RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 MAPK8IP3Q9UPT6 1336 aa19.76■□□□□ 0.75
TMEM50A-205ENST00000491936 IL13P35225 146 aa19.76■□□□□ 0.75
TMEM50A-205ENST00000491936 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
TMEM50A-205ENST00000491936 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
TMEM50A-205ENST00000491936 PHF8Q9UPP1 1060 aa19.76■□□□□ 0.75
TMEM50A-205ENST00000491936 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
TMEM50A-205ENST00000491936 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
TMEM50A-205ENST00000491936 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
TMEM50A-205ENST00000491936 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
TMEM50A-205ENST00000491936 EMILIN1Q9Y6C2 1016 aa19.73■□□□□ 0.75
TMEM50A-205ENST00000491936 MAP2P11137 1827 aaKnown RBP19.73■□□□□ 0.75
TMEM50A-205ENST00000491936 IL16Q14005 1332 aa19.73■□□□□ 0.75
TMEM50A-205ENST00000491936 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
TMEM50A-205ENST00000491936 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
TMEM50A-205ENST00000491936 LRP6O75581 1613 aa19.72■□□□□ 0.75
TMEM50A-205ENST00000491936 USP54Q70EL1 1684 aa19.71■□□□□ 0.75
TMEM50A-205ENST00000491936 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
TMEM50A-205ENST00000491936 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
TMEM50A-205ENST00000491936 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
TMEM50A-205ENST00000491936 DDX17Q92841 729 aaKnown RBP19.69■□□□□ 0.74
TMEM50A-205ENST00000491936 RGPD8O14715 1765 aaPredicted RBP19.69■□□□□ 0.74
TMEM50A-205ENST00000491936 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
TMEM50A-205ENST00000491936 CT47B1P0C2W7 299 aaPredicted RBP19.68■□□□□ 0.74
TMEM50A-205ENST00000491936 SBNO1A3KN83 1393 aa19.68■□□□□ 0.74
TMEM50A-205ENST00000491936 KCNA4P22459 653 aa19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 FBLN1P23142 703 aa19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 NLRP6P59044 892 aa19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 CALD1Q05682 793 aaKnown RBP19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 RRS1Q15050 365 aaKnown RBP19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
TMEM50A-205ENST00000491936 PSME1Q06323 249 aa19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 ESCO1Q5FWF5 840 aa19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 POTEAQ6S8J7 498 aa19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
TMEM50A-205ENST00000491936 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
TMEM50A-205ENST00000491936 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
TMEM50A-205ENST00000491936 FLT4P35916 1363 aa19.65■□□□□ 0.74
TMEM50A-205ENST00000491936 RIPK4P57078 832 aa19.64■□□□□ 0.73
TMEM50A-205ENST00000491936 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
TMEM50A-205ENST00000491936 NFE2L2Q16236 605 aa19.64■□□□□ 0.73
TMEM50A-205ENST00000491936 PIK3C2AO00443 1686 aa19.64■□□□□ 0.73
TMEM50A-205ENST00000491936 MAP3K19Q56UN5 1328 aa19.63■□□□□ 0.73
TMEM50A-205ENST00000491936 EIF4A2Q14240 407 aaKnown RBP19.63■□□□□ 0.73
TMEM50A-205ENST00000491936 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
TMEM50A-205ENST00000491936 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
TMEM50A-205ENST00000491936 KCNH5Q8NCM2 988 aa19.62■□□□□ 0.73
TMEM50A-205ENST00000491936 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
TMEM50A-205ENST00000491936 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
TMEM50A-205ENST00000491936 SOS2Q07890 1332 aaPredicted RBP19.61■□□□□ 0.73
TMEM50A-205ENST00000491936 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
TMEM50A-205ENST00000491936 ARHGEF10O15013 1369 aa19.6■□□□□ 0.73
TMEM50A-205ENST00000491936 PAK3O75914 559 aaPredicted RBP19.59■□□□□ 0.73
TMEM50A-205ENST00000491936 AMPHP49418 695 aa19.59■□□□□ 0.73
TMEM50A-205ENST00000491936 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
TMEM50A-205ENST00000491936 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
TMEM50A-205ENST00000491936 HMOX1P09601 288 aa19.58■□□□□ 0.72
TMEM50A-205ENST00000491936 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.72
TMEM50A-205ENST00000491936 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
TMEM50A-205ENST00000491936 HSP90AB2PQ58FF8 381 aa19.57■□□□□ 0.72
TMEM50A-205ENST00000491936 PEAK1Q9H792 1746 aa19.56■□□□□ 0.72
TMEM50A-205ENST00000491936 ZNF428Q96B54 188 aa19.56■□□□□ 0.72
TMEM50A-205ENST00000491936 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
TMEM50A-205ENST00000491936 PHACTR3Q96KR7 559 aa19.56■□□□□ 0.72
TMEM50A-205ENST00000491936 PXDNQ92626 1479 aa19.55■□□□□ 0.72
TMEM50A-205ENST00000491936 RGPD1P0DJD0 1748 aa19.55■□□□□ 0.72
TMEM50A-205ENST00000491936 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
TMEM50A-205ENST00000491936 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
TMEM50A-205ENST00000491936 HOXC9P31274 260 aa19.54■□□□□ 0.72
TMEM50A-205ENST00000491936 KRT28Q7Z3Y7 464 aa19.54■□□□□ 0.72
TMEM50A-205ENST00000491936 KDRP35968 1356 aa19.54■□□□□ 0.72
TMEM50A-205ENST00000491936 IGSF1Q8N6C5 1336 aa19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 FOXO3O43524 673 aa19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 AAMPQ13685 434 aa19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 IP6K1Q92551 441 aa19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 MARF1Q9Y4F3 1742 aaKnown RBP19.53■□□□□ 0.72
TMEM50A-205ENST00000491936 NPHP3Q7Z494 1330 aa19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 GNAI1P63096 354 aa19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 ZNF772Q68DY9 489 aaPredicted RBP19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 EXOC6Q8TAG9 804 aa19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 IFT57Q9NWB7 429 aa19.52■□□□□ 0.72
TMEM50A-205ENST00000491936 B4GALNT3Q6L9W6 998 aa19.51■□□□□ 0.71
TMEM50A-205ENST00000491936 SLIT3O75094 1523 aa19.51■□□□□ 0.71
TMEM50A-205ENST00000491936 PLIN1O60240 522 aa19.5■□□□□ 0.71
TMEM50A-205ENST00000491936 MS4A1P11836 297 aa19.5■□□□□ 0.71
TMEM50A-205ENST00000491936 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
TMEM50A-205ENST00000491936 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
TMEM50A-205ENST00000491936 USP19O94966 1318 aa19.5■□□□□ 0.71
TMEM50A-205ENST00000491936 SOX12O15370 315 aa19.49■□□□□ 0.71
TMEM50A-205ENST00000491936 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
TMEM50A-205ENST00000491936 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
TMEM50A-205ENST00000491936 NFAT5O94916 1531 aa19.49■□□□□ 0.71
TMEM50A-205ENST00000491936 AFF2P51816 1311 aa19.49■□□□□ 0.71
TMEM50A-205ENST00000491936 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
TMEM50A-205ENST00000491936 EYA1Q99502 592 aa19.48■□□□□ 0.71
TMEM50A-205ENST00000491936 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms