RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
LMNB2-203ENST00000490554 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
LMNB2-203ENST00000490554 CPSF1Q10570 1443 aaKnown RBP22.31■■□□□ 1.16
LMNB2-203ENST00000490554 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
LMNB2-203ENST00000490554 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
LMNB2-203ENST00000490554 ZNF692Q9BU19 519 aaPredicted RBP22.3■■□□□ 1.16
LMNB2-203ENST00000490554 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
LMNB2-203ENST00000490554 BCL9O00512 1426 aa22.3■■□□□ 1.16
LMNB2-203ENST00000490554 KCNH5Q8NCM2 988 aa22.29■■□□□ 1.16
LMNB2-203ENST00000490554 RGPD3A6NKT7 1758 aaPredicted RBP22.28■■□□□ 1.16
LMNB2-203ENST00000490554 RGPD4Q7Z3J3 1758 aa22.28■■□□□ 1.16
LMNB2-203ENST00000490554 YY1P25490 414 aa22.28■■□□□ 1.16
LMNB2-203ENST00000490554 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
LMNB2-203ENST00000490554 PROM2Q8N271 834 aa22.27■■□□□ 1.16
LMNB2-203ENST00000490554 CARD10Q9BWT7 1032 aa22.27■■□□□ 1.16
LMNB2-203ENST00000490554 SBF2Q86WG5 1849 aa22.27■■□□□ 1.15
LMNB2-203ENST00000490554 TTC21AQ8NDW8 1320 aa22.26■■□□□ 1.15
LMNB2-203ENST00000490554 TRPM1Q7Z4N2 1603 aa22.25■■□□□ 1.15
LMNB2-203ENST00000490554 SOX12O15370 315 aa22.24■■□□□ 1.15
LMNB2-203ENST00000490554 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
LMNB2-203ENST00000490554 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
LMNB2-203ENST00000490554 WNK3Q9BYP7 1800 aa22.22■■□□□ 1.15
LMNB2-203ENST00000490554 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
LMNB2-203ENST00000490554 PDGFDQ9GZP0 370 aaPredicted RBP22.22■■□□□ 1.15
LMNB2-203ENST00000490554 EXOC5O00471 708 aa22.21■■□□□ 1.15
LMNB2-203ENST00000490554 NFAT5O94916 1531 aa22.21■■□□□ 1.15
LMNB2-203ENST00000490554 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
LMNB2-203ENST00000490554 KTN1Q86UP2 1357 aaKnown RBP22.2■■□□□ 1.14
LMNB2-203ENST00000490554 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
LMNB2-203ENST00000490554 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
LMNB2-203ENST00000490554 TXNRD1Q16881 649 aa22.19■■□□□ 1.14
LMNB2-203ENST00000490554 AKAP12Q02952 1782 aa22.19■■□□□ 1.14
LMNB2-203ENST00000490554 ZBTB7AO95365 584 aa22.18■■□□□ 1.14
LMNB2-203ENST00000490554 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
LMNB2-203ENST00000490554 ABCC6O95255 1503 aa22.17■■□□□ 1.14
LMNB2-203ENST00000490554 TNS2Q63HR2 1409 aa22.16■■□□□ 1.14
LMNB2-203ENST00000490554 PTGER2P43116 358 aa22.16■■□□□ 1.14
LMNB2-203ENST00000490554 STK32BQ9NY57 414 aa22.16■■□□□ 1.14
LMNB2-203ENST00000490554 USP31Q70CQ4 1352 aa22.15■■□□□ 1.14
LMNB2-203ENST00000490554 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
LMNB2-203ENST00000490554 SLC15A2Q16348 729 aa22.15■■□□□ 1.14
LMNB2-203ENST00000490554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
LMNB2-203ENST00000490554 SBNO2Q9Y2G9 1366 aa22.13■■□□□ 1.13
LMNB2-203ENST00000490554 ERBB3P21860 1342 aa22.13■■□□□ 1.13
LMNB2-203ENST00000490554 ATF5Q9Y2D1 282 aaPredicted RBP22.13■■□□□ 1.13
LMNB2-203ENST00000490554 NME9Q86XW9 330 aa22.11■■□□□ 1.13
LMNB2-203ENST00000490554 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
LMNB2-203ENST00000490554 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
LMNB2-203ENST00000490554 MON2Q7Z3U7 1717 aa22.1■■□□□ 1.13
LMNB2-203ENST00000490554 ACSBG1Q96GR2 724 aa22.1■■□□□ 1.13
LMNB2-203ENST00000490554 IL2RBP14784 551 aa22.09■■□□□ 1.13
LMNB2-203ENST00000490554 MTFR1LQ9H019 292 aa22.09■■□□□ 1.13
LMNB2-203ENST00000490554 MYOM1P52179 1685 aa22.08■■□□□ 1.13
LMNB2-203ENST00000490554 SGIP1Q9BQI5 828 aa22.08■■□□□ 1.13
LMNB2-203ENST00000490554 FHDC1Q9C0D6 1143 aaPredicted RBP22.07■■□□□ 1.12
LMNB2-203ENST00000490554 NHSQ6T4R5 1651 aa22.07■■□□□ 1.12
LMNB2-203ENST00000490554 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
LMNB2-203ENST00000490554 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
LMNB2-203ENST00000490554 SYT17Q9BSW7 474 aa22.06■■□□□ 1.12
LMNB2-203ENST00000490554 HDGFL2Q7Z4V5 671 aaPredicted RBP22.05■■□□□ 1.12
LMNB2-203ENST00000490554 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
LMNB2-203ENST00000490554 CARD11Q9BXL7 1154 aa22.05■■□□□ 1.12
LMNB2-203ENST00000490554 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
LMNB2-203ENST00000490554 EDC4Q6P2E9 1401 aaKnown RBP22.03■■□□□ 1.12
LMNB2-203ENST00000490554 PAPPAQ13219 1627 aa22.02■■□□□ 1.11
LMNB2-203ENST00000490554 ZNF827Q17R98 1081 aa22■■□□□ 1.11
LMNB2-203ENST00000490554 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
LMNB2-203ENST00000490554 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
LMNB2-203ENST00000490554 TERF2IPQ9NYB0 399 aa22■■□□□ 1.11
LMNB2-203ENST00000490554 A0A1W2PP64 1363 aa21.99■■□□□ 1.11
LMNB2-203ENST00000490554 LTN1O94822 1766 aa21.99■■□□□ 1.11
LMNB2-203ENST00000490554 ZNF784Q8NCA9 323 aaPredicted RBP21.99■■□□□ 1.11
LMNB2-203ENST00000490554 IP6K1Q92551 441 aa21.99■■□□□ 1.11
LMNB2-203ENST00000490554 ARXQ96QS3 562 aa21.99■■□□□ 1.11
LMNB2-203ENST00000490554 BTAF1O14981 1849 aa21.97■■□□□ 1.11
LMNB2-203ENST00000490554 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
LMNB2-203ENST00000490554 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
LMNB2-203ENST00000490554 AKT1S1Q96B36 256 aa21.95■■□□□ 1.1
LMNB2-203ENST00000490554 UTRNP46939 3433 aa21.95■■□□□ 1.1
LMNB2-203ENST00000490554 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
LMNB2-203ENST00000490554 LTV1Q96GA3 475 aaPredicted RBP21.93■■□□□ 1.1
LMNB2-203ENST00000490554 SLC16A10Q8TF71 515 aa21.92■■□□□ 1.1
LMNB2-203ENST00000490554 MAP3K19Q56UN5 1328 aa21.9■■□□□ 1.1
LMNB2-203ENST00000490554 TESK2Q96S53 571 aa21.9■■□□□ 1.1
LMNB2-203ENST00000490554 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.1
LMNB2-203ENST00000490554 PNPLA7Q6ZV29 1317 aa21.89■■□□□ 1.1
LMNB2-203ENST00000490554 HOXC9P31274 260 aa21.89■■□□□ 1.09
LMNB2-203ENST00000490554 PRIM1P49642 420 aaKnown RBP21.89■■□□□ 1.09
LMNB2-203ENST00000490554 COG3Q96JB2 828 aa21.89■■□□□ 1.09
LMNB2-203ENST00000490554 ANKRD36BQ8N2N9 1353 aa21.88■■□□□ 1.09
LMNB2-203ENST00000490554 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
LMNB2-203ENST00000490554 FBLN1P23142 703 aa21.87■■□□□ 1.09
LMNB2-203ENST00000490554 AMPHP49418 695 aa21.87■■□□□ 1.09
LMNB2-203ENST00000490554 KCNQ4P56696 695 aa21.87■■□□□ 1.09
LMNB2-203ENST00000490554 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
LMNB2-203ENST00000490554 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
LMNB2-203ENST00000490554 ST20-MTHFSA0A0A6YYL1 179 aa21.86■■□□□ 1.09
LMNB2-203ENST00000490554 POLD1P28340 1107 aa21.86■■□□□ 1.09
LMNB2-203ENST00000490554 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
LMNB2-203ENST00000490554 TFCP2L1Q9NZI6 479 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms