RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 NLRP6P59044 892 aa16.91■□□□□ 0.3
ACTN4-206ENST00000489451 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
ACTN4-206ENST00000489451 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
ACTN4-206ENST00000489451 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
ACTN4-206ENST00000489451 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
ACTN4-206ENST00000489451 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
ACTN4-206ENST00000489451 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
ACTN4-206ENST00000489451 KCNQ2O43526 872 aa16.88■□□□□ 0.29
ACTN4-206ENST00000489451 APBA3O96018 575 aa16.88■□□□□ 0.29
ACTN4-206ENST00000489451 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
ACTN4-206ENST00000489451 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
ACTN4-206ENST00000489451 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
ACTN4-206ENST00000489451 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
ACTN4-206ENST00000489451 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
ACTN4-206ENST00000489451 RGPD3A6NKT7 1758 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-206ENST00000489451 RGPD4Q7Z3J3 1758 aa16.85■□□□□ 0.29
ACTN4-206ENST00000489451 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 OVOS2A0A0G2JMS6 1433 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 OVOS2A0A0J9YW53 1432 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 OVOS2Q6IE36 1432 aa16.84■□□□□ 0.29
ACTN4-206ENST00000489451 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.28
ACTN4-206ENST00000489451 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-206ENST00000489451 ABCC6O95255 1503 aa16.82■□□□□ 0.28
ACTN4-206ENST00000489451 SOX12O15370 315 aa16.82■□□□□ 0.28
ACTN4-206ENST00000489451 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
ACTN4-206ENST00000489451 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
ACTN4-206ENST00000489451 USP31Q70CQ4 1352 aa16.81■□□□□ 0.28
ACTN4-206ENST00000489451 LTN1O94822 1766 aa16.81■□□□□ 0.28
ACTN4-206ENST00000489451 MYOM1P52179 1685 aa16.81■□□□□ 0.28
ACTN4-206ENST00000489451 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
ACTN4-206ENST00000489451 BCL9O00512 1426 aa16.79■□□□□ 0.28
ACTN4-206ENST00000489451 DDB1Q16531 1140 aa16.79■□□□□ 0.28
ACTN4-206ENST00000489451 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
ACTN4-206ENST00000489451 NME9Q86XW9 330 aa16.78■□□□□ 0.28
ACTN4-206ENST00000489451 CARD10Q9BWT7 1032 aa16.78■□□□□ 0.28
ACTN4-206ENST00000489451 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
ACTN4-206ENST00000489451 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
ACTN4-206ENST00000489451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
ACTN4-206ENST00000489451 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
ACTN4-206ENST00000489451 CEP350Q5VT06 3117 aa16.77■□□□□ 0.27
ACTN4-206ENST00000489451 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
ACTN4-206ENST00000489451 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
ACTN4-206ENST00000489451 PROM2Q8N271 834 aa16.75■□□□□ 0.27
ACTN4-206ENST00000489451 TNS2Q63HR2 1409 aa16.75■□□□□ 0.27
ACTN4-206ENST00000489451 EDC4Q6P2E9 1401 aaKnown RBP16.74■□□□□ 0.27
ACTN4-206ENST00000489451 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-206ENST00000489451 PLSCR1O15162 318 aa16.74■□□□□ 0.27
ACTN4-206ENST00000489451 TESK2Q96S53 571 aa16.74■□□□□ 0.27
ACTN4-206ENST00000489451 ERBB3P21860 1342 aa16.73■□□□□ 0.27
ACTN4-206ENST00000489451 NHSQ6T4R5 1651 aa16.73■□□□□ 0.27
ACTN4-206ENST00000489451 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-206ENST00000489451 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-206ENST00000489451 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
ACTN4-206ENST00000489451 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
ACTN4-206ENST00000489451 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
ACTN4-206ENST00000489451 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
ACTN4-206ENST00000489451 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
ACTN4-206ENST00000489451 UTRNP46939 3433 aa16.71■□□□□ 0.27
ACTN4-206ENST00000489451 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
ACTN4-206ENST00000489451 PAPPAQ13219 1627 aa16.68■□□□□ 0.26
ACTN4-206ENST00000489451 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
ACTN4-206ENST00000489451 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-206ENST00000489451 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
ACTN4-206ENST00000489451 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
ACTN4-206ENST00000489451 EXOC5O00471 708 aa16.67■□□□□ 0.26
ACTN4-206ENST00000489451 BTAF1O14981 1849 aa16.67■□□□□ 0.26
ACTN4-206ENST00000489451 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
ACTN4-206ENST00000489451 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
ACTN4-206ENST00000489451 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
ACTN4-206ENST00000489451 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
ACTN4-206ENST00000489451 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
ACTN4-206ENST00000489451 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-206ENST00000489451 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
ACTN4-206ENST00000489451 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
ACTN4-206ENST00000489451 IL2RBP14784 551 aa16.64■□□□□ 0.25
ACTN4-206ENST00000489451 FBLN1P23142 703 aa16.64■□□□□ 0.25
ACTN4-206ENST00000489451 IP6K1Q92551 441 aa16.63■□□□□ 0.25
ACTN4-206ENST00000489451 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
ACTN4-206ENST00000489451 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
ACTN4-206ENST00000489451 PTGER2P43116 358 aa16.61■□□□□ 0.25
ACTN4-206ENST00000489451 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
ACTN4-206ENST00000489451 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
ACTN4-206ENST00000489451 HOXC9P31274 260 aa16.59■□□□□ 0.25
ACTN4-206ENST00000489451 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
ACTN4-206ENST00000489451 USP47Q96K76 1375 aa16.59■□□□□ 0.25
ACTN4-206ENST00000489451 MEGF6O75095 1541 aa16.59■□□□□ 0.25
ACTN4-206ENST00000489451 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
ACTN4-206ENST00000489451 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
ACTN4-206ENST00000489451 LRRC4BQ9NT99 713 aa16.58■□□□□ 0.24
ACTN4-206ENST00000489451 KIF20BQ96Q89 1820 aa16.57■□□□□ 0.24
ACTN4-206ENST00000489451 TUBGCP6Q96RT7 1819 aa16.57■□□□□ 0.24
ACTN4-206ENST00000489451 GPR162Q16538 588 aa16.57■□□□□ 0.24
ACTN4-206ENST00000489451 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
ACTN4-206ENST00000489451 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
ACTN4-206ENST00000489451 NSD2O96028 1365 aa16.56■□□□□ 0.24
ACTN4-206ENST00000489451 COG3Q96JB2 828 aa16.56■□□□□ 0.24
ACTN4-206ENST00000489451 STK32BQ9NY57 414 aa16.56■□□□□ 0.24
ACTN4-206ENST00000489451 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms