RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CRB1P82279 1406 aa24.84■■□□□ 1.57
ABCF3-217ENST00000489719 FAM196AQ6ZSG2 479 aa24.83■■□□□ 1.57
ABCF3-217ENST00000489719 COG3Q96JB2 828 aa24.83■■□□□ 1.57
ABCF3-217ENST00000489719 WDR17Q8IZU2 1322 aa24.83■■□□□ 1.56
ABCF3-217ENST00000489719 DEFB132Q7Z7B7 95 aa24.82■■□□□ 1.56
ABCF3-217ENST00000489719 ANKRD36BQ8N2N9 1353 aa24.81■■□□□ 1.56
ABCF3-217ENST00000489719 EIF4G2P78344 907 aaKnown RBP eCLIP24.81■■□□□ 1.56
ABCF3-217ENST00000489719 LMO7Q8WWI1 1683 aa24.81■■□□□ 1.56
ABCF3-217ENST00000489719 BRWD3Q6RI45 1802 aa24.8■■□□□ 1.56
ABCF3-217ENST00000489719 BAG6P46379 1132 aa24.8■■□□□ 1.56
ABCF3-217ENST00000489719 CARD10Q9BWT7 1032 aa24.79■■□□□ 1.56
ABCF3-217ENST00000489719 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
ABCF3-217ENST00000489719 POLR3GLQ9BT43 218 aa24.78■■□□□ 1.56
ABCF3-217ENST00000489719 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
ABCF3-217ENST00000489719 EP400Q96L91 3159 aa24.76■■□□□ 1.55
ABCF3-217ENST00000489719 DDB1Q16531 1140 aa24.76■■□□□ 1.55
ABCF3-217ENST00000489719 FYB1O15117 783 aa24.75■■□□□ 1.55
ABCF3-217ENST00000489719 TRIM37O94972 964 aa24.75■■□□□ 1.55
ABCF3-217ENST00000489719 NFAT5O94916 1531 aa24.75■■□□□ 1.55
ABCF3-217ENST00000489719 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
ABCF3-217ENST00000489719 C11orf95C9JLR9 678 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-217ENST00000489719 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
ABCF3-217ENST00000489719 NLRP2Q9NX02 1062 aa24.74■■□□□ 1.55
ABCF3-217ENST00000489719 IP6K1Q92551 441 aa24.73■■□□□ 1.55
ABCF3-217ENST00000489719 GGNBP2Q9H3C7 697 aa24.73■■□□□ 1.55
ABCF3-217ENST00000489719 ANKRD24Q8TF21 1146 aa24.72■■□□□ 1.55
ABCF3-217ENST00000489719 OVOS2A0A0J9YW53 1432 aa24.71■■□□□ 1.55
ABCF3-217ENST00000489719 OVOS2Q6IE36 1432 aa24.71■■□□□ 1.55
ABCF3-217ENST00000489719 EXOC5O00471 708 aa24.71■■□□□ 1.55
ABCF3-217ENST00000489719 AMPHP49418 695 aa24.71■■□□□ 1.55
ABCF3-217ENST00000489719 COL18A1P39060 1754 aa24.7■■□□□ 1.55
ABCF3-217ENST00000489719 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
ABCF3-217ENST00000489719 CCDC7Q96M83 1385 aa24.69■■□□□ 1.54
ABCF3-217ENST00000489719 ERBB3P21860 1342 aa24.69■■□□□ 1.54
ABCF3-217ENST00000489719 APBA3O96018 575 aa24.69■■□□□ 1.54
ABCF3-217ENST00000489719 FBLN1P23142 703 aa24.69■■□□□ 1.54
ABCF3-217ENST00000489719 CARD14Q9BXL6 1004 aa24.69■■□□□ 1.54
ABCF3-217ENST00000489719 LTV1Q96GA3 475 aaPredicted RBP24.68■■□□□ 1.54
ABCF3-217ENST00000489719 MAP3K19Q56UN5 1328 aa24.66■■□□□ 1.54
ABCF3-217ENST00000489719 ABCC6O95255 1503 aa24.66■■□□□ 1.54
ABCF3-217ENST00000489719 HOXC9P31274 260 aa24.64■■□□□ 1.54
ABCF3-217ENST00000489719 RRS1Q15050 365 aaKnown RBP24.64■■□□□ 1.54
ABCF3-217ENST00000489719 IL2RBP14784 551 aa24.63■■□□□ 1.53
ABCF3-217ENST00000489719 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
ABCF3-217ENST00000489719 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
ABCF3-217ENST00000489719 EZH2Q15910 746 aaKnown RBP24.62■■□□□ 1.53
ABCF3-217ENST00000489719 CAMKK2Q96RR4 588 aa24.61■■□□□ 1.53
ABCF3-217ENST00000489719 OVOS2A0A0G2JMS6 1433 aa24.61■■□□□ 1.53
ABCF3-217ENST00000489719 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
ABCF3-217ENST00000489719 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
ABCF3-217ENST00000489719 PANK3Q9H999 370 aa24.58■■□□□ 1.53
ABCF3-217ENST00000489719 BCL11BQ9C0K0 894 aaPredicted RBP24.57■■□□□ 1.52
ABCF3-217ENST00000489719 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
ABCF3-217ENST00000489719 RGPD5Q99666 1765 aa24.57■■□□□ 1.52
ABCF3-217ENST00000489719 PARP4Q9UKK3 1724 aaKnown RBP24.56■■□□□ 1.52
ABCF3-217ENST00000489719 RGPD1P0DJD0 1748 aa24.54■■□□□ 1.52
ABCF3-217ENST00000489719 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
ABCF3-217ENST00000489719 PARD3Q8TEW0 1356 aa24.54■■□□□ 1.52
ABCF3-217ENST00000489719 PPM1GO15355 546 aaPredicted RBP24.53■■□□□ 1.52
ABCF3-217ENST00000489719 HSP90AB2PQ58FF8 381 aa24.53■■□□□ 1.52
ABCF3-217ENST00000489719 PSDA5PKW4 1024 aaPredicted RBP24.52■■□□□ 1.52
ABCF3-217ENST00000489719 LTN1O94822 1766 aa24.52■■□□□ 1.52
ABCF3-217ENST00000489719 PLSCR1O15162 318 aa24.51■■□□□ 1.51
ABCF3-217ENST00000489719 NBPF14Q5TI25 921 aa24.51■■□□□ 1.51
ABCF3-217ENST00000489719 DDX54Q8TDD1 881 aaKnown RBP24.51■■□□□ 1.51
ABCF3-217ENST00000489719 NBPF6Q5VWK0 638 aa24.5■■□□□ 1.51
ABCF3-217ENST00000489719 NBPF4Q96M43 638 aa24.5■■□□□ 1.51
ABCF3-217ENST00000489719 BCL9O00512 1426 aa24.5■■□□□ 1.51
ABCF3-217ENST00000489719 R3HDM1Q15032 1099 aaKnown RBP24.49■■□□□ 1.51
ABCF3-217ENST00000489719 EMILIN1Q9Y6C2 1016 aa24.49■■□□□ 1.51
ABCF3-217ENST00000489719 INSRP06213 1382 aa24.49■■□□□ 1.51
ABCF3-217ENST00000489719 FLT4P35916 1363 aa24.49■■□□□ 1.51
ABCF3-217ENST00000489719 KIF24Q5T7B8 1368 aa24.49■■□□□ 1.51
ABCF3-217ENST00000489719 SMG6Q86US8 1419 aaKnown RBP24.49■■□□□ 1.51
ABCF3-217ENST00000489719 LRRC37A3O60309 1634 aa24.48■■□□□ 1.51
ABCF3-217ENST00000489719 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
ABCF3-217ENST00000489719 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
ABCF3-217ENST00000489719 TNNT2P45379 298 aaPredicted RBP24.47■■□□□ 1.51
ABCF3-217ENST00000489719 ACSBG1Q96GR2 724 aa24.47■■□□□ 1.51
ABCF3-217ENST00000489719 KNSTRNQ9Y448 316 aa24.47■■□□□ 1.51
ABCF3-217ENST00000489719 ZCRB1Q8TBF4 217 aaKnown RBP24.46■■□□□ 1.51
ABCF3-217ENST00000489719 RAPGEF4Q8WZA2 1011 aa24.46■■□□□ 1.51
ABCF3-217ENST00000489719 KCNQ2O43526 872 aa24.45■■□□□ 1.5
ABCF3-217ENST00000489719 USHBP1Q8N6Y0 703 aa24.45■■□□□ 1.5
ABCF3-217ENST00000489719 MYOM1P52179 1685 aa24.45■■□□□ 1.5
ABCF3-217ENST00000489719 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
ABCF3-217ENST00000489719 WASHC2AQ641Q2 1341 aa24.43■■□□□ 1.5
ABCF3-217ENST00000489719 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
ABCF3-217ENST00000489719 TNS1Q9HBL0 1735 aaKnown RBP24.43■■□□□ 1.5
ABCF3-217ENST00000489719 KIF7Q2M1P5 1343 aa24.42■■□□□ 1.5
ABCF3-217ENST00000489719 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
ABCF3-217ENST00000489719 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
ABCF3-217ENST00000489719 KIF20BQ96Q89 1820 aa24.4■■□□□ 1.5
ABCF3-217ENST00000489719 PROM2Q8N271 834 aa24.38■■□□□ 1.49
ABCF3-217ENST00000489719 NSD2O96028 1365 aa24.38■■□□□ 1.49
ABCF3-217ENST00000489719 WNK3Q9BYP7 1800 aa24.38■■□□□ 1.49
ABCF3-217ENST00000489719 TXNRD1Q16881 649 aa24.37■■□□□ 1.49
ABCF3-217ENST00000489719 SYTL4Q96C24 671 aaPredicted RBP24.36■■□□□ 1.49
ABCF3-217ENST00000489719 FAM208AQ9UK61 1670 aaKnown RBP24.35■■□□□ 1.49
ABCF3-217ENST00000489719 PRIM1P49642 420 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms