RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.43
COL16A1-215ENST00000488897 MARF1Q9Y4F3 1742 aaKnown RBP23.95■■□□□ 1.42
COL16A1-215ENST00000488897 CDCA7LQ96GN5 454 aa23.95■■□□□ 1.42
COL16A1-215ENST00000488897 OVOS2A0A0J9YW53 1432 aa23.94■■□□□ 1.42
COL16A1-215ENST00000488897 OVOS2Q6IE36 1432 aa23.94■■□□□ 1.42
COL16A1-215ENST00000488897 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
COL16A1-215ENST00000488897 PPP2R1AP30153 589 aa23.92■■□□□ 1.42
COL16A1-215ENST00000488897 MTHFSP49914 203 aa23.92■■□□□ 1.42
COL16A1-215ENST00000488897 POLKQ9UBT6 870 aa23.92■■□□□ 1.42
COL16A1-215ENST00000488897 LTV1Q96GA3 475 aaPredicted RBP23.91■■□□□ 1.42
COL16A1-215ENST00000488897 AXIN2Q9Y2T1 843 aa23.91■■□□□ 1.42
COL16A1-215ENST00000488897 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
COL16A1-215ENST00000488897 KIAA0232Q92628 1395 aa23.89■■□□□ 1.42
COL16A1-215ENST00000488897 HSP90AB2PQ58FF8 381 aa23.89■■□□□ 1.42
COL16A1-215ENST00000488897 ZBTB47Q9UFB7 747 aaPredicted RBP23.89■■□□□ 1.42
COL16A1-215ENST00000488897 ARHGEF10O15013 1369 aa23.89■■□□□ 1.41
COL16A1-215ENST00000488897 MS4A1P11836 297 aa23.89■■□□□ 1.41
COL16A1-215ENST00000488897 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
COL16A1-215ENST00000488897 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
COL16A1-215ENST00000488897 USP19O94966 1318 aa23.88■■□□□ 1.41
COL16A1-215ENST00000488897 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
COL16A1-215ENST00000488897 JCADQ9P266 1359 aa23.85■■□□□ 1.41
COL16A1-215ENST00000488897 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
COL16A1-215ENST00000488897 ADAMTS8Q9UP79 889 aa23.85■■□□□ 1.41
COL16A1-215ENST00000488897 AMPHP49418 695 aa23.84■■□□□ 1.41
COL16A1-215ENST00000488897 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
COL16A1-215ENST00000488897 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
COL16A1-215ENST00000488897 LRP6O75581 1613 aa23.83■■□□□ 1.4
COL16A1-215ENST00000488897 WDR43Q15061 677 aaKnown RBP eCLIP23.82■■□□□ 1.4
COL16A1-215ENST00000488897 NPC1L1Q9UHC9 1359 aa23.82■■□□□ 1.4
COL16A1-215ENST00000488897 PDE4AP27815 886 aa23.82■■□□□ 1.4
COL16A1-215ENST00000488897 NSD2O96028 1365 aa23.82■■□□□ 1.4
COL16A1-215ENST00000488897 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
COL16A1-215ENST00000488897 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
COL16A1-215ENST00000488897 NFAT5O94916 1531 aa23.81■■□□□ 1.4
COL16A1-215ENST00000488897 STRN4Q9NRL3 753 aa23.81■■□□□ 1.4
COL16A1-215ENST00000488897 PLIN1O60240 522 aa23.8■■□□□ 1.4
COL16A1-215ENST00000488897 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
COL16A1-215ENST00000488897 CRYBG1Q9Y4K1 1723 aa23.8■■□□□ 1.4
COL16A1-215ENST00000488897 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 HOXC9P31274 260 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 USHBP1Q8N6Y0 703 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 CRBNQ96SW2 442 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 BTG4Q9NY30 223 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
COL16A1-215ENST00000488897 SLIT3O75094 1523 aa23.78■■□□□ 1.4
COL16A1-215ENST00000488897 ABCA3Q99758 1704 aa23.78■■□□□ 1.4
COL16A1-215ENST00000488897 LTN1O94822 1766 aa23.77■■□□□ 1.4
COL16A1-215ENST00000488897 MEX3CQ5U5Q3 659 aaKnown RBP23.77■■□□□ 1.4
COL16A1-215ENST00000488897 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
COL16A1-215ENST00000488897 RGPD5Q99666 1765 aa23.77■■□□□ 1.4
COL16A1-215ENST00000488897 DEKP35659 375 aaKnown RBP23.76■■□□□ 1.39
COL16A1-215ENST00000488897 NBR1Q14596 966 aa23.76■■□□□ 1.39
COL16A1-215ENST00000488897 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
COL16A1-215ENST00000488897 ZNF521Q96K83 1311 aa23.73■■□□□ 1.39
COL16A1-215ENST00000488897 U2SURPO15042 1029 aaKnown RBP23.73■■□□□ 1.39
COL16A1-215ENST00000488897 EIF4A2Q14240 407 aaKnown RBP23.73■■□□□ 1.39
COL16A1-215ENST00000488897 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
COL16A1-215ENST00000488897 GOLGA2Q08379 1002 aa23.72■■□□□ 1.39
COL16A1-215ENST00000488897 IP6K1Q92551 441 aa23.72■■□□□ 1.39
COL16A1-215ENST00000488897 COL22A1Q8NFW1 1626 aaPredicted RBP23.72■■□□□ 1.39
COL16A1-215ENST00000488897 AATKQ6ZMQ8 1374 aa23.72■■□□□ 1.39
COL16A1-215ENST00000488897 CAMTA1Q9Y6Y1 1673 aa23.71■■□□□ 1.39
COL16A1-215ENST00000488897 HMOX1P09601 288 aa23.71■■□□□ 1.39
COL16A1-215ENST00000488897 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
COL16A1-215ENST00000488897 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
COL16A1-215ENST00000488897 ANKRD24Q8TF21 1146 aa23.71■■□□□ 1.39
COL16A1-215ENST00000488897 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.38
COL16A1-215ENST00000488897 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.7■■□□□ 1.38
COL16A1-215ENST00000488897 SPATA31A6Q5VVP1 1343 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 AEBP1Q8IUX7 1158 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 USP54Q70EL1 1684 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 EVA1CP58658 441 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
COL16A1-215ENST00000488897 NBPF6Q5VWK0 638 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 NBPF4Q96M43 638 aa23.69■■□□□ 1.38
COL16A1-215ENST00000488897 FLT4P35916 1363 aa23.67■■□□□ 1.38
COL16A1-215ENST00000488897 NLRP2Q9NX02 1062 aa23.67■■□□□ 1.38
COL16A1-215ENST00000488897 CCDC9Q9Y3X0 531 aaKnown RBP23.67■■□□□ 1.38
COL16A1-215ENST00000488897 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
COL16A1-215ENST00000488897 IL13P35225 146 aa23.66■■□□□ 1.38
COL16A1-215ENST00000488897 C20orf194Q5TEA3 1177 aa23.66■■□□□ 1.38
COL16A1-215ENST00000488897 EYA1Q99502 592 aa23.66■■□□□ 1.38
COL16A1-215ENST00000488897 RGPD2P0DJD1 1756 aa23.66■■□□□ 1.38
COL16A1-215ENST00000488897 CPDO75976 1380 aa23.66■■□□□ 1.38
COL16A1-215ENST00000488897 SLFN5Q08AF3 891 aa23.65■■□□□ 1.38
COL16A1-215ENST00000488897 CCDC146Q8IYE0 955 aa23.65■■□□□ 1.38
COL16A1-215ENST00000488897 EP400Q96L91 3159 aa23.65■■□□□ 1.38
COL16A1-215ENST00000488897 AFF2P51816 1311 aa23.65■■□□□ 1.38
COL16A1-215ENST00000488897 COL18A1P39060 1754 aa23.65■■□□□ 1.38
COL16A1-215ENST00000488897 CENPQQ7L2Z9 268 aaPredicted RBP23.64■■□□□ 1.38
COL16A1-215ENST00000488897 ERBB3P21860 1342 aa23.64■■□□□ 1.38
COL16A1-215ENST00000488897 U2AF1L5P0DN76 240 aaPredicted RBP23.64■■□□□ 1.37
COL16A1-215ENST00000488897 U2AF1Q01081 240 aaKnown RBP eCLIP23.64■■□□□ 1.37
COL16A1-215ENST00000488897 KDM2BQ8NHM5 1336 aa23.64■■□□□ 1.37
COL16A1-215ENST00000488897 TOM1L2Q6ZVM7 507 aa23.63■■□□□ 1.37
COL16A1-215ENST00000488897 USP21Q9UK80 565 aa23.63■■□□□ 1.37
COL16A1-215ENST00000488897 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
COL16A1-215ENST00000488897 NGEFQ8N5V2 710 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms