RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
LMO4-203ENST00000489303 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
LMO4-203ENST00000489303 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
LMO4-203ENST00000489303 LRP5O75197 1615 aa18.89■□□□□ 0.62
LMO4-203ENST00000489303 SOX12O15370 315 aa18.89■□□□□ 0.61
LMO4-203ENST00000489303 APBA3O96018 575 aa18.89■□□□□ 0.61
LMO4-203ENST00000489303 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
LMO4-203ENST00000489303 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
LMO4-203ENST00000489303 AKAP12Q02952 1782 aa18.88■□□□□ 0.61
LMO4-203ENST00000489303 CRB1P82279 1406 aa18.87■□□□□ 0.61
LMO4-203ENST00000489303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
LMO4-203ENST00000489303 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
LMO4-203ENST00000489303 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
LMO4-203ENST00000489303 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
LMO4-203ENST00000489303 PTF1AQ7RTS3 328 aa18.85■□□□□ 0.61
LMO4-203ENST00000489303 TOM1L2Q6ZVM7 507 aa18.84■□□□□ 0.61
LMO4-203ENST00000489303 THRAP3Q9Y2W1 955 aaKnown RBP18.84■□□□□ 0.61
LMO4-203ENST00000489303 RREB1Q92766 1687 aa18.84■□□□□ 0.61
LMO4-203ENST00000489303 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
LMO4-203ENST00000489303 PEAK1Q9H792 1746 aa18.83■□□□□ 0.61
LMO4-203ENST00000489303 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.6
LMO4-203ENST00000489303 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.6
LMO4-203ENST00000489303 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.6
LMO4-203ENST00000489303 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.6
LMO4-203ENST00000489303 A0A1W2PP64 1363 aa18.82■□□□□ 0.6
LMO4-203ENST00000489303 NME9Q86XW9 330 aa18.81■□□□□ 0.6
LMO4-203ENST00000489303 USP31Q70CQ4 1352 aa18.81■□□□□ 0.6
LMO4-203ENST00000489303 NFAT5O94916 1531 aa18.8■□□□□ 0.6
LMO4-203ENST00000489303 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
LMO4-203ENST00000489303 WNK3Q9BYP7 1800 aa18.8■□□□□ 0.6
LMO4-203ENST00000489303 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
LMO4-203ENST00000489303 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
LMO4-203ENST00000489303 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
LMO4-203ENST00000489303 DDB1Q16531 1140 aa18.78■□□□□ 0.6
LMO4-203ENST00000489303 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
LMO4-203ENST00000489303 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
LMO4-203ENST00000489303 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
LMO4-203ENST00000489303 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
LMO4-203ENST00000489303 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
LMO4-203ENST00000489303 PARD3Q8TEW0 1356 aa18.76■□□□□ 0.59
LMO4-203ENST00000489303 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
LMO4-203ENST00000489303 COG3Q96JB2 828 aa18.75■□□□□ 0.59
LMO4-203ENST00000489303 HSPA5P11021 654 aaKnown RBP18.73■□□□□ 0.59
LMO4-203ENST00000489303 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
LMO4-203ENST00000489303 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
LMO4-203ENST00000489303 PROM2Q8N271 834 aa18.72■□□□□ 0.59
LMO4-203ENST00000489303 ANO8Q9HCE9 1232 aaPredicted RBP18.72■□□□□ 0.59
LMO4-203ENST00000489303 LTN1O94822 1766 aa18.7■□□□□ 0.58
LMO4-203ENST00000489303 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
LMO4-203ENST00000489303 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
LMO4-203ENST00000489303 KCNQ2O43526 872 aa18.69■□□□□ 0.58
LMO4-203ENST00000489303 NBPF14Q5TI25 921 aa18.69■□□□□ 0.58
LMO4-203ENST00000489303 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
LMO4-203ENST00000489303 PLSCR1O15162 318 aa18.68■□□□□ 0.58
LMO4-203ENST00000489303 FBLN1P23142 703 aa18.68■□□□□ 0.58
LMO4-203ENST00000489303 ABCC6O95255 1503 aa18.68■□□□□ 0.58
LMO4-203ENST00000489303 FYB1O15117 783 aa18.67■□□□□ 0.58
LMO4-203ENST00000489303 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
LMO4-203ENST00000489303 ERBB3P21860 1342 aa18.67■□□□□ 0.58
LMO4-203ENST00000489303 EXOC5O00471 708 aa18.66■□□□□ 0.58
LMO4-203ENST00000489303 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
LMO4-203ENST00000489303 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
LMO4-203ENST00000489303 RGPD3A6NKT7 1758 aaPredicted RBP18.65■□□□□ 0.58
LMO4-203ENST00000489303 RGPD4Q7Z3J3 1758 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 AMPHP49418 695 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 BCL9O00512 1426 aa18.65■□□□□ 0.58
LMO4-203ENST00000489303 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
LMO4-203ENST00000489303 IP6K1Q92551 441 aa18.64■□□□□ 0.57
LMO4-203ENST00000489303 TNS2Q63HR2 1409 aa18.64■□□□□ 0.57
LMO4-203ENST00000489303 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
LMO4-203ENST00000489303 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
LMO4-203ENST00000489303 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
LMO4-203ENST00000489303 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
LMO4-203ENST00000489303 CASZ1Q86V15 1759 aa18.62■□□□□ 0.57
LMO4-203ENST00000489303 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
LMO4-203ENST00000489303 MAP3K19Q56UN5 1328 aa18.61■□□□□ 0.57
LMO4-203ENST00000489303 IL2RBP14784 551 aa18.6■□□□□ 0.57
LMO4-203ENST00000489303 SPON1Q9HCB6 807 aa18.6■□□□□ 0.57
LMO4-203ENST00000489303 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
LMO4-203ENST00000489303 ZBTB7AO95365 584 aa18.59■□□□□ 0.57
LMO4-203ENST00000489303 HOXC9P31274 260 aa18.59■□□□□ 0.57
LMO4-203ENST00000489303 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
LMO4-203ENST00000489303 RGPD2P0DJD1 1756 aa18.58■□□□□ 0.56
LMO4-203ENST00000489303 RTL1A6NKG5 1358 aa18.57■□□□□ 0.56
LMO4-203ENST00000489303 MYOM1P52179 1685 aa18.57■□□□□ 0.56
LMO4-203ENST00000489303 PANK3Q9H999 370 aa18.57■□□□□ 0.56
LMO4-203ENST00000489303 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
LMO4-203ENST00000489303 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
LMO4-203ENST00000489303 BTAF1O14981 1849 aa18.55■□□□□ 0.56
LMO4-203ENST00000489303 PTGER2P43116 358 aa18.54■□□□□ 0.56
LMO4-203ENST00000489303 SLC15A2Q16348 729 aa18.54■□□□□ 0.56
LMO4-203ENST00000489303 DDX54Q8TDD1 881 aaKnown RBP18.54■□□□□ 0.56
LMO4-203ENST00000489303 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
LMO4-203ENST00000489303 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
LMO4-203ENST00000489303 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
LMO4-203ENST00000489303 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
LMO4-203ENST00000489303 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms