RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.45
SEC61A1-206ENST00000491668 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
SEC61A1-206ENST00000491668 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
SEC61A1-206ENST00000491668 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
SEC61A1-206ENST00000491668 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
SEC61A1-206ENST00000491668 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
SEC61A1-206ENST00000491668 WDR17Q8IZU2 1322 aa17.87■□□□□ 0.45
SEC61A1-206ENST00000491668 SF3B2Q13435 895 aaKnown RBP17.86■□□□□ 0.45
SEC61A1-206ENST00000491668 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
SEC61A1-206ENST00000491668 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
SEC61A1-206ENST00000491668 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
SEC61A1-206ENST00000491668 FAM196AQ6ZSG2 479 aa17.85■□□□□ 0.45
SEC61A1-206ENST00000491668 NINLQ9Y2I6 1382 aa17.85■□□□□ 0.45
SEC61A1-206ENST00000491668 LRRC37A3O60309 1634 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 ABCC6O95255 1503 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 DISP2A7MBM2 1401 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 TRIM37O94972 964 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 WNK3Q9BYP7 1800 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
SEC61A1-206ENST00000491668 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
SEC61A1-206ENST00000491668 LTN1O94822 1766 aa17.82■□□□□ 0.44
SEC61A1-206ENST00000491668 BAG6P46379 1132 aa17.82■□□□□ 0.44
SEC61A1-206ENST00000491668 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
SEC61A1-206ENST00000491668 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
SEC61A1-206ENST00000491668 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
SEC61A1-206ENST00000491668 TMF1P82094 1093 aa17.8■□□□□ 0.44
SEC61A1-206ENST00000491668 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
SEC61A1-206ENST00000491668 CAMKK2Q96RR4 588 aa17.79■□□□□ 0.44
SEC61A1-206ENST00000491668 ERBB3P21860 1342 aa17.78■□□□□ 0.44
SEC61A1-206ENST00000491668 CSB-PGBD3P0DP91 1061 aa17.78■□□□□ 0.44
SEC61A1-206ENST00000491668 FBLN1P23142 703 aa17.78■□□□□ 0.44
SEC61A1-206ENST00000491668 DDB1Q16531 1140 aa17.77■□□□□ 0.44
SEC61A1-206ENST00000491668 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
SEC61A1-206ENST00000491668 MYOM1P52179 1685 aa17.77■□□□□ 0.43
SEC61A1-206ENST00000491668 APBA3O96018 575 aa17.76■□□□□ 0.43
SEC61A1-206ENST00000491668 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
SEC61A1-206ENST00000491668 SBF2Q86WG5 1849 aa17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 PSDA5PKW4 1024 aaPredicted RBP17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 FYB1O15117 783 aa17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
SEC61A1-206ENST00000491668 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
SEC61A1-206ENST00000491668 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
SEC61A1-206ENST00000491668 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
SEC61A1-206ENST00000491668 IP6K1Q92551 441 aa17.73■□□□□ 0.43
SEC61A1-206ENST00000491668 COG3Q96JB2 828 aa17.73■□□□□ 0.43
SEC61A1-206ENST00000491668 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
SEC61A1-206ENST00000491668 RREB1Q92766 1687 aa17.73■□□□□ 0.43
SEC61A1-206ENST00000491668 BCL9O00512 1426 aa17.72■□□□□ 0.43
SEC61A1-206ENST00000491668 GGNBP2Q9H3C7 697 aa17.72■□□□□ 0.43
SEC61A1-206ENST00000491668 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
SEC61A1-206ENST00000491668 CDCA8Q53HL2 280 aa17.71■□□□□ 0.43
SEC61A1-206ENST00000491668 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
SEC61A1-206ENST00000491668 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
SEC61A1-206ENST00000491668 HOXC9P31274 260 aa17.7■□□□□ 0.42
SEC61A1-206ENST00000491668 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
SEC61A1-206ENST00000491668 EXOC5O00471 708 aa17.69■□□□□ 0.42
SEC61A1-206ENST00000491668 R3HDM1Q15032 1099 aaKnown RBP17.69■□□□□ 0.42
SEC61A1-206ENST00000491668 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
SEC61A1-206ENST00000491668 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
SEC61A1-206ENST00000491668 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
SEC61A1-206ENST00000491668 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
SEC61A1-206ENST00000491668 IL2RBP14784 551 aa17.67■□□□□ 0.42
SEC61A1-206ENST00000491668 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
SEC61A1-206ENST00000491668 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 LRP5O75197 1615 aa17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 HSPA5P11021 654 aaKnown RBP17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 RGPD3A6NKT7 1758 aaPredicted RBP17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
SEC61A1-206ENST00000491668 PLSCR1O15162 318 aa17.65■□□□□ 0.42
SEC61A1-206ENST00000491668 PROM2Q8N271 834 aa17.65■□□□□ 0.42
SEC61A1-206ENST00000491668 KCNQ2O43526 872 aa17.64■□□□□ 0.41
SEC61A1-206ENST00000491668 AMPHP49418 695 aa17.64■□□□□ 0.41
SEC61A1-206ENST00000491668 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
SEC61A1-206ENST00000491668 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC61A1-206ENST00000491668 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
SEC61A1-206ENST00000491668 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
SEC61A1-206ENST00000491668 NHSQ6T4R5 1651 aa17.61■□□□□ 0.41
SEC61A1-206ENST00000491668 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
SEC61A1-206ENST00000491668 MEGF6O75095 1541 aa17.61■□□□□ 0.41
SEC61A1-206ENST00000491668 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
SEC61A1-206ENST00000491668 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
SEC61A1-206ENST00000491668 INSRP06213 1382 aa17.59■□□□□ 0.41
SEC61A1-206ENST00000491668 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
SEC61A1-206ENST00000491668 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
SEC61A1-206ENST00000491668 ANO8Q9HCE9 1232 aaPredicted RBP17.59■□□□□ 0.41
SEC61A1-206ENST00000491668 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
SEC61A1-206ENST00000491668 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.4
SEC61A1-206ENST00000491668 ANKRD26Q9UPS8 1709 aa17.58■□□□□ 0.4
SEC61A1-206ENST00000491668 FLT4P35916 1363 aa17.57■□□□□ 0.4
SEC61A1-206ENST00000491668 KIF24Q5T7B8 1368 aa17.57■□□□□ 0.4
SEC61A1-206ENST00000491668 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
SEC61A1-206ENST00000491668 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
SEC61A1-206ENST00000491668 DDX54Q8TDD1 881 aaKnown RBP17.56■□□□□ 0.4
SEC61A1-206ENST00000491668 BTAF1O14981 1849 aa17.56■□□□□ 0.4
SEC61A1-206ENST00000491668 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms