-209ENST00000492728 TNS2Q63HR2 1409 aa25.98■■□□□ 1.75
CHD1L-209ENST00000492728 BCL9O00512 1426 aa25.97■■□□□ 1.75
CHD1L-209ENST00000492728 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
CHD1L-209ENST00000492728 CDCA7Q9BWT1 371 aaPredicted RBP25.97■■□□□ 1.75
CHD1L-209ENST00000492728 RGPD3A6NKT7 1758 aaPredicted RBP25.95■■□□□ 1.75
CHD1L-209ENST00000492728 RGPD4Q7Z3J3 1758 aa25.95■■□□□ 1.75
CHD1L-209ENST00000492728 ANKRD24Q8TF21 1146 aa25.95■■□□□ 1.74
CHD1L-209ENST00000492728 C11orf95C9JLR9 678 aaPredicted RBP25.93■■□□□ 1.74
CHD1L-209ENST00000492728 FBLN1P23142 703 aa25.93■■□□□ 1.74
CHD1L-209ENST00000492728 NLRP2Q9NX02 1062 aa25.93■■□□□ 1.74
CHD1L-209ENST00000492728 MYOM1P52179 1685 aa25.91■■□□□ 1.74
CHD1L-209ENST00000492728 TMF1P82094 1093 aa25.91■■□□□ 1.74
CHD1L-209ENST00000492728 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
CHD1L-209ENST00000492728 BCL11BQ9C0K0 894 aaPredicted RBP25.91■■□□□ 1.74
CHD1L-209ENST00000492728 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
CHD1L-209ENST00000492728 EXOC5O00471 708 aa25.89■■□□□ 1.74
CHD1L-209ENST00000492728 SLC24A1O60721 1099 aa25.89■■□□□ 1.74
CHD1L-209ENST00000492728 IP6K1Q92551 441 aa25.89■■□□□ 1.74
CHD1L-209ENST00000492728 COG3Q96JB2 828 aa25.88■■□□□ 1.73
CHD1L-209ENST00000492728 PLSCR1O15162 318 aa25.87■■□□□ 1.73
CHD1L-209ENST00000492728 ANO8Q9HCE9 1232 aaPredicted RBP25.87■■□□□ 1.73
CHD1L-209ENST00000492728 NHSQ6T4R5 1651 aa25.87■■□□□ 1.73
CHD1L-209ENST00000492728 IL2RBP14784 551 aa25.86■■□□□ 1.73
CHD1L-209ENST00000492728 PROM2Q8N271 834 aa25.86■■□□□ 1.73
CHD1L-209ENST00000492728 FAM208AQ9UK61 1670 aaKnown RBP25.86■■□□□ 1.73
CHD1L-209ENST00000492728 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
CHD1L-209ENST00000492728 FYB1O15117 783 aa25.85■■□□□ 1.73
CHD1L-209ENST00000492728 KCNQ2O43526 872 aa25.85■■□□□ 1.73
CHD1L-209ENST00000492728 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
CHD1L-209ENST00000492728 HOXC9P31274 260 aa25.84■■□□□ 1.73
CHD1L-209ENST00000492728 GGNBP2Q9H3C7 697 aa25.84■■□□□ 1.73
CHD1L-209ENST00000492728 TIMELESSQ9UNS1 1208 aa25.84■■□□□ 1.73
CHD1L-209ENST00000492728 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
CHD1L-209ENST00000492728 KIF20BQ96Q89 1820 aa25.82■■□□□ 1.72
CHD1L-209ENST00000492728 RRS1Q15050 365 aaKnown RBP25.82■■□□□ 1.72
CHD1L-209ENST00000492728 RGPD2P0DJD1 1756 aa25.82■■□□□ 1.72
CHD1L-209ENST00000492728 ACSBG1Q96GR2 724 aa25.81■■□□□ 1.72
CHD1L-209ENST00000492728 CARD14Q9BXL6 1004 aa25.8■■□□□ 1.72
CHD1L-209ENST00000492728 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
CHD1L-209ENST00000492728 CASZ1Q86V15 1759 aa25.78■■□□□ 1.72
CHD1L-209ENST00000492728 AMPHP49418 695 aa25.78■■□□□ 1.72
CHD1L-209ENST00000492728 NSD3Q9BZ95 1437 aa25.78■■□□□ 1.72
CHD1L-209ENST00000492728 MEGF6O75095 1541 aa25.78■■□□□ 1.72
CHD1L-209ENST00000492728 SHANK3Q9BYB0 1731 aa25.77■■□□□ 1.72
CHD1L-209ENST00000492728 TXNRD1Q16881 649 aa25.76■■□□□ 1.71
CHD1L-209ENST00000492728 CDCA8Q53HL2 280 aa25.76■■□□□ 1.71
CHD1L-209ENST00000492728 PDGFDQ9GZP0 370 aaPredicted RBP25.76■■□□□ 1.71
CHD1L-209ENST00000492728 BTAF1O14981 1849 aa25.75■■□□□ 1.71
CHD1L-209ENST00000492728 PAPPAQ13219 1627 aa25.74■■□□□ 1.71
CHD1L-209ENST00000492728 NBPF6Q5VWK0 638 aa25.71■■□□□ 1.71
CHD1L-209ENST00000492728 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
CHD1L-209ENST00000492728 DDX54Q8TDD1 881 aaKnown RBP25.71■■□□□ 1.71
CHD1L-209ENST00000492728 NBPF4Q96M43 638 aa25.71■■□□□ 1.71
CHD1L-209ENST00000492728 DOT1LQ8TEK3 1739 aa25.69■■□□□ 1.7
CHD1L-209ENST00000492728 HSP90AB2PQ58FF8 381 aa25.69■■□□□ 1.7
CHD1L-209ENST00000492728 INSRP06213 1382 aa25.68■■□□□ 1.7
CHD1L-209ENST00000492728 SPON1Q9HCB6 807 aa25.67■■□□□ 1.7
CHD1L-209ENST00000492728 EMILIN1Q9Y6C2 1016 aa25.67■■□□□ 1.7
CHD1L-209ENST00000492728 FLT4P35916 1363 aa25.67■■□□□ 1.7
CHD1L-209ENST00000492728 ANKRD26Q9UPS8 1709 aa25.66■■□□□ 1.7
CHD1L-209ENST00000492728 NSD2O96028 1365 aa25.66■■□□□ 1.7
CHD1L-209ENST00000492728 CCER1Q8TC90 406 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms